| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041719
Identifier: 159041719
GI number: 159041719
Start: 1210882
End: 1211235
Strand: Reverse
Name: 159041719
Synonym: Cmaq_1154
Alternate gene names: NA
Gene position: 1211235-1210882 (Counterclockwise)
Preceding gene: 159041724
Following gene: 159041718
Centisome position: 58.3
GC content: 42.66
Gene sequence:
>354_bases ATGAATAGTGAGGAGCTAGCTAGATTAATGGAGATTCTTGAGAACACACTGCTCGTTAAGCTTAATGACGACTACGCGGT TAGGATAATGGATTACGTTGGCCCTGGGGAACATGACTACACAGTGGTGCCTATATTATATAAGTTGGGTGATTCCAAGC TTCTTGAGGTTTGGATTGAGGTTGATGCTAAGCAGTATAGGATTGCCCTCATAAGTGAGGTTGATGAGCACTTGAAGGCT GTTGGGGGTTGGTTAACTAGGGGTGAGTTCCTGGTGTTGTTTAATGATGGTTTAGTTAAGATAAGCATACCTAAGGATAG TGAACCCTTTAGGGGCTTTATTAAGCCTGGTTAA
Upstream 100 bases:
>100_bases CCGTTAACCTATAGTCCATGGTAGTGGGATAAATATCCTACTTTTAAGCATTACCCCAATGGCGAAAACAAAATAAACAA TAACCCAGCATTAGGCTTTA
Downstream 100 bases:
>100_bases CCATGGTTTAAACTTAATAACGCTAATCCTTAATGCGGCTCAATGGTTAGTAAGGCATCAGCCGTGGTTAACATAATGAT CGCCAGATTCATATACAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MNSEELARLMEILENTLLVKLNDDYAVRIMDYVGPGEHDYTVVPILYKLGDSKLLEVWIEVDAKQYRIALISEVDEHLKA VGGWLTRGEFLVLFNDGLVKISIPKDSEPFRGFIKPG
Sequences:
>Translated_117_residues MNSEELARLMEILENTLLVKLNDDYAVRIMDYVGPGEHDYTVVPILYKLGDSKLLEVWIEVDAKQYRIALISEVDEHLKA VGGWLTRGEFLVLFNDGLVKISIPKDSEPFRGFIKPG >Mature_117_residues MNSEELARLMEILENTLLVKLNDDYAVRIMDYVGPGEHDYTVVPILYKLGDSKLLEVWIEVDAKQYRIALISEVDEHLKA VGGWLTRGEFLVLFNDGLVKISIPKDSEPFRGFIKPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13323; Mature: 13323
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSEELARLMEILENTLLVKLNDDYAVRIMDYVGPGEHDYTVVPILYKLGDSKLLEVWIE CCHHHHHHHHHHHCCEEEEEECCCEEEEEEECCCCCCCCEEEEEEEEECCCCCEEEEEEE VDAKQYRIALISEVDEHLKAVGGWLTRGEFLVLFNDGLVKISIPKDSEPFRGFIKPG ECCCCEEHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MNSEELARLMEILENTLLVKLNDDYAVRIMDYVGPGEHDYTVVPILYKLGDSKLLEVWIE CCHHHHHHHHHHHCCEEEEEECCCEEEEEEECCCCCCCCEEEEEEEEECCCCCEEEEEEE VDAKQYRIALISEVDEHLKAVGGWLTRGEFLVLFNDGLVKISIPKDSEPFRGFIKPG ECCCCEEHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA