Definition Caldivirga maquilingensis IC-167 chromosome, complete genome.
Accession NC_009954
Length 2,077,567

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The map label for this gene is yecE [C]

Identifier: 159041699

GI number: 159041699

Start: 1191168

End: 1191863

Strand: Reverse

Name: yecE [C]

Synonym: Cmaq_1134

Alternate gene names: 159041699

Gene position: 1191863-1191168 (Counterclockwise)

Preceding gene: 159041701

Following gene: 159041697

Centisome position: 57.37

GC content: 39.08

Gene sequence:

>696_bases
ATGGAAATTTACGTAGGCACCTCAGGTTGGTTATATGATTGGAATAAGGGGCGTTCACTGGATTGGTACGTTAAGTATAG
TGGGTTGAATGCAGTTGAGTTGAATTCATCATTCTATAGGTTACCTAAACCCACTATGGTTAATTCATGGGCTAGTAAGG
CTTCAGCATTAAGATGGTCTATTAAGGCTTATAGGTACATTAGCCATGTGGCTAAGCTTAGCGGTAATGCCCCTGAATGG
TGGCGTAAGATGATTGAGTTATTTAAGCCGCTTAACAATAGCATCGACTTCTACTTAATTCAACTACCTCCATCATTCAA
GTACAGTAGCGATAACTTAAGTAGACTTCACGACTTCATAAGTGAAATAGGAGGTGGTGAGAGAATTGCGGTTGAGTTTA
GGGAGCGCGGTTGGTTTAATGATAGCGTGGTTAATTCAATTAATGAACTTGAAGTCACAATGGTATCCATAGACTCCCCT
GAAATTAAGTGGATAGGATCAAGTAATGGTGTTGTTTACTTGAGGATGCATGGGAGGAGTAATTGGTACTTCCACAATTA
CAGTGAGGGTGAATTAATTGAGGTGGCTAAGGTTATTAAATCCCTTAATCCAATTAAGGTTTACGTATTCTTTAATAATG
ACCACTGGATGCTGGAGAACGCTAAGGCAATGTTAAGCATTTTAAGAAACCTTTAA

Upstream 100 bases:

>100_bases
TAAAGACTACACACTGAAGGTGGCCTTATATTAATTAGTATGAAACTCCACGTCCATATACCTTAAAAGGCTGAATCCTG
GTTACTGCATTGGTGATTAA

Downstream 100 bases:

>100_bases
TCTTAGTTAAACACCAGGTCATTGCCGTAAGGCACTGCTTAAGTTATGGTTAGGCATAAGCTAGTACCCACTATTAAGCG
GTATCAATGTTGCTGCAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MEIYVGTSGWLYDWNKGRSLDWYVKYSGLNAVELNSSFYRLPKPTMVNSWASKASALRWSIKAYRYISHVAKLSGNAPEW
WRKMIELFKPLNNSIDFYLIQLPPSFKYSSDNLSRLHDFISEIGGGERIAVEFRERGWFNDSVVNSINELEVTMVSIDSP
EIKWIGSSNGVVYLRMHGRSNWYFHNYSEGELIEVAKVIKSLNPIKVYVFFNNDHWMLENAKAMLSILRNL

Sequences:

>Translated_231_residues
MEIYVGTSGWLYDWNKGRSLDWYVKYSGLNAVELNSSFYRLPKPTMVNSWASKASALRWSIKAYRYISHVAKLSGNAPEW
WRKMIELFKPLNNSIDFYLIQLPPSFKYSSDNLSRLHDFISEIGGGERIAVEFRERGWFNDSVVNSINELEVTMVSIDSP
EIKWIGSSNGVVYLRMHGRSNWYFHNYSEGELIEVAKVIKSLNPIKVYVFFNNDHWMLENAKAMLSILRNL
>Mature_231_residues
MEIYVGTSGWLYDWNKGRSLDWYVKYSGLNAVELNSSFYRLPKPTMVNSWASKASALRWSIKAYRYISHVAKLSGNAPEW
WRKMIELFKPLNNSIDFYLIQLPPSFKYSSDNLSRLHDFISEIGGGERIAVEFRERGWFNDSVVNSINELEVTMVSIDSP
EIKWIGSSNGVVYLRMHGRSNWYFHNYSEGELIEVAKVIKSLNPIKVYVFFNNDHWMLENAKAMLSILRNL

Specific function: Unknown

COG id: COG1801

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26927; Mature: 26927

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIYVGTSGWLYDWNKGRSLDWYVKYSGLNAVELNSSFYRLPKPTMVNSWASKASALRWS
CEEEEECCCCEEECCCCCCEEEEEEECCCCEEEECCCEEECCCCHHHHHHHHHHHHHHHH
IKAYRYISHVAKLSGNAPEWWRKMIELFKPLNNSIDFYLIQLPPSFKYSSDNLSRLHDFI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHH
SEIGGGERIAVEFRERGWFNDSVVNSINELEVTMVSIDSPEIKWIGSSNGVVYLRMHGRS
HHHCCCCEEEEEEECCCCCCHHHHCCCCCEEEEEEEECCCCEEEEECCCCEEEEEEECCC
NWYFHNYSEGELIEVAKVIKSLNPIKVYVFFNNDHWMLENAKAMLSILRNL
CEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCEEEEHHHHHHHHHHHCC
>Mature Secondary Structure
MEIYVGTSGWLYDWNKGRSLDWYVKYSGLNAVELNSSFYRLPKPTMVNSWASKASALRWS
CEEEEECCCCEEECCCCCCEEEEEEECCCCEEEECCCEEECCCCHHHHHHHHHHHHHHHH
IKAYRYISHVAKLSGNAPEWWRKMIELFKPLNNSIDFYLIQLPPSFKYSSDNLSRLHDFI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHH
SEIGGGERIAVEFRERGWFNDSVVNSINELEVTMVSIDSPEIKWIGSSNGVVYLRMHGRS
HHHCCCCEEEEEEECCCCCCHHHHCCCCCEEEEEEEECCCCEEEEECCCCEEEEEEECCC
NWYFHNYSEGELIEVAKVIKSLNPIKVYVFFNNDHWMLENAKAMLSILRNL
CEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCEEEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA