| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is nadE [H]
Identifier: 159041674
GI number: 159041674
Start: 1167198
End: 1168055
Strand: Reverse
Name: nadE [H]
Synonym: Cmaq_1108
Alternate gene names: 159041674
Gene position: 1168055-1167198 (Counterclockwise)
Preceding gene: 159041676
Following gene: 159041672
Centisome position: 56.22
GC content: 45.57
Gene sequence:
>858_bases ATGCAGCCTTGGATTACCCTTGATAGGATACTGAACGTTAATTACGATTACATTGAAAGAAGGATAGTGGACTTCATAAG AACATACGTAAACAGCGTGGGCGCTAAGGGTGCTGTTATAGGGCTTAGTGGTGGTATTGACTCAAGTGTAACCGCATCAC TGCTGGTTAGGGCTTTAGGTAAGGATAAGGTCCTAGCCTTAATAATGCCATACAAGACAACGCCGCCTGAGGATGTTAAG GACGCTATTCAACTAGCCCAGATGCTGGGTGTAAAGTATGATGTTGTTAACATAGACCCCATTAGGGCATCATTCTCAAG CACAATACCTGCCTTCAAGGAAAGTGAAATTGTTGCTAACGGCAACATACTGGCTAGAATAAGGATGACGATACTGTACT ACTACGCCAACCTAAACAACATGATTGTCGCCGGTACCGGGGATAAGAGTGAGTTATTGATAGGCTACTTCACTAAGTAT GGTGATGGCGGTGTTGATATATTGCCAATAGGGGATGTGTATAAGAGTCAAGTTAGAATGCTTGGGAGGCGTTTAGGCTT ACCTGACTCAATAGTCACGAAACCCTCAAGCCCACGCCTATGGGAAGGTCAGACCGCTGAGGGTGAATTGGGTGTTAGTT ACGCTGATATTGATGTTATCCTCCATGCGTTAGTTGACTTAAGGATGAATCCACAGAAGGCTCAGGAGGCCACTGGGAAG CCTCTTAACCTTATTGAACAGGTATGGAGGAGAGTGGTTACAACTGAGCATAAGCGTAGAACCCCAGTGGTGCCTAGGAT TGGGTTAAGGACTATTGGGCTTGACTGGCGTATGCCGGTTCACTACAATGGCTACTAA
Upstream 100 bases:
>100_bases AATACACCTAATAATACTTAGGTTTAAGCACAACGTATGACTATTGATTCCGTTAACCTTAAGACGAAAGCGTTAATTAG GCTAGGTGGCGTGACCTATT
Downstream 100 bases:
>100_bases GGTAAGGCTTCTAATACACCTCATCAATATTTAGGCGCAGTGATTCATAACTATGAACCTAATTTTATAAATACATGCCT TACCTTAGTTTTAACACTAT
Product: NAD+ synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MQPWITLDRILNVNYDYIERRIVDFIRTYVNSVGAKGAVIGLSGGIDSSVTASLLVRALGKDKVLALIMPYKTTPPEDVK DAIQLAQMLGVKYDVVNIDPIRASFSSTIPAFKESEIVANGNILARIRMTILYYYANLNNMIVAGTGDKSELLIGYFTKY GDGGVDILPIGDVYKSQVRMLGRRLGLPDSIVTKPSSPRLWEGQTAEGELGVSYADIDVILHALVDLRMNPQKAQEATGK PLNLIEQVWRRVVTTEHKRRTPVVPRIGLRTIGLDWRMPVHYNGY
Sequences:
>Translated_285_residues MQPWITLDRILNVNYDYIERRIVDFIRTYVNSVGAKGAVIGLSGGIDSSVTASLLVRALGKDKVLALIMPYKTTPPEDVK DAIQLAQMLGVKYDVVNIDPIRASFSSTIPAFKESEIVANGNILARIRMTILYYYANLNNMIVAGTGDKSELLIGYFTKY GDGGVDILPIGDVYKSQVRMLGRRLGLPDSIVTKPSSPRLWEGQTAEGELGVSYADIDVILHALVDLRMNPQKAQEATGK PLNLIEQVWRRVVTTEHKRRTPVVPRIGLRTIGLDWRMPVHYNGY >Mature_285_residues MQPWITLDRILNVNYDYIERRIVDFIRTYVNSVGAKGAVIGLSGGIDSSVTASLLVRALGKDKVLALIMPYKTTPPEDVK DAIQLAQMLGVKYDVVNIDPIRASFSSTIPAFKESEIVANGNILARIRMTILYYYANLNNMIVAGTGDKSELLIGYFTKY GDGGVDILPIGDVYKSQVRMLGRRLGLPDSIVTKPSSPRLWEGQTAEGELGVSYADIDVILHALVDLRMNPQKAQEATGK PLNLIEQVWRRVVTTEHKRRTPVVPRIGLRTIGLDWRMPVHYNGY
Specific function: This NAD Synthase Uses Nh(3) In Preference To Glutamine. [C]
COG id: COG0171
COG function: function code H; NAD synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD synthetase family [H]
Homologues:
Organism=Homo sapiens, GI41393551, Length=264, Percent_Identity=28.4090909090909, Blast_Score=78, Evalue=8e-15, Organism=Escherichia coli, GI1788036, Length=275, Percent_Identity=30.1818181818182, Blast_Score=97, Evalue=9e-22,
Paralogues:
None
Copy number: 100 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022310 - InterPro: IPR003694 - InterPro: IPR022926 - InterPro: IPR014729 [H]
Pfam domain/function: PF02540 NAD_synthase [H]
EC number: =6.3.1.5 [H]
Molecular weight: Translated: 31718; Mature: 31718
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPWITLDRILNVNYDYIERRIVDFIRTYVNSVGAKGAVIGLSGGIDSSVTASLLVRALG CCCCEEHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHC KDKVLALIMPYKTTPPEDVKDAIQLAQMLGVKYDVVNIDPIRASFSSTIPAFKESEIVAN CCCEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHCCCCCCCCCEEEC GNILARIRMTILYYYANLNNMIVAGTGDKSELLIGYFTKYGDGGVDILPIGDVYKSQVRM CCCHHHHHHHHHHHEECCCCEEEEECCCCCCEEEEEEECCCCCCEEEEECCHHHHHHHHH LGRRLGLPDSIVTKPSSPRLWEGQTAEGELGVSYADIDVILHALVDLRMNPQKAQEATGK HHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCC PLNLIEQVWRRVVTTEHKRRTPVVPRIGLRTIGLDWRMPVHYNGY CHHHHHHHHHHHHCCCHHCCCCCCCCCCCEEECCCEECCEEECCC >Mature Secondary Structure MQPWITLDRILNVNYDYIERRIVDFIRTYVNSVGAKGAVIGLSGGIDSSVTASLLVRALG CCCCEEHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHC KDKVLALIMPYKTTPPEDVKDAIQLAQMLGVKYDVVNIDPIRASFSSTIPAFKESEIVAN CCCEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHCCCCCCCCCEEEC GNILARIRMTILYYYANLNNMIVAGTGDKSELLIGYFTKYGDGGVDILPIGDVYKSQVRM CCCHHHHHHHHHHHEECCCCEEEEECCCCCCEEEEEEECCCCCCEEEEECCHHHHHHHHH LGRRLGLPDSIVTKPSSPRLWEGQTAEGELGVSYADIDVILHALVDLRMNPQKAQEATGK HHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCC PLNLIEQVWRRVVTTEHKRRTPVVPRIGLRTIGLDWRMPVHYNGY CHHHHHHHHHHHHCCCHHCCCCCCCCCCCEEECCCEECCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA