| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041662
Identifier: 159041662
GI number: 159041662
Start: 1153701
End: 1154630
Strand: Reverse
Name: 159041662
Synonym: Cmaq_1096
Alternate gene names: NA
Gene position: 1154630-1153701 (Counterclockwise)
Preceding gene: 159041663
Following gene: 159041659
Centisome position: 55.58
GC content: 42.04
Gene sequence:
>930_bases ATGGTTGAGGTTACTATTAGGGATTTAACCAGTAGGGTTAGTCTCGTAGGTACGTATTACGGTGATGTTGAGTTAAACAT GGTTTACGTAAAGGATAGTGGAGTATTACTCGATACATCAACCTCAAGCATAATTGAGGATGTGGTTAAGGTAATAGGGC TACCTAAGGTGGCTATAATAACGCATCCCCATGAGGATCATGCAGGTGGAAGCGGTTACTTAGCCAGTAGGGGTGTTAGG GTGATTGCGCATGAGGCTGCCAGAGGGTTCTTATACAATAATGTCATTAACGTGGATTCCTTCTTCTCACTTAAATATAG GTCATGCTTCACCCCTGAATTCACGGAATCCTTCATAAGAGACTTTAGGAGTAAAGTTGGTTCACCAGTGGTTCACGAAT CCTTTAGAGGTATGCTTAATTTAAATGGCGTTAAGTGTATTGAAGCCTTCGGCCACACTTCAGGTACTGTGGTGTGTATT GTGGATGATGTAATGTTTACATCAGACGCAGTGCAGGGTTTAGGCATAAGGGGGTTGAGTACAACAGATTCAATACCACA GGTTTCATCGATTGACGATTACTTACAGACACTGAATACGCTTAAGAGTATTAAGGTTAAGATGCTTGTACCAGGGCATA ATTACCTACCATTCTCCAAGAGGGTTCTTGAGGGGAATGAAGTTGAAGAATTTATTGAAGCCTCAATTGAGGCTATGAAT AGGCTACTGGGGATAGCCAAGGTACTCCTCAGTGAAAGACCATTAACAATCTGCGAGTTTGCGGATAACCTGATACATGA GTATGGGGTTAAGAGGAGCCTGTACCCACAGGCCTTAATAACAGCCAACGCTATAATAAGATTCTATAAGAGGAGGAGGC TGCTTAGGATTATTAAGGAGGGTGATGTTGAACTTTACTCAATTAAGTGA
Upstream 100 bases:
>100_bases TTTAAACAGCTTCAATAATTAACCTTAATGAGACGCCTACGTAATGAGGAATAATATATTAATGGTGTAATACTTTAAAT ATCACACCTAGGCTTAGGGT
Downstream 100 bases:
>100_bases ATCACCATACTGCACATCACTAGTAATTTAATCTCATGATAAACTGCAGTAACACTTAATTTCCCTACTTAATAAATAGA GTGATTAGAAGTAGGCGAGC
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: Beta-Lactamase Domain-Containing Protein
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MVEVTIRDLTSRVSLVGTYYGDVELNMVYVKDSGVLLDTSTSSIIEDVVKVIGLPKVAIITHPHEDHAGGSGYLASRGVR VIAHEAARGFLYNNVINVDSFFSLKYRSCFTPEFTESFIRDFRSKVGSPVVHESFRGMLNLNGVKCIEAFGHTSGTVVCI VDDVMFTSDAVQGLGIRGLSTTDSIPQVSSIDDYLQTLNTLKSIKVKMLVPGHNYLPFSKRVLEGNEVEEFIEASIEAMN RLLGIAKVLLSERPLTICEFADNLIHEYGVKRSLYPQALITANAIIRFYKRRRLLRIIKEGDVELYSIK
Sequences:
>Translated_309_residues MVEVTIRDLTSRVSLVGTYYGDVELNMVYVKDSGVLLDTSTSSIIEDVVKVIGLPKVAIITHPHEDHAGGSGYLASRGVR VIAHEAARGFLYNNVINVDSFFSLKYRSCFTPEFTESFIRDFRSKVGSPVVHESFRGMLNLNGVKCIEAFGHTSGTVVCI VDDVMFTSDAVQGLGIRGLSTTDSIPQVSSIDDYLQTLNTLKSIKVKMLVPGHNYLPFSKRVLEGNEVEEFIEASIEAMN RLLGIAKVLLSERPLTICEFADNLIHEYGVKRSLYPQALITANAIIRFYKRRRLLRIIKEGDVELYSIK >Mature_309_residues MVEVTIRDLTSRVSLVGTYYGDVELNMVYVKDSGVLLDTSTSSIIEDVVKVIGLPKVAIITHPHEDHAGGSGYLASRGVR VIAHEAARGFLYNNVINVDSFFSLKYRSCFTPEFTESFIRDFRSKVGSPVVHESFRGMLNLNGVKCIEAFGHTSGTVVCI VDDVMFTSDAVQGLGIRGLSTTDSIPQVSSIDDYLQTLNTLKSIKVKMLVPGHNYLPFSKRVLEGNEVEEFIEASIEAMN RLLGIAKVLLSERPLTICEFADNLIHEYGVKRSLYPQALITANAIIRFYKRRRLLRIIKEGDVELYSIK
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34403; Mature: 34403
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEVTIRDLTSRVSLVGTYYGDVELNMVYVKDSGVLLDTSTSSIIEDVVKVIGLPKVAII CEEEEHHHHHHHHHHHEEEECCEEEEEEEEECCCEEEECCHHHHHHHHHHHHCCCCEEEE THPHEDHAGGSGYLASRGVRVIAHEAARGFLYNNVINVDSFFSLKYRSCFTPEFTESFIR ECCCCCCCCCCCCHHHCCCCEEEHHHHHHHHHHCEECCCHHHEEHHHCCCCHHHHHHHHH DFRSKVGSPVVHESFRGMLNLNGVKCIEAFGHTSGTVVCIVDDVMFTSDAVQGLGIRGLS HHHHHHCCCHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEEEECHHHHHHHHHCCCCCCCC TTDSIPQVSSIDDYLQTLNTLKSIKVKMLVPGHNYLPFSKRVLEGNEVEEFIEASIEAMN CCCCCCCHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHH RLLGIAKVLLSERPLTICEFADNLIHEYGVKRSLYPQALITANAIIRFYKRRRLLRIIKE HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GDVELYSIK CCEEEEEEC >Mature Secondary Structure MVEVTIRDLTSRVSLVGTYYGDVELNMVYVKDSGVLLDTSTSSIIEDVVKVIGLPKVAII CEEEEHHHHHHHHHHHEEEECCEEEEEEEEECCCEEEECCHHHHHHHHHHHHCCCCEEEE THPHEDHAGGSGYLASRGVRVIAHEAARGFLYNNVINVDSFFSLKYRSCFTPEFTESFIR ECCCCCCCCCCCCHHHCCCCEEEHHHHHHHHHHCEECCCHHHEEHHHCCCCHHHHHHHHH DFRSKVGSPVVHESFRGMLNLNGVKCIEAFGHTSGTVVCIVDDVMFTSDAVQGLGIRGLS HHHHHHCCCHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEEEECHHHHHHHHHCCCCCCCC TTDSIPQVSSIDDYLQTLNTLKSIKVKMLVPGHNYLPFSKRVLEGNEVEEFIEASIEAMN CCCCCCCHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHH RLLGIAKVLLSERPLTICEFADNLIHEYGVKRSLYPQALITANAIIRFYKRRRLLRIIKE HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GDVELYSIK CCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA