| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is trpE [H]
Identifier: 159041610
GI number: 159041610
Start: 1093572
End: 1094825
Strand: Reverse
Name: trpE [H]
Synonym: Cmaq_1043
Alternate gene names: 159041610
Gene position: 1094825-1093572 (Counterclockwise)
Preceding gene: 159041611
Following gene: 159041609
Centisome position: 52.7
GC content: 46.09
Gene sequence:
>1254_bases GTGAAGGTGCCCCTTGAGGAGTTACCTAAGCCTAGGGAATTAGTTAGGGTTCTTATTGAGAATGGTGAGGATCACGTTAC ACTACTTGAGAGTGGGCCAGGATTCCCTGAGAGGGCTAGGTTCACCATAGTGGCCTGGGGGGTTAAGGACTTAGTGACTA TTAATGATAACTTATATGATGAGCTTAAGTCCCTTTACAGGGGACTGGGTAGGTTTGAGGATGGTAATATCGCTGTGGGT TACTTATCCTATGAGGCCATTGCATCAATAGAGCCTCACTTAGCTGGTTTAATTAAGATGAGTGATTGGCCTCAGGCTGA ATTCATGATACCCAGTAACGTGGTTATCTACGATTACTTCCTGGGGAGGGCCTACGTTAAGGGTGAGTTACCTAGGAGTA AGCCTGGTGATGAGGGTGATTTCAAGGTCACTGGGTTAGTGACCGCCACGGATCCCGTTGAGTACATGAAGTGGGTTTCA GAGGCCATTGAGGATATTAAGAATGGTGAGGTCTTCCAAGTGGTTTTATCAAGGTATGAGGAGTATGGGTTCACGGGGGA TTTAATGACTCTTTACGGGAAGTTAGCTGACCTTAACCCATCACCATACATGTACTTCATGAGGATGAGTGATAAGTACA TAATAGGCACAAGCCCTGAACTACTGGTTAAGGTTGATGGACTCAGGGTTGAGACACACCCAATAGCTGGAACAAGACCT AGGGGGAGGGATTCATGGAGTGATATTAGGCTTGAGGAGGAATTACTCTCAAGCATTAAGGATAGGGCTGAACACGTAAT GCTCGTTGACTTAGCTAGGAACGATATAGGTAAGGTATGCGTATACGGTAGTGTTAAGGTTAAGGAACTATACGCCATTG AGAAGTATCAAAGCGTCCAACACCTTGTTTCCAGGGTTGAGGGAATGCTGAGTAAGGGTAATGATATTGTCGACGCCTTA GTCTCAACATTCCCAGCAGGCACAGTGAGTGGTGCACCTAAGCCAAGGGCAATGGAGCTAATAGCCAAGTACGAGAATTC ACCAAGAGGACCCTACGCAGGTGCATTGGGCATTATGCATAGTGGTGGTGGGGAATTCGCCATAATAATAAGAAGCCTAT TCTCAATGAACGATAAAGTAAGGATTCAGGCAGGCGCCGGCATAGTTTACGATTCAATACCTGAAGCCGAGCTTCAGGAA ACTGAGGATAAGCTTGGAAGCATTAAGAGGGTGTTAGGTGTATGGCGGACATAA
Upstream 100 bases:
>100_bases AAGTATAATCCATTTTTAATAGATGTTAATTCAGGGGTTGAATCAAGCCCCGGTGTTAAGGATTGGAGACTAATCATGGA GGTTGTTAAGGTGATTAAGG
Downstream 100 bases:
>100_bases CAGTGATAATAGATAACTACGATTCATTCGTGTACAATATCGCCCAGTACGTGGGTGAATTAGACAGTAGACCACTGGTC TTTAGGAATGATGAAGTAAG
Product: anthranilate synthase
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MKVPLEELPKPRELVRVLIENGEDHVTLLESGPGFPERARFTIVAWGVKDLVTINDNLYDELKSLYRGLGRFEDGNIAVG YLSYEAIASIEPHLAGLIKMSDWPQAEFMIPSNVVIYDYFLGRAYVKGELPRSKPGDEGDFKVTGLVTATDPVEYMKWVS EAIEDIKNGEVFQVVLSRYEEYGFTGDLMTLYGKLADLNPSPYMYFMRMSDKYIIGTSPELLVKVDGLRVETHPIAGTRP RGRDSWSDIRLEEELLSSIKDRAEHVMLVDLARNDIGKVCVYGSVKVKELYAIEKYQSVQHLVSRVEGMLSKGNDIVDAL VSTFPAGTVSGAPKPRAMELIAKYENSPRGPYAGALGIMHSGGGEFAIIIRSLFSMNDKVRIQAGAGIVYDSIPEAELQE TEDKLGSIKRVLGVWRT
Sequences:
>Translated_417_residues MKVPLEELPKPRELVRVLIENGEDHVTLLESGPGFPERARFTIVAWGVKDLVTINDNLYDELKSLYRGLGRFEDGNIAVG YLSYEAIASIEPHLAGLIKMSDWPQAEFMIPSNVVIYDYFLGRAYVKGELPRSKPGDEGDFKVTGLVTATDPVEYMKWVS EAIEDIKNGEVFQVVLSRYEEYGFTGDLMTLYGKLADLNPSPYMYFMRMSDKYIIGTSPELLVKVDGLRVETHPIAGTRP RGRDSWSDIRLEEELLSSIKDRAEHVMLVDLARNDIGKVCVYGSVKVKELYAIEKYQSVQHLVSRVEGMLSKGNDIVDAL VSTFPAGTVSGAPKPRAMELIAKYENSPRGPYAGALGIMHSGGGEFAIIIRSLFSMNDKVRIQAGAGIVYDSIPEAELQE TEDKLGSIKRVLGVWRT >Mature_417_residues MKVPLEELPKPRELVRVLIENGEDHVTLLESGPGFPERARFTIVAWGVKDLVTINDNLYDELKSLYRGLGRFEDGNIAVG YLSYEAIASIEPHLAGLIKMSDWPQAEFMIPSNVVIYDYFLGRAYVKGELPRSKPGDEGDFKVTGLVTATDPVEYMKWVS EAIEDIKNGEVFQVVLSRYEEYGFTGDLMTLYGKLADLNPSPYMYFMRMSDKYIIGTSPELLVKVDGLRVETHPIAGTRP RGRDSWSDIRLEEELLSSIKDRAEHVMLVDLARNDIGKVCVYGSVKVKELYAIEKYQSVQHLVSRVEGMLSKGNDIVDAL VSTFPAGTVSGAPKPRAMELIAKYENSPRGPYAGALGIMHSGGGEFAIIIRSLFSMNDKVRIQAGAGIVYDSIPEAELQE TEDKLGSIKRVLGVWRT
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=369, Percent_Identity=35.5013550135501, Blast_Score=195, Evalue=4e-51, Organism=Escherichia coli, GI1788114, Length=260, Percent_Identity=38.4615384615385, Blast_Score=184, Evalue=9e-48, Organism=Escherichia coli, GI87082077, Length=269, Percent_Identity=27.5092936802974, Blast_Score=96, Evalue=5e-21, Organism=Escherichia coli, GI1786809, Length=269, Percent_Identity=29.368029739777, Blast_Score=93, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6320935, Length=372, Percent_Identity=37.0967741935484, Blast_Score=204, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6324361, Length=323, Percent_Identity=26.3157894736842, Blast_Score=94, Evalue=3e-20,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR015890 [H]
Pfam domain/function: PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 46455; Mature: 46455
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVPLEELPKPRELVRVLIENGEDHVTLLESGPGFPERARFTIVAWGVKDLVTINDNLYD CCCCHHHCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEEECCEEEEEECCHHHH ELKSLYRGLGRFEDGNIAVGYLSYEAIASIEPHLAGLIKMSDWPQAEFMIPSNVVIYDYF HHHHHHHHHCCCCCCCEEEEEEEHHHHHCCCHHHHHEEEECCCCCCEEECCCCEEEEEEH LGRAYVKGELPRSKPGDEGDFKVTGLVTATDPVEYMKWVSEAIEDIKNGEVFQVVLSRYE HCCEEEECCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH EYGFTGDLMTLYGKLADLNPSPYMYFMRMSDKYIIGTSPELLVKVDGLRVETHPIAGTRP HCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCEEEECCCCEEEEECCEEEEECCCCCCCC RGRDSWSDIRLEEELLSSIKDRAEHVMLVDLARNDIGKVCVYGSVKVKELYAIEKYQSVQ CCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEECCEEHHHHHHHHHHHHHH HLVSRVEGMLSKGNDIVDALVSTFPAGTVSGAPKPRAMELIAKYENSPRGPYAGALGIMH HHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEE SGGGEFAIIIRSLFSMNDKVRIQAGAGIVYDSIPEAELQETEDKLGSIKRVLGVWRT CCCCCHHHHHHHHHCCCCEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKVPLEELPKPRELVRVLIENGEDHVTLLESGPGFPERARFTIVAWGVKDLVTINDNLYD CCCCHHHCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEEECCEEEEEECCHHHH ELKSLYRGLGRFEDGNIAVGYLSYEAIASIEPHLAGLIKMSDWPQAEFMIPSNVVIYDYF HHHHHHHHHCCCCCCCEEEEEEEHHHHHCCCHHHHHEEEECCCCCCEEECCCCEEEEEEH LGRAYVKGELPRSKPGDEGDFKVTGLVTATDPVEYMKWVSEAIEDIKNGEVFQVVLSRYE HCCEEEECCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH EYGFTGDLMTLYGKLADLNPSPYMYFMRMSDKYIIGTSPELLVKVDGLRVETHPIAGTRP HCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCEEEECCCCEEEEECCEEEEECCCCCCCC RGRDSWSDIRLEEELLSSIKDRAEHVMLVDLARNDIGKVCVYGSVKVKELYAIEKYQSVQ CCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEECCEEHHHHHHHHHHHHHH HLVSRVEGMLSKGNDIVDALVSTFPAGTVSGAPKPRAMELIAKYENSPRGPYAGALGIMH HHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEE SGGGEFAIIIRSLFSMNDKVRIQAGAGIVYDSIPEAELQETEDKLGSIKRVLGVWRT CCCCCHHHHHHHHHCCCCEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10382966 [H]