| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041584
Identifier: 159041584
GI number: 159041584
Start: 1065651
End: 1066643
Strand: Reverse
Name: 159041584
Synonym: Cmaq_1015
Alternate gene names: NA
Gene position: 1066643-1065651 (Counterclockwise)
Preceding gene: 159041587
Following gene: 159041578
Centisome position: 51.34
GC content: 46.22
Gene sequence:
>993_bases ATGGGTAATCTAAGGGTTGTGGTATATGGCTTAGGCCCCATAGGTCAATTAATAACTAGGGTTGCGTTGGAGAGGGGAAT GGAGATTGCTGGGGTAATAGACATTGACCCTGGTAAGGTTGGTAGGGATGTTGGTGAAGTGCTTGGTTTAGGTAAGAGCA TTGGTGTTAAGGTTGAGGGTGATGCTGATAAGGTGTTATCAAGCTCAAAACCTGATATTGTACTCCACTCAACTGGCACA TGGTTAGATAAGGTTTACCCACAGTTGGTTAAGGCGATTAAGGTTGGTGCCGACGTGGTATCAACCTGTGAGACTTTATC ATGGCCATGGTACAGGTACCCTGACTTAGCTGAGCTAATAGACAGTTACGCTAAGACCCATGACTCAACTGTACTCGGTG CCGGGGTTAACCCAGGTTTCATCTTTGATGCATTACCGGCAGTGTTATCCGCAACATTGATTAGGCTTGATAAGATAAGT ATCATTAGGTCACTTAACGCCGCTGAGAGGAGGCTATCATTCCAGAGGAAGATTGGGCTAGGTATGACTCCTAGTCAATT TAAGGAGGCGTTAAGTAGAGGTGAGATAACGGCACACGTTGGTTTCGCTGAATCCATACTCTTAACAGCAGGCATCATTG GCATTAACCTAACTGAAGTTAGGGAGAGCCAGGAGGCTGTAATTGCTGATAAGCATTATGAGACCCAGTACTTTAAGATT GAGCCTGGTCAAGTCCGCGGTGTTGATGGTTATGGGGTTGGGTTAATTAATGGGCGTGAAGTCATTAGGGTTGAGTTAAG GGCATGCGTTGCCTGTGAGAATTTCGAGGAGGTTAGGCTTGAGGGTGAACCAACCATAACCTGGAGGAGCAGTGGAACAC CAGGTGACCCAGCCACCGCCGCTGTGGTTGTTAATTTAGCTAGTAGGGTTACTGAGGCTAAGCCTGGTTTAATTACGCTT AAGGACCTAATAAACTACTCATACAGTACGTGA
Upstream 100 bases:
>100_bases AGTCAACTAACATTAAACTTATAAGTAGTACCTATATATGCGCCTACATTACATGTAATTAAGGACCCAATACTTAAACA CCCCTAGTTACCATAGGATT
Downstream 100 bases:
>100_bases AATTCAATAATATTGAGGACAGTAACCCCCACGTGGCCGGCTAGATGAGCTTCAAGTAGGCGTAGTAAATACTGGCGTTA ACTAGGGTTACTGGTATACC
Product: dihydrodipicolinate reductase
Products: NA
Alternate protein names: Dihydrodipicolinate Reductase N-Terminus Domain Protein; Oxidoreductase; Oxidoreductase Domain Protein; (2r 4S)-2 4-Diaminopentanoate Dehydrogenase; Ypothetical Protein SMU.
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MGNLRVVVYGLGPIGQLITRVALERGMEIAGVIDIDPGKVGRDVGEVLGLGKSIGVKVEGDADKVLSSSKPDIVLHSTGT WLDKVYPQLVKAIKVGADVVSTCETLSWPWYRYPDLAELIDSYAKTHDSTVLGAGVNPGFIFDALPAVLSATLIRLDKIS IIRSLNAAERRLSFQRKIGLGMTPSQFKEALSRGEITAHVGFAESILLTAGIIGINLTEVRESQEAVIADKHYETQYFKI EPGQVRGVDGYGVGLINGREVIRVELRACVACENFEEVRLEGEPTITWRSSGTPGDPATAAVVVNLASRVTEAKPGLITL KDLINYSYST
Sequences:
>Translated_330_residues MGNLRVVVYGLGPIGQLITRVALERGMEIAGVIDIDPGKVGRDVGEVLGLGKSIGVKVEGDADKVLSSSKPDIVLHSTGT WLDKVYPQLVKAIKVGADVVSTCETLSWPWYRYPDLAELIDSYAKTHDSTVLGAGVNPGFIFDALPAVLSATLIRLDKIS IIRSLNAAERRLSFQRKIGLGMTPSQFKEALSRGEITAHVGFAESILLTAGIIGINLTEVRESQEAVIADKHYETQYFKI EPGQVRGVDGYGVGLINGREVIRVELRACVACENFEEVRLEGEPTITWRSSGTPGDPATAAVVVNLASRVTEAKPGLITL KDLINYSYST >Mature_329_residues GNLRVVVYGLGPIGQLITRVALERGMEIAGVIDIDPGKVGRDVGEVLGLGKSIGVKVEGDADKVLSSSKPDIVLHSTGTW LDKVYPQLVKAIKVGADVVSTCETLSWPWYRYPDLAELIDSYAKTHDSTVLGAGVNPGFIFDALPAVLSATLIRLDKISI IRSLNAAERRLSFQRKIGLGMTPSQFKEALSRGEITAHVGFAESILLTAGIIGINLTEVRESQEAVIADKHYETQYFKIE PGQVRGVDGYGVGLINGREVIRVELRACVACENFEEVRLEGEPTITWRSSGTPGDPATAAVVVNLASRVTEAKPGLITLK DLINYSYST
Specific function: Unknown
COG id: COG3804
COG function: function code S; Uncharacterized conserved protein related to dihydrodipicolinate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35563; Mature: 35432
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNLRVVVYGLGPIGQLITRVALERGMEIAGVIDIDPGKVGRDVGEVLGLGKSIGVKVEG CCCEEEEEEECCCHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCEEECC DADKVLSSSKPDIVLHSTGTWLDKVYPQLVKAIKVGADVVSTCETLSWPWYRYPDLAELI CHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCHHHHH DSYAKTHDSTVLGAGVNPGFIFDALPAVLSATLIRLDKISIIRSLNAAERRLSFQRKIGL HHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC GMTPSQFKEALSRGEITAHVGFAESILLTAGIIGINLTEVRESQEAVIADKHYETQYFKI CCCHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCCHHHHHCCHHHEEECCCCCCEEEEE EPGQVRGVDGYGVGLINGREVIRVELRACVACENFEEVRLEGEPTITWRSSGTPGDPATA CCCCEECCCCCCEEEECCCCEEHHHHHHHHHHCCHHHEEECCCCEEEECCCCCCCCCHHH AVVVNLASRVTEAKPGLITLKDLINYSYST HHHHHHHHHHHHCCCCEEEHHHHHCCCCCC >Mature Secondary Structure GNLRVVVYGLGPIGQLITRVALERGMEIAGVIDIDPGKVGRDVGEVLGLGKSIGVKVEG CCEEEEEEECCCHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCEEECC DADKVLSSSKPDIVLHSTGTWLDKVYPQLVKAIKVGADVVSTCETLSWPWYRYPDLAELI CHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCHHHHH DSYAKTHDSTVLGAGVNPGFIFDALPAVLSATLIRLDKISIIRSLNAAERRLSFQRKIGL HHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC GMTPSQFKEALSRGEITAHVGFAESILLTAGIIGINLTEVRESQEAVIADKHYETQYFKI CCCHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCCHHHHHCCHHHEEECCCCCCEEEEE EPGQVRGVDGYGVGLINGREVIRVELRACVACENFEEVRLEGEPTITWRSSGTPGDPATA CCCCEECCCCCCEEEECCCCEEHHHHHHHHHHCCHHHEEECCCCEEEECCCCCCCCCHHH AVVVNLASRVTEAKPGLITLKDLINYSYST HHHHHHHHHHHHCCCCEEEHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA