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The map label for this gene is 159041556

Identifier: 159041556

GI number: 159041556

Start: 1039578

End: 1040693

Strand: Reverse

Name: 159041556

Synonym: Cmaq_0987

Alternate gene names: NA

Gene position: 1040693-1039578 (Counterclockwise)

Preceding gene: 159041557

Following gene: 159041554

Centisome position: 50.09

GC content: 50.18

Gene sequence:

>1116_bases
GTGGCTTGGGCCTCCTACAGGCCCGATGCAGTAACAATATGGAGAGAACAGGCAGTGCGGGAGAGGCTAAACTGGTATTA
CGCAGTTATGCGTGACTTAGCACCGGCGAAGTTTCACATAGCGGCTAGGATAGAGGCCCCTAATGATTACGTATCCATGG
ATGACGCGGAGCTGTGGAGGATTCATGATGAGCTTGGGCATACCTTCGATGAGGAGTGGATGCAGCAGAGGGAGCGACCG
GATACCTCACTGGTGTGGAAGGACCTGCCTCAAGCCTCCTTCCTCGACGTCAAGATAGAGCTGGCTAGAAGACAGTTGAG
GCATTGTATGCTATGTGAGAGGAGGTGTGGTGTGGATAGAACCATCAAGCGTGGAGCCTGCCTCCTAAACGCCAAGGCCC
GTGTGGCAAGCTTCTTCCACCACATGGGGGAGGAGGCACCACTAGTGCCCTCTGGCACAGTGTTTTTCACTGGCTGCAAC
TTCCGCTGCGTTTACTGTCAGAACTGGGATATATCGCAGAGACCTGAGAATGGTGTTGAGGTCACGCCAGGGGAATTAGC
CGCTATCCAAGCTAAGTTGAGGGAAGATGGGGCACGTAACATTAACTGGGTTGGTGGTGAACCAACCCCCAGCATCCCAT
TCATCTTAGAGTCGTTGAAGATTCTCGCTAAGCGAAGAATTAATGTACCCCAGCTTTGGAACTCCAACATGTATCTAACA
CCAGAGAGCTTAAGCTTGATACTACACGTCATGGATATATGGCTCCCAGACTTCAAATATGGAAACAATGCCTGTGCCCT
GAGGTATTCTGTGGCTCCCCGTTACTGGGATGTGACCACGAGGAATCTCTCAGTAATATGTAAAAGAGGGGAGGATATCA
TTATACGTCACCTAGTGCTCCCAAGCCACGTCAACTGTTGCACGAAGCCCGTGCTCCGATGGATAGCGGAGAATTGCAAG
AGGGCTCTCGTTAATATAATGGATCAGTATCATCCCGATTACTTAGTCTCATCATCTAAATACATGGAGATGAACAGATT
AGTCTCAAAGAGGGAAATGGGGGAGGCCTATCAATATGCTGATGAACTCGGACTAGTCTGGAGACCGATTAGTTGA

Upstream 100 bases:

>100_bases
CCCCCTCATTATATCAACCTAATGCAGCCTCACCCTATATATGTTCTCCAGGTAAGTTGCTTAAATTAATATTTAAATTA
ATAAGTTACTAAAATTACCT

Downstream 100 bases:

>100_bases
GCAAACGGTATTGATAATGATTATCCTTTATTTATATTCACCTATACTTCCCAATTATCTGAAAGCATGTTTCTTATGGT
GTCTAGGAGAATGTATGTCG

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MAWASYRPDAVTIWREQAVRERLNWYYAVMRDLAPAKFHIAARIEAPNDYVSMDDAELWRIHDELGHTFDEEWMQQRERP
DTSLVWKDLPQASFLDVKIELARRQLRHCMLCERRCGVDRTIKRGACLLNAKARVASFFHHMGEEAPLVPSGTVFFTGCN
FRCVYCQNWDISQRPENGVEVTPGELAAIQAKLREDGARNINWVGGEPTPSIPFILESLKILAKRRINVPQLWNSNMYLT
PESLSLILHVMDIWLPDFKYGNNACALRYSVAPRYWDVTTRNLSVICKRGEDIIIRHLVLPSHVNCCTKPVLRWIAENCK
RALVNIMDQYHPDYLVSSSKYMEMNRLVSKREMGEAYQYADELGLVWRPIS

Sequences:

>Translated_371_residues
MAWASYRPDAVTIWREQAVRERLNWYYAVMRDLAPAKFHIAARIEAPNDYVSMDDAELWRIHDELGHTFDEEWMQQRERP
DTSLVWKDLPQASFLDVKIELARRQLRHCMLCERRCGVDRTIKRGACLLNAKARVASFFHHMGEEAPLVPSGTVFFTGCN
FRCVYCQNWDISQRPENGVEVTPGELAAIQAKLREDGARNINWVGGEPTPSIPFILESLKILAKRRINVPQLWNSNMYLT
PESLSLILHVMDIWLPDFKYGNNACALRYSVAPRYWDVTTRNLSVICKRGEDIIIRHLVLPSHVNCCTKPVLRWIAENCK
RALVNIMDQYHPDYLVSSSKYMEMNRLVSKREMGEAYQYADELGLVWRPIS
>Mature_370_residues
AWASYRPDAVTIWREQAVRERLNWYYAVMRDLAPAKFHIAARIEAPNDYVSMDDAELWRIHDELGHTFDEEWMQQRERPD
TSLVWKDLPQASFLDVKIELARRQLRHCMLCERRCGVDRTIKRGACLLNAKARVASFFHHMGEEAPLVPSGTVFFTGCNF
RCVYCQNWDISQRPENGVEVTPGELAAIQAKLREDGARNINWVGGEPTPSIPFILESLKILAKRRINVPQLWNSNMYLTP
ESLSLILHVMDIWLPDFKYGNNACALRYSVAPRYWDVTTRNLSVICKRGEDIIIRHLVLPSHVNCCTKPVLRWIAENCKR
ALVNIMDQYHPDYLVSSSKYMEMNRLVSKREMGEAYQYADELGLVWRPIS

Specific function: Unknown

COG id: COG1313

COG function: function code R; Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016431
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 43120; Mature: 42989

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWASYRPDAVTIWREQAVRERLNWYYAVMRDLAPAKFHIAARIEAPNDYVSMDDAELWR
CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHH
IHDELGHTFDEEWMQQRERPDTSLVWKDLPQASFLDVKIELARRQLRHCMLCERRCGVDR
HHHHHCCCHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH
TIKRGACLLNAKARVASFFHHMGEEAPLVPSGTVFFTGCNFRCVYCQNWDISQRPENGVE
HHHCCEEEECCHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCCCCCCCE
VTPGELAAIQAKLREDGARNINWVGGEPTPSIPFILESLKILAKRRINVPQLWNSNMYLT
ECCCHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEC
PESLSLILHVMDIWLPDFKYGNNACALRYSVAPRYWDVTTRNLSVICKRGEDIIIRHLVL
HHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEECCCCEEEEECCCCEEEEEECC
PSHVNCCTKPVLRWIAENCKRALVNIMDQYHPDYLVSSSKYMEMNRLVSKREMGEAYQYA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHH
DELGLVWRPIS
HHCCCEEECCC
>Mature Secondary Structure 
AWASYRPDAVTIWREQAVRERLNWYYAVMRDLAPAKFHIAARIEAPNDYVSMDDAELWR
CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHH
IHDELGHTFDEEWMQQRERPDTSLVWKDLPQASFLDVKIELARRQLRHCMLCERRCGVDR
HHHHHCCCHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH
TIKRGACLLNAKARVASFFHHMGEEAPLVPSGTVFFTGCNFRCVYCQNWDISQRPENGVE
HHHCCEEEECCHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCCCCCCCE
VTPGELAAIQAKLREDGARNINWVGGEPTPSIPFILESLKILAKRRINVPQLWNSNMYLT
ECCCHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEC
PESLSLILHVMDIWLPDFKYGNNACALRYSVAPRYWDVTTRNLSVICKRGEDIIIRHLVL
HHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEECCCCEEEEECCCCEEEEEECC
PSHVNCCTKPVLRWIAENCKRALVNIMDQYHPDYLVSSSKYMEMNRLVSKREMGEAYQYA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHH
DELGLVWRPIS
HHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]