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The map label for this gene is yafE [C]

Identifier: 159041437

GI number: 159041437

Start: 908906

End: 909613

Strand: Reverse

Name: yafE [C]

Synonym: Cmaq_0864

Alternate gene names: 159041437

Gene position: 909613-908906 (Counterclockwise)

Preceding gene: 159041438

Following gene: 159041435

Centisome position: 43.78

GC content: 40.96

Gene sequence:

>708_bases
ATGAATAACATGAATCCCACATTTCAAGCAAGTAAGTATGATTCATGGTTCCTAAGTAACGTGAACATCCTTGAATCTGA
AGTCTTATTAATTAAGCATATGCTTGAACCTAATCCAGGTAAGGTGCTCAGCATCGGCTGTGGTTCAGGTTTATTTGAGT
ATATTTTAAGAACTAGGTACGGGTTGATTATTCAGGATTGCGTTGAGCCATCTGAGGATATGGCTAAGGTGGCTGAGTAT
AGGGGGTTGAATGTTAGGATTGGGAGTGCTGAGGAATTACCGTTTAATGATGGGGTGTTTGATACTGTTCTTCTTAATGG
AGTACTTGACTACGTTAATGATGATGCCAAGGCAATTAAGGAGGCGTATAGGGTACTTAAGCCAGGTGGTCATGTAGTAG
TGGCTGATGTTATAGCTGAGGGTGCTTACGGCATTCTCTATAAGTTAGCTGAGGTATTAGGTGACTGGAGTAACCCGTAT
ATTTCACGAATCAAACCCCCGAACCCCTATCCAATAGAGTATGTTAAGCAGGCTAAGTGGCATACCGTTGATGAATTAAT
GAACCTAGTTAAGGGTGCAGGTTTCATTATAGTTAAGACTATGCAAACCTTAACTAGGCACCCGAAGTACTCTAATAATG
AGGTTGAATACCCGATTGATGGTTATGATAAGGGGGATTACGTTGCAATAAAGGGTTGGAAACCCTAA

Upstream 100 bases:

>100_bases
TTTAAATTAATACCGTAATTTTCTAAATCAACATAATGCCAATGATCTTAAGCCACTGGGGAGTAATCCTTATAAATAAG
TTATCTTATATCAATAACCA

Downstream 100 bases:

>100_bases
CTTGATTAGCTAAACTTAACGCATGCTTCTTCCTTTTCGCGTAAATCCTTTGGCATTAACTTAATCGCCCACTGGCTTCA
CTTAAGTAAGCCCTCACTGA

Product: type 11 methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MNNMNPTFQASKYDSWFLSNVNILESEVLLIKHMLEPNPGKVLSIGCGSGLFEYILRTRYGLIIQDCVEPSEDMAKVAEY
RGLNVRIGSAEELPFNDGVFDTVLLNGVLDYVNDDAKAIKEAYRVLKPGGHVVVADVIAEGAYGILYKLAEVLGDWSNPY
ISRIKPPNPYPIEYVKQAKWHTVDELMNLVKGAGFIIVKTMQTLTRHPKYSNNEVEYPIDGYDKGDYVAIKGWKP

Sequences:

>Translated_235_residues
MNNMNPTFQASKYDSWFLSNVNILESEVLLIKHMLEPNPGKVLSIGCGSGLFEYILRTRYGLIIQDCVEPSEDMAKVAEY
RGLNVRIGSAEELPFNDGVFDTVLLNGVLDYVNDDAKAIKEAYRVLKPGGHVVVADVIAEGAYGILYKLAEVLGDWSNPY
ISRIKPPNPYPIEYVKQAKWHTVDELMNLVKGAGFIIVKTMQTLTRHPKYSNNEVEYPIDGYDKGDYVAIKGWKP
>Mature_235_residues
MNNMNPTFQASKYDSWFLSNVNILESEVLLIKHMLEPNPGKVLSIGCGSGLFEYILRTRYGLIIQDCVEPSEDMAKVAEY
RGLNVRIGSAEELPFNDGVFDTVLLNGVLDYVNDDAKAIKEAYRVLKPGGHVVVADVIAEGAYGILYKLAEVLGDWSNPY
ISRIKPPNPYPIEYVKQAKWHTVDELMNLVKGAGFIIVKTMQTLTRHPKYSNNEVEYPIDGYDKGDYVAIKGWKP

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0638 and MJ1252 and M.tuberculosis Rv2003c [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 26395; Mature: 26395

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNMNPTFQASKYDSWFLSNVNILESEVLLIKHMLEPNPGKVLSIGCGSGLFEYILRTRY
CCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHH
GLIIQDCVEPSEDMAKVAEYRGLNVRIGSAEELPFNDGVFDTVLLNGVLDYVNDDAKAIK
HHHHHHHCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHH
EAYRVLKPGGHVVVADVIAEGAYGILYKLAEVLGDWSNPYISRIKPPNPYPIEYVKQAKW
HHHHHHCCCCCEEEHHHHHCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHCCC
HTVDELMNLVKGAGFIIVKTMQTLTRHPKYSNNEVEYPIDGYDKGDYVAIKGWKP
CCHHHHHHHHHCCCEEEEHHHHHHHCCCCCCCCCEECCCCCCCCCCEEEEECCCC
>Mature Secondary Structure
MNNMNPTFQASKYDSWFLSNVNILESEVLLIKHMLEPNPGKVLSIGCGSGLFEYILRTRY
CCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHH
GLIIQDCVEPSEDMAKVAEYRGLNVRIGSAEELPFNDGVFDTVLLNGVLDYVNDDAKAIK
HHHHHHHCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHH
EAYRVLKPGGHVVVADVIAEGAYGILYKLAEVLGDWSNPYISRIKPPNPYPIEYVKQAKW
HHHHHHCCCCCEEEHHHHHCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHCCC
HTVDELMNLVKGAGFIIVKTMQTLTRHPKYSNNEVEYPIDGYDKGDYVAIKGWKP
CCHHHHHHHHHCCCEEEEHHHHHHHCCCCCCCCCEECCCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]