| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041425
Identifier: 159041425
GI number: 159041425
Start: 897204
End: 897989
Strand: Reverse
Name: 159041425
Synonym: Cmaq_0852
Alternate gene names: NA
Gene position: 897989-897204 (Counterclockwise)
Preceding gene: 159041426
Following gene: 159041424
Centisome position: 43.22
GC content: 44.02
Gene sequence:
>786_bases ATGTACAATGCGGTAACGTACTCCTTATACTTCATACTACCATACGTATCATTAATAGTACTAGTATGCGGTGTATCGTA TAGGATTGCCCTATGGATTAATGCCGGTAAGGGTCCACTTGGGCTTTACCTAGGTTTATACAGGCTTGTGATTAGGCCAA GGCAGGAAAGCTTCCTTGGTTCGGTTAAACATATTTTAGCCAGAATGTTCACATACTACACGATACTAGGCACTAGCTAC CGTAGGGATTACTCAACCTGGCTTGGCGTACTTCTATTTCACTGGGGAATATTCCTACTAATCGCCTTCCACCTACACCT ATGGTTACCTGAATTAATGGTCCCTGAAGAATTAATGTTCATCCTAGGAACCACCGTGGGTGCATTAACGCTTGCAGCAG GCGTATTCCTACTTGTGAGGAGGATTAGGGTTCAGAGGATTTATAGGGTCTTCATTAATTACCTTGATGATTACGTGGCG ATCTCATGGGTCATAGCAATAGTGGTGCTTGGGTTAGCTCTTAGATTAACCGCACCCTCCTCATTATTTAATGAAGCCAC TAAGTGGGCTCTTGGCTTAGTATCATTCAAATACATCCCCCCACCCAGTAACCTACTCTTCTACGCGCATGTGCTTGCAG TGGAACTATTCATGATGTATATCCCCTTCGCTAAGATGATTCACCCATTCTCAATGCCCGTTAACCCAGCCCTTTATGGT AAGTTTGAAGACGTTAATGAAGTTGAGGAGAGGGTTACGGGAATCTGGGGTGGTAGTCATGGTTAA
Upstream 100 bases:
>100_bases ACTACACCTACGGCATAACGTTCTTCAACATGAGTGAGGAACAGAAGAAAAAGTACCTTGAGGATTTGGAGAAGGCAATG GAGTCATGGCAGTGACTTAA
Downstream 100 bases:
>100_bases TGTTAAAGTTAAGTATAAGGGTGAGGACAAGGATATACTGGAGACTAGCCCACGCTACAGTGAGTGGGTTAAGGAGTTCA GTAAAGGTAGTGGTCACTTG
Product: nitrate reductase subunit gamma-like protein
Products: nitrate; reduced acceptor
Alternate protein names: Nitrate Reductase Gamma Subunit-Like Protein
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MYNAVTYSLYFILPYVSLIVLVCGVSYRIALWINAGKGPLGLYLGLYRLVIRPRQESFLGSVKHILARMFTYYTILGTSY RRDYSTWLGVLLFHWGIFLLIAFHLHLWLPELMVPEELMFILGTTVGALTLAAGVFLLVRRIRVQRIYRVFINYLDDYVA ISWVIAIVVLGLALRLTAPSSLFNEATKWALGLVSFKYIPPPSNLLFYAHVLAVELFMMYIPFAKMIHPFSMPVNPALYG KFEDVNEVEERVTGIWGGSHG
Sequences:
>Translated_261_residues MYNAVTYSLYFILPYVSLIVLVCGVSYRIALWINAGKGPLGLYLGLYRLVIRPRQESFLGSVKHILARMFTYYTILGTSY RRDYSTWLGVLLFHWGIFLLIAFHLHLWLPELMVPEELMFILGTTVGALTLAAGVFLLVRRIRVQRIYRVFINYLDDYVA ISWVIAIVVLGLALRLTAPSSLFNEATKWALGLVSFKYIPPPSNLLFYAHVLAVELFMMYIPFAKMIHPFSMPVNPALYG KFEDVNEVEERVTGIWGGSHG >Mature_261_residues MYNAVTYSLYFILPYVSLIVLVCGVSYRIALWINAGKGPLGLYLGLYRLVIRPRQESFLGSVKHILARMFTYYTILGTSY RRDYSTWLGVLLFHWGIFLLIAFHLHLWLPELMVPEELMFILGTTVGALTLAAGVFLLVRRIRVQRIYRVFINYLDDYVA ISWVIAIVVLGLALRLTAPSSLFNEATKWALGLVSFKYIPPPSNLLFYAHVLAVELFMMYIPFAKMIHPFSMPVNPALYG KFEDVNEVEERVTGIWGGSHG
Specific function: Unknown
COG id: COG2181
COG function: function code C; Nitrate reductase gamma subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.7.99.4
Molecular weight: Translated: 29827; Mature: 29827
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNAVTYSLYFILPYVSLIVLVCGVSYRIALWINAGKGPLGLYLGLYRLVIRPRQESFLG CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHH SVKHILARMFTYYTILGTSYRRDYSTWLGVLLFHWGIFLLIAFHLHLWLPELMVPEELMF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH ILGTTVGALTLAAGVFLLVRRIRVQRIYRVFINYLDDYVAISWVIAIVVLGLALRLTAPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH SLFNEATKWALGLVSFKYIPPPSNLLFYAHVLAVELFMMYIPFAKMIHPFSMPVNPALYG HHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCC KFEDVNEVEERVTGIWGGSHG CCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MYNAVTYSLYFILPYVSLIVLVCGVSYRIALWINAGKGPLGLYLGLYRLVIRPRQESFLG CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHH SVKHILARMFTYYTILGTSYRRDYSTWLGVLLFHWGIFLLIAFHLHLWLPELMVPEELMF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH ILGTTVGALTLAAGVFLLVRRIRVQRIYRVFINYLDDYVAISWVIAIVVLGLALRLTAPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH SLFNEATKWALGLVSFKYIPPPSNLLFYAHVLAVELFMMYIPFAKMIHPFSMPVNPALYG HHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCC KFEDVNEVEERVTGIWGGSHG CCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: nitrite; acceptor
Specific reaction: nitrite + acceptor = nitrate + reduced acceptor
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA