| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041397
Identifier: 159041397
GI number: 159041397
Start: 866632
End: 867060
Strand: Reverse
Name: 159041397
Synonym: Cmaq_0824
Alternate gene names: NA
Gene position: 867060-866632 (Counterclockwise)
Preceding gene: 159041399
Following gene: 159041396
Centisome position: 41.73
GC content: 44.06
Gene sequence:
>429_bases GTGGGTAAGTTCACGTGCCTTCACTGCGACAACTGCTGCTTCTTTGAACGTGAGGAGCAGGGACCCTTAGTGTTCAGTGA TGAGGTTAAGAGACTTAGGAGATTAGCTAAAGAAAGGGGGGTTGAGTTAACCTTCAGGGAGATTAAGGTTAATGGGGTTA CAATGTATAGGTGGATCATATTGGGTTACTGCCCATTCTATGATAAGGATAATAAACTATGCACAATACATTCGGTTAAG CCACTTGCCTGCAAAATGTATCCACTATTGTTTAACCCAAGGACTGGTGAAGTGTTGGTGTCTAAGGATTGCCCATGGGT TGAGGAGACTGTTAAGAACGGTGGCATTAACCTAAGTGACTTCCCTGAGGAGGCTAAGGCGCTTCATAGGGTTGTGATTA GGCTTAGTAAGGGTAGTTCAAATGGTTAA
Upstream 100 bases:
>100_bases AGTTAAATTAAAGCCTATTTTAAACTCTTCCCGTTATTTTCAGGGTAGTACCGGTTCCCTAGTGTGAATTACTTATTAAG GGAAGCTGCATGAGCGTAAT
Downstream 100 bases:
>100_bases TTTAATCTTGTGGAAAAGTTTAAAACGAGATACGCAAATGGTAGTTAGCTATGTCTTACACAATGACATCTAAGCCTATG ACGTATGTGCTTTGGGTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MGKFTCLHCDNCCFFEREEQGPLVFSDEVKRLRRLAKERGVELTFREIKVNGVTMYRWIILGYCPFYDKDNKLCTIHSVK PLACKMYPLLFNPRTGEVLVSKDCPWVEETVKNGGINLSDFPEEAKALHRVVIRLSKGSSNG
Sequences:
>Translated_142_residues MGKFTCLHCDNCCFFEREEQGPLVFSDEVKRLRRLAKERGVELTFREIKVNGVTMYRWIILGYCPFYDKDNKLCTIHSVK PLACKMYPLLFNPRTGEVLVSKDCPWVEETVKNGGINLSDFPEEAKALHRVVIRLSKGSSNG >Mature_141_residues GKFTCLHCDNCCFFEREEQGPLVFSDEVKRLRRLAKERGVELTFREIKVNGVTMYRWIILGYCPFYDKDNKLCTIHSVKP LACKMYPLLFNPRTGEVLVSKDCPWVEETVKNGGINLSDFPEEAKALHRVVIRLSKGSSNG
Specific function: Unknown
COG id: COG0727
COG function: function code R; Predicted Fe-S-cluster oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16321; Mature: 16190
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 5.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKFTCLHCDNCCFFEREEQGPLVFSDEVKRLRRLAKERGVELTFREIKVNGVTMYRWII CCCEEEEEECCCEEEEECCCCCEEEHHHHHHHHHHHHHCCCEEEEEEEEECCEEEEEEEH LGYCPFYDKDNKLCTIHSVKPLACKMYPLLFNPRTGEVLVSKDCPWVEETVKNGGINLSD HHCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCEEEECCCCHHHHHHHCCCCCCCC FPEEAKALHRVVIRLSKGSSNG CCHHHHHHHHHHEEEECCCCCC >Mature Secondary Structure GKFTCLHCDNCCFFEREEQGPLVFSDEVKRLRRLAKERGVELTFREIKVNGVTMYRWII CCEEEEEECCCEEEEECCCCCEEEHHHHHHHHHHHHHCCCEEEEEEEEECCEEEEEEEH LGYCPFYDKDNKLCTIHSVKPLACKMYPLLFNPRTGEVLVSKDCPWVEETVKNGGINLSD HHCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCEEEECCCCHHHHHHHCCCCCCCC FPEEAKALHRVVIRLSKGSSNG CCHHHHHHHHHHEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA