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The map label for this gene is yejH [C]

Identifier: 159041395

GI number: 159041395

Start: 862906

End: 865566

Strand: Reverse

Name: yejH [C]

Synonym: Cmaq_0822

Alternate gene names: 159041395

Gene position: 865566-862906 (Counterclockwise)

Preceding gene: 159041396

Following gene: 159041390

Centisome position: 41.66

GC content: 41.41

Gene sequence:

>2661_bases
GTGGTGGAGTTTAAGGTTAATGTTAATGGTGTATTAATTAAGAGGCAATGGAACTGGGGGACTGTAGTCAAGGTTAAGGA
TGAGTTGAAGAGAATGGGGTTTAAGTGGAATCCCAGTGATACAACCTGGGTGGGTAAATTAAGTAGGATTAATGACGTTG
AGAAGCTTAGGGAGCTACTTAGGTTAAGCGCCAGTGAGTATGAGTTAATTGTTAAGCCATTACTTAAGGCATCAATTAAG
GTTCCTAAGGTTCCGGAGGAGTTTAAGCAGTGTGCAATGGGTAATAGGGTTAATGTACCATGTGTTGCTAAACTCATAAT
GGAGGATGAATACGTTGAGGCTGAGTCATTCGAGGATTACGTTACTAAGCTTGTGGGTAAGGCGATGGAGAAACTAGGGG
TTAAGAGTGATGATGCCGTTGAGGAGGCCGTGAAAATACTCCTGAATGATCATTCCCTAAGGGAGACTTACGGTAGGAGA
ATTGAATGGAGACTTGCCATTGTTGATAACGGTAAGGTGACGTTAAACTTCCTAGCCAAGGGACTACTTAAGAGCCTTAG
GGAGATTAGAATACCTTACAATACTGTTGATAAGCAAGGTAACTTGAATAGGTATGAAATACCAGTTATAGGTAGGGATG
ATGTGTATAGGGATGGTGATAAATGGATTATTAGGTTCCCTGTATTTGAAAAGCAAACCATAGAGTCATTACTGAGGAAA
CTGGGCTACGTTATTAAGGAAGTTGAGTGGAAACCTAGATCAATCCCAGTGCCTAAGGATAATGTTAATCTACTGGATTT
CCAAAGGAATGCATTAGAGGCGTGGGTTAAGAATGGTTATAAGGGAACAGTGGTCATCCCAACAGGTGGTGGTAAAACAT
TCATCGCATTAAAGGCCATTGCAACAGTTAAAGTACCTACAATAATACTAGTGGTTACGGAGGAATTAATGAATCAGTGG
CATGATAGAATCAGAAGGATGCTGGGTATTGAGGCAGGTAGGCTTGGTGGTGGGTTTAATGAAATCAAGGATGTGACCGT
AGCCATATATAATTCAGCGGTTAAGTACATAGGTGACATTAGGGATAGATTCGACTTAGCAATCTTCGATGAGTGTTTAC
CATATGATGCATTAGTTATTACGGATAAGGGATTAATACCCATAGGGGAGATTGTGGAGAAGAGATTACCCGTTAAGGTT
CTTACGCATAAAGGACGCTTCATGCGTATTACTAATTACTTCAAAATACCCTTAGTTAAGAGACTAGTAAGGATTACGCA
TGAGAAAGGCGAATTAACGGTAACGGAAGACCATCTAATCCTTACACAGAATGGGTGGAAACCAGCAATAGAATTAAGGA
ACGGAGACTTACTATACTTCTACAATACGCAGGCGCCACAGGGTAGAATTCAAAGCGGCTTAAATCTCAGGGAACCATTA
TACGGTAAGCAACCTAAACCTATGAATAATGAACCCACTAAAGTAGCAACTACCCTTGGAGATGATGACATTATTAAAGA
TAGTGGACAAGGATTACTGCTTATTAATTCCATGGGAAATAAGAGGTATGAAGCTAAGCATGATTCATACTTTACCCCAG
TGAGAGTACTTAGTGTGAACGTTCTTGTAGATAAAGATCATGATAATGCGATACGGCAATCACTACCTTCTCCGTATGCT
GAACATGAAGTTGATGAGGGGATTCCTAAGATTAATCCAGTCACCGGCATTAGAGGTATTTTAGGAGGGGTAGGGGTTGT
TTATGATATTGAGGTGGAGGAGGATCATAGTTTCATAGCTGATGGTGTGGTTGTTCATAATTGCCATCATGTGCCTGCTG
AGACTTTTAAGAACGTTGCATTCAAGTTGACTGCACCCTATAGGTTAGCCTTATCAGCAACACCAACTAGGAAGGATGGT
AACGAGGAATTAATATACCTAACCAGTGGTGGTGTGGTGCATAAGGCGACTTACCTAGACATGGTTCATGCTGGTCTCGT
TGTCCCAATAAGGCACTTCAGGATTTACGTTAAGTTAAGTGAGGATGAGGTTAAGGAGTATAGGTCAATTGGGGAGGATA
ACGCCATAATGCTTAGGAACACTGCGGCTCAGGCTAAGGCTAAGATTCCAGTGACTGTTCAATTAACTAAACTGGAGTAT
TCACTGGGAAGTAAGGTAATAGTGTTTACACAGTATATTGAGCAGGCTGAGGAGATTTACGAGGAATTGAAGAAGGAGCT
TGGGGTTAAGGTAGCGTTAATAACATCTAAGACCAGTAATAGGGATGATATATTTGAGAGATTCAGGTTAGGTAATGTTA
AGGTCCTGGTTACTACAACAGTGTTGGATGAGGGTATTGATGTGCCTGATGCTGATGTAGCCGTAGTGGTTTCAGGAACA
GGTTCACCTAGGCAAATGATTCAGAGGGTTGGGCGTGTGGTTAGGCAGACTGAGGGTAAAGTTGAGGCTAGGGTCTATGA
AATAATTGCTAGAAACACCATTGAGGAGGCCTTAAGTAATGAGAGGCACCCGGATGATGAAGTCTACGAGAAGGAGTGTA
GGAAGTATGATGAGAAGGACCTAAGTCTACTCCTAAATAGGGTTAAGGCAATAGTTAGTAAACTTAAGGAGCAGGGTAGC
ATGCTTAAGTATGTTAAATGA

Upstream 100 bases:

>100_bases
CCTAAATGCGGTAGAAAGATTCCATGGGATGAGTTAAGGAAGGCGTATGAATAATCAGTGACCATAGGTTTATAACTTAC
ACACTGGGAATGGCTACTCA

Downstream 100 bases:

>100_bases
AACCAGTGGTGAAAAATACTTACTGTTCAACATTTAGGATGAAGCCAAGTTCCTAATCTTAAACCTTTAACCCATCAATA
CTCGCGTTAAACTCATCCTT

Product: helicase domain-containing protein

Products: NA

Alternate protein names: Type III Restriction Res Subunit; DNA Repair Helicase; DNA Repair Helicase RAD; DNA Repair Helicase Rad; Helicase Domain-Containing Protein; DNA Repair Protein; DNA Repair Protein Rad; Superfamily II DNA/RNA Helicase; Helicase-Like Protein; Helicase Protein; Type III Restriction Res Subunit Family; DNA Repair Protein RAD; DNA Helicase; Helicase DNA Repair; Helicase DNA Repair Rad; XPB/RAD25-Related Helicase; ATP-Dependent DNA Helicase; ATP-Dependet DEAD/DEAH Box Helicase; ATP-Dependent Helicase; DNA/RNA Repair Helicase; Helicase ATP-Dependent; RAD25-Type DNA Repair Helicase; DNA Repair Related Protein; Restriction Endonuclease Family Protein

Number of amino acids: Translated: 886; Mature: 886

Protein sequence:

>886_residues
MVEFKVNVNGVLIKRQWNWGTVVKVKDELKRMGFKWNPSDTTWVGKLSRINDVEKLRELLRLSASEYELIVKPLLKASIK
VPKVPEEFKQCAMGNRVNVPCVAKLIMEDEYVEAESFEDYVTKLVGKAMEKLGVKSDDAVEEAVKILLNDHSLRETYGRR
IEWRLAIVDNGKVTLNFLAKGLLKSLREIRIPYNTVDKQGNLNRYEIPVIGRDDVYRDGDKWIIRFPVFEKQTIESLLRK
LGYVIKEVEWKPRSIPVPKDNVNLLDFQRNALEAWVKNGYKGTVVIPTGGGKTFIALKAIATVKVPTIILVVTEELMNQW
HDRIRRMLGIEAGRLGGGFNEIKDVTVAIYNSAVKYIGDIRDRFDLAIFDECLPYDALVITDKGLIPIGEIVEKRLPVKV
LTHKGRFMRITNYFKIPLVKRLVRITHEKGELTVTEDHLILTQNGWKPAIELRNGDLLYFYNTQAPQGRIQSGLNLREPL
YGKQPKPMNNEPTKVATTLGDDDIIKDSGQGLLLINSMGNKRYEAKHDSYFTPVRVLSVNVLVDKDHDNAIRQSLPSPYA
EHEVDEGIPKINPVTGIRGILGGVGVVYDIEVEEDHSFIADGVVVHNCHHVPAETFKNVAFKLTAPYRLALSATPTRKDG
NEELIYLTSGGVVHKATYLDMVHAGLVVPIRHFRIYVKLSEDEVKEYRSIGEDNAIMLRNTAAQAKAKIPVTVQLTKLEY
SLGSKVIVFTQYIEQAEEIYEELKKELGVKVALITSKTSNRDDIFERFRLGNVKVLVTTTVLDEGIDVPDADVAVVVSGT
GSPRQMIQRVGRVVRQTEGKVEARVYEIIARNTIEEALSNERHPDDEVYEKECRKYDEKDLSLLLNRVKAIVSKLKEQGS
MLKYVK

Sequences:

>Translated_886_residues
MVEFKVNVNGVLIKRQWNWGTVVKVKDELKRMGFKWNPSDTTWVGKLSRINDVEKLRELLRLSASEYELIVKPLLKASIK
VPKVPEEFKQCAMGNRVNVPCVAKLIMEDEYVEAESFEDYVTKLVGKAMEKLGVKSDDAVEEAVKILLNDHSLRETYGRR
IEWRLAIVDNGKVTLNFLAKGLLKSLREIRIPYNTVDKQGNLNRYEIPVIGRDDVYRDGDKWIIRFPVFEKQTIESLLRK
LGYVIKEVEWKPRSIPVPKDNVNLLDFQRNALEAWVKNGYKGTVVIPTGGGKTFIALKAIATVKVPTIILVVTEELMNQW
HDRIRRMLGIEAGRLGGGFNEIKDVTVAIYNSAVKYIGDIRDRFDLAIFDECLPYDALVITDKGLIPIGEIVEKRLPVKV
LTHKGRFMRITNYFKIPLVKRLVRITHEKGELTVTEDHLILTQNGWKPAIELRNGDLLYFYNTQAPQGRIQSGLNLREPL
YGKQPKPMNNEPTKVATTLGDDDIIKDSGQGLLLINSMGNKRYEAKHDSYFTPVRVLSVNVLVDKDHDNAIRQSLPSPYA
EHEVDEGIPKINPVTGIRGILGGVGVVYDIEVEEDHSFIADGVVVHNCHHVPAETFKNVAFKLTAPYRLALSATPTRKDG
NEELIYLTSGGVVHKATYLDMVHAGLVVPIRHFRIYVKLSEDEVKEYRSIGEDNAIMLRNTAAQAKAKIPVTVQLTKLEY
SLGSKVIVFTQYIEQAEEIYEELKKELGVKVALITSKTSNRDDIFERFRLGNVKVLVTTTVLDEGIDVPDADVAVVVSGT
GSPRQMIQRVGRVVRQTEGKVEARVYEIIARNTIEEALSNERHPDDEVYEKECRKYDEKDLSLLLNRVKAIVSKLKEQGS
MLKYVK
>Mature_886_residues
MVEFKVNVNGVLIKRQWNWGTVVKVKDELKRMGFKWNPSDTTWVGKLSRINDVEKLRELLRLSASEYELIVKPLLKASIK
VPKVPEEFKQCAMGNRVNVPCVAKLIMEDEYVEAESFEDYVTKLVGKAMEKLGVKSDDAVEEAVKILLNDHSLRETYGRR
IEWRLAIVDNGKVTLNFLAKGLLKSLREIRIPYNTVDKQGNLNRYEIPVIGRDDVYRDGDKWIIRFPVFEKQTIESLLRK
LGYVIKEVEWKPRSIPVPKDNVNLLDFQRNALEAWVKNGYKGTVVIPTGGGKTFIALKAIATVKVPTIILVVTEELMNQW
HDRIRRMLGIEAGRLGGGFNEIKDVTVAIYNSAVKYIGDIRDRFDLAIFDECLPYDALVITDKGLIPIGEIVEKRLPVKV
LTHKGRFMRITNYFKIPLVKRLVRITHEKGELTVTEDHLILTQNGWKPAIELRNGDLLYFYNTQAPQGRIQSGLNLREPL
YGKQPKPMNNEPTKVATTLGDDDIIKDSGQGLLLINSMGNKRYEAKHDSYFTPVRVLSVNVLVDKDHDNAIRQSLPSPYA
EHEVDEGIPKINPVTGIRGILGGVGVVYDIEVEEDHSFIADGVVVHNCHHVPAETFKNVAFKLTAPYRLALSATPTRKDG
NEELIYLTSGGVVHKATYLDMVHAGLVVPIRHFRIYVKLSEDEVKEYRSIGEDNAIMLRNTAAQAKAKIPVTVQLTKLEY
SLGSKVIVFTQYIEQAEEIYEELKKELGVKVALITSKTSNRDDIFERFRLGNVKVLVTTTVLDEGIDVPDADVAVVVSGT
GSPRQMIQRVGRVVRQTEGKVEARVYEIIARNTIEEALSNERHPDDEVYEKECRKYDEKDLSLLLNRVKAIVSKLKEQGS
MLKYVK

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4557563, Length=249, Percent_Identity=25.3012048192771, Blast_Score=72, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17556358, Length=265, Percent_Identity=22.6415094339623, Blast_Score=67, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6322048, Length=255, Percent_Identity=22.3529411764706, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI221331068, Length=249, Percent_Identity=23.2931726907631, Blast_Score=74, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24662247, Length=249, Percent_Identity=23.2931726907631, Blast_Score=74, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 100436; Mature: 100436

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: PS50817 INTEIN_N_TER ; PS50818 INTEIN_C_TER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEFKVNVNGVLIKRQWNWGTVVKVKDELKRMGFKWNPSDTTWVGKLSRINDVEKLRELL
CEEEEEECCEEEEEEECCCCEEEEEHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHH
RLSASEYELIVKPLLKASIKVPKVPEEFKQCAMGNRVNVPCVAKLIMEDEYVEAESFEDY
HCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHH
VTKLVGKAMEKLGVKSDDAVEEAVKILLNDHSLRETYGRRIEWRLAIVDNGKVTLNFLAK
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHCCEEEEEEEEEECCCEEHHHHHH
GLLKSLREIRIPYNTVDKQGNLNRYEIPVIGRDDVYRDGDKWIIRFPVFEKQTIESLLRK
HHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHH
LGYVIKEVEWKPRSIPVPKDNVNLLDFQRNALEAWVKNGYKGTVVIPTGGGKTFIALKAI
HHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEH
ATVKVPTIILVVTEELMNQWHDRIRRMLGIEAGRLGGGFNEIKDVTVAIYNSAVKYIGDI
HHEECCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RDRFDLAIFDECLPYDALVITDKGLIPIGEIVEKRLPVKVLTHKGRFMRITNYFKIPLVK
HHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCEEEEECCCCEEEEECEEHHHHHH
RLVRITHEKGELTVTEDHLILTQNGWKPAIELRNGDLLYFYNTQAPQGRIQSGLNLREPL
HHHHHHCCCCCEEEECCEEEEEECCCCCEEEECCCCEEEEECCCCCCHHHHCCCCCCCCC
YGKQPKPMNNEPTKVATTLGDDDIIKDSGQGLLLINSMGNKRYEAKHDSYFTPVRVLSVN
CCCCCCCCCCCCCEEEEECCCCCCEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEE
VLVDKDHDNAIRQSLPSPYAEHEVDEGIPKINPVTGIRGILGGVGVVYDIEVEEDHSFIA
EEEECCCCHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCHH
DGVVVHNCHHVPAETFKNVAFKLTAPYRLALSATPTRKDGNEELIYLTSGGVVHKATYLD
CCEEEECCCCCCHHHHCCEEEEEECCEEEEEECCCCCCCCCCEEEEEECCCEEEHHHHHH
MVHAGLVVPIRHFRIYVKLSEDEVKEYRSIGEDNAIMLRNTAAQAKAKIPVTVQLTKLEY
HHHCCHHEEEEEEEEEEEECHHHHHHHHHCCCCCEEEEECCHHHCCCCCCEEEEEEEEEC
SLGSKVIVFTQYIEQAEEIYEELKKELGVKVALITSKTSNRDDIFERFRLGNVKVLVTTT
CCCCEEEEHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHCCCCEEEEEEEE
VLDEGIDVPDADVAVVVSGTGSPRQMIQRVGRVVRQTEGKVEARVYEIIARNTIEEALSN
EHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
ERHPDDEVYEKECRKYDEKDLSLLLNRVKAIVSKLKEQGSMLKYVK
CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MVEFKVNVNGVLIKRQWNWGTVVKVKDELKRMGFKWNPSDTTWVGKLSRINDVEKLRELL
CEEEEEECCEEEEEEECCCCEEEEEHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHH
RLSASEYELIVKPLLKASIKVPKVPEEFKQCAMGNRVNVPCVAKLIMEDEYVEAESFEDY
HCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHH
VTKLVGKAMEKLGVKSDDAVEEAVKILLNDHSLRETYGRRIEWRLAIVDNGKVTLNFLAK
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHCCEEEEEEEEEECCCEEHHHHHH
GLLKSLREIRIPYNTVDKQGNLNRYEIPVIGRDDVYRDGDKWIIRFPVFEKQTIESLLRK
HHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHH
LGYVIKEVEWKPRSIPVPKDNVNLLDFQRNALEAWVKNGYKGTVVIPTGGGKTFIALKAI
HHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEH
ATVKVPTIILVVTEELMNQWHDRIRRMLGIEAGRLGGGFNEIKDVTVAIYNSAVKYIGDI
HHEECCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RDRFDLAIFDECLPYDALVITDKGLIPIGEIVEKRLPVKVLTHKGRFMRITNYFKIPLVK
HHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCEEEEECCCCEEEEECEEHHHHHH
RLVRITHEKGELTVTEDHLILTQNGWKPAIELRNGDLLYFYNTQAPQGRIQSGLNLREPL
HHHHHHCCCCCEEEECCEEEEEECCCCCEEEECCCCEEEEECCCCCCHHHHCCCCCCCCC
YGKQPKPMNNEPTKVATTLGDDDIIKDSGQGLLLINSMGNKRYEAKHDSYFTPVRVLSVN
CCCCCCCCCCCCCEEEEECCCCCCEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEE
VLVDKDHDNAIRQSLPSPYAEHEVDEGIPKINPVTGIRGILGGVGVVYDIEVEEDHSFIA
EEEECCCCHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCHH
DGVVVHNCHHVPAETFKNVAFKLTAPYRLALSATPTRKDGNEELIYLTSGGVVHKATYLD
CCEEEECCCCCCHHHHCCEEEEEECCEEEEEECCCCCCCCCCEEEEEECCCEEEHHHHHH
MVHAGLVVPIRHFRIYVKLSEDEVKEYRSIGEDNAIMLRNTAAQAKAKIPVTVQLTKLEY
HHHCCHHEEEEEEEEEEEECHHHHHHHHHCCCCCEEEEECCHHHCCCCCCEEEEEEEEEC
SLGSKVIVFTQYIEQAEEIYEELKKELGVKVALITSKTSNRDDIFERFRLGNVKVLVTTT
CCCCEEEEHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHCCCCEEEEEEEE
VLDEGIDVPDADVAVVVSGTGSPRQMIQRVGRVVRQTEGKVEARVYEIIARNTIEEALSN
EHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
ERHPDDEVYEKECRKYDEKDLSLLLNRVKAIVSKLKEQGSMLKYVK
CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA