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The map label for this gene is 159041352

Identifier: 159041352

GI number: 159041352

Start: 814248

End: 814967

Strand: Reverse

Name: 159041352

Synonym: Cmaq_0779

Alternate gene names: NA

Gene position: 814967-814248 (Counterclockwise)

Preceding gene: 159041353

Following gene: 159041350

Centisome position: 39.23

GC content: 34.03

Gene sequence:

>720_bases
GTGGACTACTTACTCGATTTCGGAAAAATGAGCTTTAAGTACATTGAGTTTGATTATGTCCACGAAACTGATTGGACAGC
TAAAGCCACATTTGATGGTTACGAGTATAATGTAGTGGAGTCCTATGTTGATGGATTAAAGAACCATGTCTACGAGTTTG
CAGTACTTAAGGTTAAGGATAAGCTAAGTCTAAGGAAATTATTCAACATACTTAGCAATGACCCAAGCGTTGATGAATTA
GTTAAATTTAAACCAATGAATAAGGGTTACCCAAAGAGAATTGGGATCGTTATTAAATCTAGGTTAAGTAACTCAACTAG
GTATAAGGCTAGGTTATTTGATGGCATTGAGGTTAAGGATTATATAACAAATGGTGTTGAGAATTGGGGATTCCTATTCC
CAGTTAATGTTAACTTAGATCTACTTTTCAATGGTCTTAAGATTAATGGAAAAATAATTAATGTACGCTCAAGGAACGTT
AACATAAATGACGTATTAAGTTTAGTCATCTCCAATAAGATAACCTCAGTATTAACTAAGGCTGAATTAGACACGTTATA
TAAGGTTTACAAGTTAGGCTTCTTCAATGAACCAAGGGAAGCCAGCCTAAGAACATTAGCTAAGGAACTTGACCTATCAA
CAAGCACCATTAGTCACCAACTAAGGAGCAGCATAAGAAAAATACTTAACGCAATATTCAGTAATAATGAATATATTTAA

Upstream 100 bases:

>100_bases
TAAAGCCCTAAGAAAGATACCTCAACATAATGAAGCCTTGGATTCATTAAGTACTATTTTTGAATAAAATATAAAAATAA
GTCAAAAAATAAAACACTAC

Downstream 100 bases:

>100_bases
TTGTTTCATTAATTAGGAAAGCTATAGATCTAAGAAATTAAAAATTTAATTTTTAACTAGATTTAAGATTAATGATACCT
CATCTTCTTCTTAATGCTAT

Product: bacterio-opsin activator

Products: NA

Alternate protein names: Bacterio-Opsin Activator HTH Domain-Containing Protein

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MDYLLDFGKMSFKYIEFDYVHETDWTAKATFDGYEYNVVESYVDGLKNHVYEFAVLKVKDKLSLRKLFNILSNDPSVDEL
VKFKPMNKGYPKRIGIVIKSRLSNSTRYKARLFDGIEVKDYITNGVENWGFLFPVNVNLDLLFNGLKINGKIINVRSRNV
NINDVLSLVISNKITSVLTKAELDTLYKVYKLGFFNEPREASLRTLAKELDLSTSTISHQLRSSIRKILNAIFSNNEYI

Sequences:

>Translated_239_residues
MDYLLDFGKMSFKYIEFDYVHETDWTAKATFDGYEYNVVESYVDGLKNHVYEFAVLKVKDKLSLRKLFNILSNDPSVDEL
VKFKPMNKGYPKRIGIVIKSRLSNSTRYKARLFDGIEVKDYITNGVENWGFLFPVNVNLDLLFNGLKINGKIINVRSRNV
NINDVLSLVISNKITSVLTKAELDTLYKVYKLGFFNEPREASLRTLAKELDLSTSTISHQLRSSIRKILNAIFSNNEYI
>Mature_239_residues
MDYLLDFGKMSFKYIEFDYVHETDWTAKATFDGYEYNVVESYVDGLKNHVYEFAVLKVKDKLSLRKLFNILSNDPSVDEL
VKFKPMNKGYPKRIGIVIKSRLSNSTRYKARLFDGIEVKDYITNGVENWGFLFPVNVNLDLLFNGLKINGKIINVRSRNV
NINDVLSLVISNKITSVLTKAELDTLYKVYKLGFFNEPREASLRTLAKELDLSTSTISHQLRSSIRKILNAIFSNNEYI

Specific function: Unknown

COG id: COG3413

COG function: function code R; Predicted DNA binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27609; Mature: 27609

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYLLDFGKMSFKYIEFDYVHETDWTAKATFDGYEYNVVESYVDGLKNHVYEFAVLKVKD
CCCHHCCCCCEEEEEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHEEEEHH
KLSLRKLFNILSNDPSVDELVKFKPMNKGYPKRIGIVIKSRLSNSTRYKARLFDGIEVKD
HHHHHHHHHHHCCCCCHHHHHEECCCCCCCCHHHHHHHHHHCCCCCCEEHHHHCCCCHHH
YITNGVENWGFLFPVNVNLDLLFNGLKINGKIINVRSRNVNINDVLSLVISNKITSVLTK
HHHCCCCCCCEEEEEECCCEEEEECEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
AELDTLYKVYKLGFFNEPREASLRTLAKELDLSTSTISHQLRSSIRKILNAIFSNNEYI
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDYLLDFGKMSFKYIEFDYVHETDWTAKATFDGYEYNVVESYVDGLKNHVYEFAVLKVKD
CCCHHCCCCCEEEEEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHEEEEHH
KLSLRKLFNILSNDPSVDELVKFKPMNKGYPKRIGIVIKSRLSNSTRYKARLFDGIEVKD
HHHHHHHHHHHCCCCCHHHHHEECCCCCCCCHHHHHHHHHHCCCCCCEEHHHHCCCCHHH
YITNGVENWGFLFPVNVNLDLLFNGLKINGKIINVRSRNVNINDVLSLVISNKITSVLTK
HHHCCCCCCCEEEEEECCCEEEEECEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
AELDTLYKVYKLGFFNEPREASLRTLAKELDLSTSTISHQLRSSIRKILNAIFSNNEYI
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA