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The map label for this gene is ycjS [H]

Identifier: 159041321

GI number: 159041321

Start: 778269

End: 779345

Strand: Reverse

Name: ycjS [H]

Synonym: Cmaq_0747

Alternate gene names: 159041321

Gene position: 779345-778269 (Counterclockwise)

Preceding gene: 159041322

Following gene: 159041318

Centisome position: 37.51

GC content: 44.48

Gene sequence:

>1077_bases
ATGGAGAAGGTTAGGGTTGGGGTCATCGGTGTTGGGGGTCATGGTAGGGGTAGGCATTTAATACCTTACACTAAGTTGCC
TAATGTTGAAGTTGTTGCTGTTGCTGATGTTAACCCTAAGAGGGCTGAGGCTGTTGGTAATGAGTTTAAGGTTAAGTATT
ATACGGATTACCTTGAGATGATTGATAGGGAAAACCTTGATGCAGTCAGTATAGTAACACCCACCGGCCTCCATGCTAGG
GTTGCTAAGGATGTTTTAAGCAAGGGTGTTCATGTTCTAGTGGATAAGCCGCTTGGGGCTAATTTAAATGAGGTTATTGA
TGTTGTTAGGACAGCTAAGGCTAAGGGTAAGATACTCATGGTTGGTTACTGGTCCAGGTTCTCTCAAGCCCTTAAGTTTG
GCGCTGAGGCAATGAAACTGGGTATGGTTGGTGAACCCTACTTAGCCTACGGTTACCTAGTTAGGAGGAGGGGTATTCCA
GGTGTACCGACTTTCATTGATAAGGAATTATCAGGCGGTAGGGGGGCTTTACTTGATATAGGTTGCTACATCCTGGATAA
CCTACTATTCCTACTGGGATTCCCTAAACCAGTTACAGTAAGTGGGGCCACGTACACTAAGTTCGGTAGGAATCCTGAGG
AGGTTAAGTTTAACTGGGGTTCATGGGATCCAGGTAAGTTTGAGCTTGAGGATTACGCGGTGGGTTTTGTTAGGTTTGAG
AATGGTGCATCAATGATTATTGAGGTTGGTTGGGCAGCCAATGTATCGCATGTAGGTGAGGTGGGTGTGTACAGGGTGCT
TGGTGATAAGGGTGGATTAGAGGGTAAGGGTCATGAGTCAGTCACTGAAATGAGCCTACACAGTAGGACCAGTAATTTCC
TCTACGATATGAAGCCAATAATAAGCAATGTTGATATGCCCCTTGAAATGGTTAAAGCCTTCATAGATTCAATTACCCAG
AATAAGGAACCACCCACGACAGGTTACCAAAGCATAATAATACACTCAATAATAGATGCAGTGTATGAGTCAGCAGTAAA
GGGTAGTGAAGTAAGGGTTACGTTACCTGAGGTTTAG

Upstream 100 bases:

>100_bases
ATTAACTCTATGTTTAACAGTGTTCCGTATTTTGAGAGAAGTTAACTAAATCATTCGGGATTATTAATAACTTTAAAAGG
AAACTAATCCCCCTAAATTT

Downstream 100 bases:

>100_bases
TGAATGCATGATCTTATTTTCGGTTAAATGATTAAACCACTGAAAATATGCCTTAAAGGATTAGGATTAAGGCACTAACC
TATACCTGTCCCTTGGGAAT

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MEKVRVGVIGVGGHGRGRHLIPYTKLPNVEVVAVADVNPKRAEAVGNEFKVKYYTDYLEMIDRENLDAVSIVTPTGLHAR
VAKDVLSKGVHVLVDKPLGANLNEVIDVVRTAKAKGKILMVGYWSRFSQALKFGAEAMKLGMVGEPYLAYGYLVRRRGIP
GVPTFIDKELSGGRGALLDIGCYILDNLLFLLGFPKPVTVSGATYTKFGRNPEEVKFNWGSWDPGKFELEDYAVGFVRFE
NGASMIIEVGWAANVSHVGEVGVYRVLGDKGGLEGKGHESVTEMSLHSRTSNFLYDMKPIISNVDMPLEMVKAFIDSITQ
NKEPPTTGYQSIIIHSIIDAVYESAVKGSEVRVTLPEV

Sequences:

>Translated_358_residues
MEKVRVGVIGVGGHGRGRHLIPYTKLPNVEVVAVADVNPKRAEAVGNEFKVKYYTDYLEMIDRENLDAVSIVTPTGLHAR
VAKDVLSKGVHVLVDKPLGANLNEVIDVVRTAKAKGKILMVGYWSRFSQALKFGAEAMKLGMVGEPYLAYGYLVRRRGIP
GVPTFIDKELSGGRGALLDIGCYILDNLLFLLGFPKPVTVSGATYTKFGRNPEEVKFNWGSWDPGKFELEDYAVGFVRFE
NGASMIIEVGWAANVSHVGEVGVYRVLGDKGGLEGKGHESVTEMSLHSRTSNFLYDMKPIISNVDMPLEMVKAFIDSITQ
NKEPPTTGYQSIIIHSIIDAVYESAVKGSEVRVTLPEV
>Mature_358_residues
MEKVRVGVIGVGGHGRGRHLIPYTKLPNVEVVAVADVNPKRAEAVGNEFKVKYYTDYLEMIDRENLDAVSIVTPTGLHAR
VAKDVLSKGVHVLVDKPLGANLNEVIDVVRTAKAKGKILMVGYWSRFSQALKFGAEAMKLGMVGEPYLAYGYLVRRRGIP
GVPTFIDKELSGGRGALLDIGCYILDNLLFLLGFPKPVTVSGATYTKFGRNPEEVKFNWGSWDPGKFELEDYAVGFVRFE
NGASMIIEVGWAANVSHVGEVGVYRVLGDKGGLEGKGHESVTEMSLHSRTSNFLYDMKPIISNVDMPLEMVKAFIDSITQ
NKEPPTTGYQSIIIHSIIDAVYESAVKGSEVRVTLPEV

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=179, Percent_Identity=30.1675977653631, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI1787574, Length=354, Percent_Identity=28.8135593220339, Blast_Score=152, Evalue=4e-38,
Organism=Escherichia coli, GI87081947, Length=202, Percent_Identity=25.7425742574257, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 39236; Mature: 39236

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKVRVGVIGVGGHGRGRHLIPYTKLPNVEVVAVADVNPKRAEAVGNEFKVKYYTDYLEM
CCCEEEEEEEECCCCCCCEECCCCCCCCEEEEEEECCCCHHHHHCCCCEEEEEHHHHHHH
IDRENLDAVSIVTPTGLHARVAKDVLSKGVHVLVDKPLGANLNEVIDVVRTAKAKGKILM
HCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEE
VGYWSRFSQALKFGAEAMKLGMVGEPYLAYGYLVRRRGIPGVPTFIDKELSGGRGALLDI
EECHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHH
GCYILDNLLFLLGFPKPVTVSGATYTKFGRNPEEVKFNWGSWDPGKFELEDYAVGFVRFE
HHHHHHHHHHHHCCCCCEEECCCCHHHCCCCHHHEEEECCCCCCCCEEEHHEEEEEEEEC
NGASMIIEVGWAANVSHVGEVGVYRVLGDKGGLEGKGHESVTEMSLHSRTSNFLYDMKPI
CCCEEEEEECCCCCCCHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ISNVDMPLEMVKAFIDSITQNKEPPTTGYQSIIIHSIIDAVYESAVKGSEVRVTLPEV
HCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
>Mature Secondary Structure
MEKVRVGVIGVGGHGRGRHLIPYTKLPNVEVVAVADVNPKRAEAVGNEFKVKYYTDYLEM
CCCEEEEEEEECCCCCCCEECCCCCCCCEEEEEEECCCCHHHHHCCCCEEEEEHHHHHHH
IDRENLDAVSIVTPTGLHARVAKDVLSKGVHVLVDKPLGANLNEVIDVVRTAKAKGKILM
HCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEE
VGYWSRFSQALKFGAEAMKLGMVGEPYLAYGYLVRRRGIPGVPTFIDKELSGGRGALLDI
EECHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHH
GCYILDNLLFLLGFPKPVTVSGATYTKFGRNPEEVKFNWGSWDPGKFELEDYAVGFVRFE
HHHHHHHHHHHHCCCCCEEECCCCHHHCCCCHHHEEEECCCCCCCCEEEHHEEEEEEEEC
NGASMIIEVGWAANVSHVGEVGVYRVLGDKGGLEGKGHESVTEMSLHSRTSNFLYDMKPI
CCCEEEEEECCCCCCCHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ISNVDMPLEMVKAFIDSITQNKEPPTTGYQSIIIHSIIDAVYESAVKGSEVRVTLPEV
HCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]