| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041235
Identifier: 159041235
GI number: 159041235
Start: 693802
End: 693996
Strand: Reverse
Name: 159041235
Synonym: Cmaq_0657
Alternate gene names: NA
Gene position: 693996-693802 (Counterclockwise)
Preceding gene: 159041236
Following gene: 159041232
Centisome position: 33.4
GC content: 43.08
Gene sequence:
>195_bases ATGAGTAGGGCAAGGGGATTCAGAAGCATTAGGAGCAAGGAATTAGTGTGCTTCTTCTGTCTCAGGACCATTAAACCAAG TGAGGCTAAGGTTGTTGTAATTAATGATGAGTTAATAGGAATGAATTTCAAGGTTATTGCCTGCAGTGAATGCGCAGCCA AGTACGGGGAGTCAATTAGGCTTAAGGCCTCATAG
Upstream 100 bases:
>100_bases TAGGGTTAGGGATCTTGAGACCTGGAGTGAGGAGGACGTGCCCTTAGATAAGATCCTTAAGTAATCCTTATAAGGCTAAT CCAAGACTCCTTAGTTAATA
Downstream 100 bases:
>100_bases GCATTGATTCCCGTAAACCTCAAGGACAGCCTTAAGATCCCTAAGGGCAACCTCAGGGGGCATTGGGACGGGTTTATCCT CCTCAATGGACTTAATGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 63
Protein sequence:
>64_residues MSRARGFRSIRSKELVCFFCLRTIKPSEAKVVVINDELIGMNFKVIACSECAAKYGESIRLKAS
Sequences:
>Translated_64_residues MSRARGFRSIRSKELVCFFCLRTIKPSEAKVVVINDELIGMNFKVIACSECAAKYGESIRLKAS >Mature_63_residues SRARGFRSIRSKELVCFFCLRTIKPSEAKVVVINDELIGMNFKVIACSECAAKYGESIRLKAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7173; Mature: 7041
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 9.4 %Cys+Met (Translated Protein) 6.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRARGFRSIRSKELVCFFCLRTIKPSEAKVVVINDELIGMNFKVIACSECAAKYGESIR CCCCCCCCHHCCCCEEEEEEECCCCCCCCEEEEECCCEECCEEEEEEECHHHHHCCCEEE LKAS EEEC >Mature Secondary Structure SRARGFRSIRSKELVCFFCLRTIKPSEAKVVVINDELIGMNFKVIACSECAAKYGESIR CCCCCCCHHCCCCEEEEEEECCCCCCCCEEEEECCCEECCEEEEEEECHHHHHCCCEEE LKAS EEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA