Definition Caldivirga maquilingensis IC-167 chromosome, complete genome.
Accession NC_009954
Length 2,077,567

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The map label for this gene is 159041232

Identifier: 159041232

GI number: 159041232

Start: 689921

End: 692353

Strand: Reverse

Name: 159041232

Synonym: Cmaq_0654

Alternate gene names: NA

Gene position: 692353-689921 (Counterclockwise)

Preceding gene: 159041235

Following gene: 159041230

Centisome position: 33.33

GC content: 43.65

Gene sequence:

>2433_bases
ATGAGAATACATAAGACATATGTACTATTAATAGTAGCATCAGTAATGGTTCTAATAGCGTTAAACATCGCATACGCCTC
AAGCGGGTACACGATAATTTACTGGAACTCCTACGGTACGTTAACAGTACCCCCAGGTACACCCATATGCAATATATGGA
ATCCTAAGGCTCTTTGGTCATTTATTAATGCATGGGAGTCATTAGCCTACTACAATACTTATAATGGTCAATGGTGGCCT
GTCCTAGCCAGTAATTGGACATTATTCCCCCAGAATGATACAATTATAATTCATTTACGTAGGGGCTTAGTTTGGTTTAA
TGGCTCAGCCACAATGCCTTTCACAGCTTGGGATGTTTACGCTGAATTCTACATTGGGGTTAAGGCATTTGACTGGTGGT
ATCCATATGTTAATGCTGATGGTATAAGGGTTATTAATAACTACACATTATCCATTCAATTAACAGCATGGAGTCCAACA
ACCATATTATTCATGCTGACTGAACCCATAACTACACCATGGCCTTACTGGGAACCTGTTGTTAAGGCCTTGAAGACCAT
GAACTCCACGTACGCCTTAACAGTTTATGGCCCTAATAATGTAACCACGTGGAATCCACCATGCTGGTCACTTGCACCAT
ACTACTTCGTGGCCTTCTACCCAGGAACAGCCACATTCGTTACACAGCTTGAGCCACCTAACATATTGAGGCAATGGTAT
AATATATTCCCATACGAGGATTGGCAGTATTACCCAGTAATTGATTATGTTCAAGTTCTCGGTAATACACAGGCATTAAC
AGGCTTATTATCAGGTAAGGCCACGTGGTCGTCCGTGGCTCTTTCACTGGCGCAGATTGGGGTAGTTAATAAGTCTGGGT
TACTGGCCTACATGGTTGAGGAATTTGGGGAATTAGGCATGGCAATTAATCCACTTGGCGGTTACCCATTCAACACAACC
CAGTTCAGAAAGGCACTATGCTATGCTGTTAACTTAACAGCCGCAATTGCAGTATGGGGTATTGGTACATATTATCCATC
TTACTATCCCGCGCCAGTATTCCCAACCACTATTGATACATACCCACCCAGCGTTAAGCAGTTCATAATACCATGCAGTT
ACAATACCACTAAAGCCGCTGAGTTACTTGAAAGCATTGGCATGTATAAGAAGGGTAACCAATGGTACCTGCCTAATGGT
ACACCATTAACATTAACCGTAATTACACCTTCAGGCTTCACTGATTGGGCCACCATAACAGAAGGCTGGGCAACCCAATT
AAGCTTATTTGGCATACCCACTAAGGTATTGGCTTTAGATACTGGCACATACTGGAGCAGCATATTCCCAAGTGCTCAAT
TTGAGGTCGCCAATACGTTGTCGAGTTACGGTAGAGGGTACTATGATCCAACCGGCCTAGCATTCCAGGGACCATTAGAG
TGGATACCATGGGTTACTGAATTGGGGATTTATACTTGGCCATTCCAGTGGCCTAATGGAACATGCACACCAGTGGTAAT
ACATCTTCCACCCTCAGCCAATAGTAGCCTAGTACCTGCCAATGGTACTGTAGTCTGGTGCATTAACTCAACTCTTGGGT
ACATTAACTTAACCAACTGGTTCACGCTATATGATGCCGCAACACCAGGTACTCACCAGTATAATGAATTGCTTAAGGTT
CTATTCGCCTGGTATGATTACTATGTTCCAATAGTGCCCGTTGGTTGGAAGAGGGCTGAGGTTAACATTGGTCCTAAGAA
TTACTTAATCACCTGGGCTTACAATGTGCCTAACCCCATGTGCGAGAAATACATACCACCGTGGCTTAGGATTGAGTTAA
TGCCATCAGATAACTCATACATAATCGGTGCTGAGGCTTATTACTATCAGGTCATTAGCTCCCCAGTATGGGAGGCCTTC
TGGGGTAGTGGCGCCCCAGCTGGTGCAGTACCCCCATTGATTGAGGCCATGGTTAACGGTAGCCTATGGATCAAGCACCC
TGATTACGCGGAATTCCTAGGCTTAACACCAAGTTACTTAACAGACCTAAACCAGTTAAGGTATTGTCTAGCCCAGTACT
TCAACATAACCTCAGAGTATGTTCCATCAATAATAACCACAAGTACTACTACAACAACCACCACGACGACTACTTCAACG
ACCACGACATCAACTACAACAACTACCCCAGTGACTACATCAGCAACTACTTCAACTACTACAAGCACTGTGACTACTAC
GGCAGTTAGTACAGTGGTGAGTACTGTTACAACCACTGCAGTATCAACAGTGACTAGCACAGCAACAACCACAGCAGTAA
GCACCGTAACAGTCACAAAACCAGTGGTATCAACAGCATTAATAGCAGGAATAGTAATCATAGTAATCGTAATAGCAGCA
GTAGCAGCAATAATAGCGTTGAGGAGAAGATGA

Upstream 100 bases:

>100_bases
ATAGCATTATATAGCACTATTAATAATAAATATACTTACTCAAATCCTACTTAGAAAAACACTTATTAAGATCCATAACT
AGGGATAAGTGGTGGAGTGA

Downstream 100 bases:

>100_bases
GAAAAGCAAAGAATTAAAAGTTAAAAATCAAATTTTTATTTACAATTTTTTGTTTAGAGCCAGTGATACTTAGGTTAGTG
CCAAGATATGGTTTTCAAAA

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 810; Mature: 810

Protein sequence:

>810_residues
MRIHKTYVLLIVASVMVLIALNIAYASSGYTIIYWNSYGTLTVPPGTPICNIWNPKALWSFINAWESLAYYNTYNGQWWP
VLASNWTLFPQNDTIIIHLRRGLVWFNGSATMPFTAWDVYAEFYIGVKAFDWWYPYVNADGIRVINNYTLSIQLTAWSPT
TILFMLTEPITTPWPYWEPVVKALKTMNSTYALTVYGPNNVTTWNPPCWSLAPYYFVAFYPGTATFVTQLEPPNILRQWY
NIFPYEDWQYYPVIDYVQVLGNTQALTGLLSGKATWSSVALSLAQIGVVNKSGLLAYMVEEFGELGMAINPLGGYPFNTT
QFRKALCYAVNLTAAIAVWGIGTYYPSYYPAPVFPTTIDTYPPSVKQFIIPCSYNTTKAAELLESIGMYKKGNQWYLPNG
TPLTLTVITPSGFTDWATITEGWATQLSLFGIPTKVLALDTGTYWSSIFPSAQFEVANTLSSYGRGYYDPTGLAFQGPLE
WIPWVTELGIYTWPFQWPNGTCTPVVIHLPPSANSSLVPANGTVVWCINSTLGYINLTNWFTLYDAATPGTHQYNELLKV
LFAWYDYYVPIVPVGWKRAEVNIGPKNYLITWAYNVPNPMCEKYIPPWLRIELMPSDNSYIIGAEAYYYQVISSPVWEAF
WGSGAPAGAVPPLIEAMVNGSLWIKHPDYAEFLGLTPSYLTDLNQLRYCLAQYFNITSEYVPSIITTSTTTTTTTTTTST
TTTSTTTTTPVTTSATTSTTTSTVTTTAVSTVVSTVTTTAVSTVTSTATTTAVSTVTVTKPVVSTALIAGIVIIVIVIAA
VAAIIALRRR

Sequences:

>Translated_810_residues
MRIHKTYVLLIVASVMVLIALNIAYASSGYTIIYWNSYGTLTVPPGTPICNIWNPKALWSFINAWESLAYYNTYNGQWWP
VLASNWTLFPQNDTIIIHLRRGLVWFNGSATMPFTAWDVYAEFYIGVKAFDWWYPYVNADGIRVINNYTLSIQLTAWSPT
TILFMLTEPITTPWPYWEPVVKALKTMNSTYALTVYGPNNVTTWNPPCWSLAPYYFVAFYPGTATFVTQLEPPNILRQWY
NIFPYEDWQYYPVIDYVQVLGNTQALTGLLSGKATWSSVALSLAQIGVVNKSGLLAYMVEEFGELGMAINPLGGYPFNTT
QFRKALCYAVNLTAAIAVWGIGTYYPSYYPAPVFPTTIDTYPPSVKQFIIPCSYNTTKAAELLESIGMYKKGNQWYLPNG
TPLTLTVITPSGFTDWATITEGWATQLSLFGIPTKVLALDTGTYWSSIFPSAQFEVANTLSSYGRGYYDPTGLAFQGPLE
WIPWVTELGIYTWPFQWPNGTCTPVVIHLPPSANSSLVPANGTVVWCINSTLGYINLTNWFTLYDAATPGTHQYNELLKV
LFAWYDYYVPIVPVGWKRAEVNIGPKNYLITWAYNVPNPMCEKYIPPWLRIELMPSDNSYIIGAEAYYYQVISSPVWEAF
WGSGAPAGAVPPLIEAMVNGSLWIKHPDYAEFLGLTPSYLTDLNQLRYCLAQYFNITSEYVPSIITTSTTTTTTTTTTST
TTTSTTTTTPVTTSATTSTTTSTVTTTAVSTVVSTVTTTAVSTVTSTATTTAVSTVTVTKPVVSTALIAGIVIIVIVIAA
VAAIIALRRR
>Mature_810_residues
MRIHKTYVLLIVASVMVLIALNIAYASSGYTIIYWNSYGTLTVPPGTPICNIWNPKALWSFINAWESLAYYNTYNGQWWP
VLASNWTLFPQNDTIIIHLRRGLVWFNGSATMPFTAWDVYAEFYIGVKAFDWWYPYVNADGIRVINNYTLSIQLTAWSPT
TILFMLTEPITTPWPYWEPVVKALKTMNSTYALTVYGPNNVTTWNPPCWSLAPYYFVAFYPGTATFVTQLEPPNILRQWY
NIFPYEDWQYYPVIDYVQVLGNTQALTGLLSGKATWSSVALSLAQIGVVNKSGLLAYMVEEFGELGMAINPLGGYPFNTT
QFRKALCYAVNLTAAIAVWGIGTYYPSYYPAPVFPTTIDTYPPSVKQFIIPCSYNTTKAAELLESIGMYKKGNQWYLPNG
TPLTLTVITPSGFTDWATITEGWATQLSLFGIPTKVLALDTGTYWSSIFPSAQFEVANTLSSYGRGYYDPTGLAFQGPLE
WIPWVTELGIYTWPFQWPNGTCTPVVIHLPPSANSSLVPANGTVVWCINSTLGYINLTNWFTLYDAATPGTHQYNELLKV
LFAWYDYYVPIVPVGWKRAEVNIGPKNYLITWAYNVPNPMCEKYIPPWLRIELMPSDNSYIIGAEAYYYQVISSPVWEAF
WGSGAPAGAVPPLIEAMVNGSLWIKHPDYAEFLGLTPSYLTDLNQLRYCLAQYFNITSEYVPSIITTSTTTTTTTTTTST
TTTSTTTTTPVTTSATTSTTTSTVTTTAVSTVVSTVTTTAVSTVTSTATTTAVSTVTVTKPVVSTALIAGIVIIVIVIAA
VAAIIALRRR

Specific function: Unknown

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 89991; Mature: 89991

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIHKTYVLLIVASVMVLIALNIAYASSGYTIIYWNSYGTLTVPPGTPICNIWNPKALWS
CCEEHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCEEEECCCCCEECCCCHHHHHH
FINAWESLAYYNTYNGQWWPVLASNWTLFPQNDTIIIHLRRGLVWFNGSATMPFTAWDVY
HHHHHHHHHEEECCCCEEEEEEECCEEEECCCCEEEEEEECCEEEECCCCCCCEEHHHHH
AEFYIGVKAFDWWYPYVNADGIRVINNYTLSIQLTAWSPTTILFMLTEPITTPWPYWEPV
EEHEEEEEEEEEECCEECCCCEEEEEEEEEEEEEEECCCEEEEEEEECCCCCCCCCHHHH
VKALKTMNSTYALTVYGPNNVTTWNPPCWSLAPYYFVAFYPGTATFVTQLEPPNILRQWY
HHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHH
NIFPYEDWQYYPVIDYVQVLGNTQALTGLLSGKATWSSVALSLAQIGVVNKSGLLAYMVE
HCCCCCCCEECCHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHCEECCCCHHHHHHH
EFGELGMAINPLGGYPFNTTQFRKALCYAVNLTAAIAVWGIGTYYPSYYPAPVFPTTIDT
HHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCC
YPPSVKQFIIPCSYNTTKAAELLESIGMYKKGNQWYLPNGTPLTLTVITPSGFTDWATIT
CCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCEEECCCCCEEEEEEECCCCCCCHHHHH
EGWATQLSLFGIPTKVLALDTGTYWSSIFPSAQFEVANTLSSYGRGYYDPTGLAFQGPLE
CCHHHEEEEECCCEEEEEEECCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEECCHH
WIPWVTELGIYTWPFQWPNGTCTPVVIHLPPSANSSLVPANGTVVWCINSTLGYINLTNW
HCCHHHHCCCEEEEEECCCCCCCEEEEECCCCCCCCEECCCCEEEEEEECCCCEEEECCE
FTLYDAATPGTHQYNELLKVLFAWYDYYVPIVPVGWKRAEVNIGPKNYLITWAYNVPNPM
EEEEECCCCCCHHHHHHHHHHHHHHHHCEEEEECCCEEEEEEECCCCEEEEEEECCCCHH
CEKYIPPWLRIELMPSDNSYIIGAEAYYYQVISSPVWEAFWGSGAPAGAVPPLIEAMVNG
HHHHCCCEEEEEEEECCCCEEEECHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHCC
SLWIKHPDYAEFLGLTPSYLTDLNQLRYCLAQYFNITSEYVPSIITTSTTTTTTTTTTST
EEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCEEECCCCEEEEEEEECE
TTTSTTTTTPVTTSATTSTTTSTVTTTAVSTVVSTVTTTAVSTVTSTATTTAVSTVTVTK
EECCCEECCCEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEEEECH
PVVSTALIAGIVIIVIVIAAVAAIIALRRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRIHKTYVLLIVASVMVLIALNIAYASSGYTIIYWNSYGTLTVPPGTPICNIWNPKALWS
CCEEHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCEEEECCCCCEECCCCHHHHHH
FINAWESLAYYNTYNGQWWPVLASNWTLFPQNDTIIIHLRRGLVWFNGSATMPFTAWDVY
HHHHHHHHHEEECCCCEEEEEEECCEEEECCCCEEEEEEECCEEEECCCCCCCEEHHHHH
AEFYIGVKAFDWWYPYVNADGIRVINNYTLSIQLTAWSPTTILFMLTEPITTPWPYWEPV
EEHEEEEEEEEEECCEECCCCEEEEEEEEEEEEEEECCCEEEEEEEECCCCCCCCCHHHH
VKALKTMNSTYALTVYGPNNVTTWNPPCWSLAPYYFVAFYPGTATFVTQLEPPNILRQWY
HHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHH
NIFPYEDWQYYPVIDYVQVLGNTQALTGLLSGKATWSSVALSLAQIGVVNKSGLLAYMVE
HCCCCCCCEECCHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHCEECCCCHHHHHHH
EFGELGMAINPLGGYPFNTTQFRKALCYAVNLTAAIAVWGIGTYYPSYYPAPVFPTTIDT
HHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCC
YPPSVKQFIIPCSYNTTKAAELLESIGMYKKGNQWYLPNGTPLTLTVITPSGFTDWATIT
CCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCEEECCCCCEEEEEEECCCCCCCHHHHH
EGWATQLSLFGIPTKVLALDTGTYWSSIFPSAQFEVANTLSSYGRGYYDPTGLAFQGPLE
CCHHHEEEEECCCEEEEEEECCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEECCHH
WIPWVTELGIYTWPFQWPNGTCTPVVIHLPPSANSSLVPANGTVVWCINSTLGYINLTNW
HCCHHHHCCCEEEEEECCCCCCCEEEEECCCCCCCCEECCCCEEEEEEECCCCEEEECCE
FTLYDAATPGTHQYNELLKVLFAWYDYYVPIVPVGWKRAEVNIGPKNYLITWAYNVPNPM
EEEEECCCCCCHHHHHHHHHHHHHHHHCEEEEECCCEEEEEEECCCCEEEEEEECCCCHH
CEKYIPPWLRIELMPSDNSYIIGAEAYYYQVISSPVWEAFWGSGAPAGAVPPLIEAMVNG
HHHHCCCEEEEEEEECCCCEEEECHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHCC
SLWIKHPDYAEFLGLTPSYLTDLNQLRYCLAQYFNITSEYVPSIITTSTTTTTTTTTTST
EEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCEEECCCCEEEEEEEECE
TTTSTTTTTPVTTSATTSTTTSTVTTTAVSTVVSTVTTTAVSTVTSTATTTAVSTVTVTK
EECCCEECCCEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEEEECH
PVVSTALIAGIVIIVIVIAAVAAIIALRRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA