| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041209
Identifier: 159041209
GI number: 159041209
Start: 665543
End: 666109
Strand: Reverse
Name: 159041209
Synonym: Cmaq_0631
Alternate gene names: NA
Gene position: 666109-665543 (Counterclockwise)
Preceding gene: 159041210
Following gene: 159041205
Centisome position: 32.06
GC content: 44.09
Gene sequence:
>567_bases ATGGGGTTAGACTACAGGGGGTTAATTCACCAAGTTGATTCTATGATTAGGAGTAGTGTTCTAAGAAGCCTAGGCGACTT GGAAAGCAGTATGGAGGGTATCATTGAGTTAATCACGGAGGCTCTTAATGTTGAGAAGCCTAGGTTAATCGTTACCATTA ATAATATTAACGAATGCGGTAGATTCGACTCAGGTCCCTGCTCAAGCATACTTGGTATTTACATTGCCGGTGATTCAACA ATACTGGTTAATTATAAGGCTGATTTAGGTACAATGCTGCATCTCCTCTCCCACCATCTGCAAGCCTTAGAGAATGGTAA AGCCAGGTACATTCAAGTTAAGGAGACTGAGGAGGTTAGGTTACCGTGGGAAATTAGGCCGCTTGAGGCTAACGCAGTAA TTAGGGCTGCTTACCTAGCTAGAAGTATACCTCCTAAGGTATTTAAGGTTTGGAATGAGGAGGTTAGGCCCATGGCGAGA GAAGTTGATGAGAGCGTAAATAAGGCTAGGGCGCTCATTAGCCACTTAAGCAGGAGCATGGAGTTAATACTGGACAGGAG GCAATGA
Upstream 100 bases:
>100_bases ATAAACTGAATTAGAATCATTGCCTAGACTTCAATACTTAACCTATTATTGATACTAATATGAGTTAAGGTTTAATAAAA GGGGACGGATAATTGTATTA
Downstream 100 bases:
>100_bases GCAATCTACCTTATTTTAATTCAGAGCATTTAGCTAAATATGAGTGGTACTTAAGGCTTTATCTTTAAGCATGAATACAC TTGGTGAATCTAAAAAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MGLDYRGLIHQVDSMIRSSVLRSLGDLESSMEGIIELITEALNVEKPRLIVTINNINECGRFDSGPCSSILGIYIAGDST ILVNYKADLGTMLHLLSHHLQALENGKARYIQVKETEEVRLPWEIRPLEANAVIRAAYLARSIPPKVFKVWNEEVRPMAR EVDESVNKARALISHLSRSMELILDRRQ
Sequences:
>Translated_188_residues MGLDYRGLIHQVDSMIRSSVLRSLGDLESSMEGIIELITEALNVEKPRLIVTINNINECGRFDSGPCSSILGIYIAGDST ILVNYKADLGTMLHLLSHHLQALENGKARYIQVKETEEVRLPWEIRPLEANAVIRAAYLARSIPPKVFKVWNEEVRPMAR EVDESVNKARALISHLSRSMELILDRRQ >Mature_187_residues GLDYRGLIHQVDSMIRSSVLRSLGDLESSMEGIIELITEALNVEKPRLIVTINNINECGRFDSGPCSSILGIYIAGDSTI LVNYKADLGTMLHLLSHHLQALENGKARYIQVKETEEVRLPWEIRPLEANAVIRAAYLARSIPPKVFKVWNEEVRPMARE VDESVNKARALISHLSRSMELILDRRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21233; Mature: 21102
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLDYRGLIHQVDSMIRSSVLRSLGDLESSMEGIIELITEALNVEKPRLIVTINNINECG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHCC RFDSGPCSSILGIYIAGDSTILVNYKADLGTMLHLLSHHLQALENGKARYIQVKETEEVR CCCCCCHHHHHEEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEE LPWEIRPLEANAVIRAAYLARSIPPKVFKVWNEEVRPMAREVDESVNKARALISHLSRSM CCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELILDRRQ HHHHCCCC >Mature Secondary Structure GLDYRGLIHQVDSMIRSSVLRSLGDLESSMEGIIELITEALNVEKPRLIVTINNINECG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHCC RFDSGPCSSILGIYIAGDSTILVNYKADLGTMLHLLSHHLQALENGKARYIQVKETEEVR CCCCCCHHHHHEEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEE LPWEIRPLEANAVIRAAYLARSIPPKVFKVWNEEVRPMAREVDESVNKARALISHLSRSM CCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELILDRRQ HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA