| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041192
Identifier: 159041192
GI number: 159041192
Start: 646772
End: 647296
Strand: Reverse
Name: 159041192
Synonym: Cmaq_0613
Alternate gene names: NA
Gene position: 647296-646772 (Counterclockwise)
Preceding gene: 159041196
Following gene: 159041191
Centisome position: 31.16
GC content: 46.48
Gene sequence:
>525_bases ATGCAGGTGGCCATTGCAGCCCACAGTGGTGAATACAGGGATGAGCATGTTAAAGCCGTTAAGGATGTTATAGATGGCTT AACCCAATGTAAACCCACCATACTTCTAGGCGGCTACTGGGGATTAATGAGGGTTGTGGCTGATGAAGCCATCTCAAGGG GGTTAAGGGTCGTGTTAATACTGCCTATTGAGAACGAGAACATTGAGGCCCCTAAGGATGCTGTAATCGTGAGGACTGGT ATGGAGTTTAGGGAAAGGTCAGTGGTGTTAGTTAGGAGTAGTGATTCACTTATAGCTATTGGTGGGGCTGTTGGAACAAT AATGGAGGCGCTTTTAGCATACGCCATGGGTAAACCAACCATAGTGCTTAAGGGCACGGGTTTCCCAACGGATAGACTTG AGTTAGCCTTCCCAGATTACGTTGATGATAGGAGAACCTCCAGGATACTTTACGTAACTAATCCCCGTGAAGCCGGTAAG TTAGCTTGTATTTCAAGTGGAATTCAGGTTAAGGAACAGGGATGA
Upstream 100 bases:
>100_bases CATCTACTTATTCTTCTACCTTAATAAATCTGATGTTAAGAGGAGTGAATGATTTAGGAAATGAGGCAATACTTTATACC ACCCATTTACTTAACGCAGC
Downstream 100 bases:
>100_bases GGTTTCATCTAGGTATATAAAATGAACATAATACTGAATTAAAGGTCGTGTGAAAAACATTAAAAATAGTGAAACAGAGC CTAATTCATGAAGTTTGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MQVAIAAHSGEYRDEHVKAVKDVIDGLTQCKPTILLGGYWGLMRVVADEAISRGLRVVLILPIENENIEAPKDAVIVRTG MEFRERSVVLVRSSDSLIAIGGAVGTIMEALLAYAMGKPTIVLKGTGFPTDRLELAFPDYVDDRRTSRILYVTNPREAGK LACISSGIQVKEQG
Sequences:
>Translated_174_residues MQVAIAAHSGEYRDEHVKAVKDVIDGLTQCKPTILLGGYWGLMRVVADEAISRGLRVVLILPIENENIEAPKDAVIVRTG MEFRERSVVLVRSSDSLIAIGGAVGTIMEALLAYAMGKPTIVLKGTGFPTDRLELAFPDYVDDRRTSRILYVTNPREAGK LACISSGIQVKEQG >Mature_174_residues MQVAIAAHSGEYRDEHVKAVKDVIDGLTQCKPTILLGGYWGLMRVVADEAISRGLRVVLILPIENENIEAPKDAVIVRTG MEFRERSVVLVRSSDSLIAIGGAVGTIMEALLAYAMGKPTIVLKGTGFPTDRLELAFPDYVDDRRTSRILYVTNPREAGK LACISSGIQVKEQG
Specific function: Unknown
COG id: COG1611
COG function: function code R; Predicted Rossmann fold nucleotide-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18925; Mature: 18925
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVAIAAHSGEYRDEHVKAVKDVIDGLTQCKPTILLGGYWGLMRVVADEAISRGLRVVLI CEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHCCCEEEEE LPIENENIEAPKDAVIVRTGMEFRERSVVLVRSSDSLIAIGGAVGTIMEALLAYAMGKPT EEECCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCEEEECCHHHHHHHHHHHHHCCCCE IVLKGTGFPTDRLELAFPDYVDDRRTSRILYVTNPREAGKLACISSGIQVKEQG EEEEECCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEECCEEEEECC >Mature Secondary Structure MQVAIAAHSGEYRDEHVKAVKDVIDGLTQCKPTILLGGYWGLMRVVADEAISRGLRVVLI CEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHCCCEEEEE LPIENENIEAPKDAVIVRTGMEFRERSVVLVRSSDSLIAIGGAVGTIMEALLAYAMGKPT EEECCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCEEEECCHHHHHHHHHHHHHCCCCE IVLKGTGFPTDRLELAFPDYVDDRRTSRILYVTNPREAGKLACISSGIQVKEQG EEEEECCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEECCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA