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The map label for this gene is sseA [C]

Identifier: 159041170

GI number: 159041170

Start: 621326

End: 622213

Strand: Reverse

Name: sseA [C]

Synonym: Cmaq_0591

Alternate gene names: 159041170

Gene position: 622213-621326 (Counterclockwise)

Preceding gene: 159041172

Following gene: 159041163

Centisome position: 29.95

GC content: 48.09

Gene sequence:

>888_bases
ATGAGCTATGCGCATCCCGAGGTGCTTGTGGATACTGAGTGGATGAGGAAGCACTTAAATGACCCAAAGGTTAGAGTTGT
GGAGGTTGACTATGATCCGAACACCGCATACTTTGCATGGCACTTGCCGGGTGCTGCATTATTGACATGGAAGGATCATA
TTAGGCATCCAGTGAGAAGGGATTTCGTTGAACCTGATCAATTCGCAAAGTACATGGAGGAGAGGGGCATATCTAATGAT
ACTACTGTTATACTTTACGGTGACTATAATAACTGGTTCGCAGCCTACGCCTTCTGGCTCTTCAAGGTTTATGGACATGA
GGACGTTAGGTTACTGAATGGTGGGCGTACCAAGTGGGCTAAGGAGAATGGGCCCACATGCAGTGGTCACCAGGAGCCGC
ATTATTACAAGGATGTTGGGGCCAGGTACACGGTTAAGAAGGTTGACTGGGGTGGACATAGGGTTTACCTATGGGAGATA
TTGAATAGACTCAACAAGGGTGAGATTGGTAAAAGTCTAGCGCTTGTCGATGTTAGGTCGCCTAGAGAGTACACTGGTGA
GATAACGGCACCACCAGAATACCCTAATGAGCATGCTCAGGTGGGTGGGCACATACCAGGTGCCATCAATATTCCCTGGA
GCCTAGCCGTGAACCCAGACACTGGTGAGTTTAAACCCGTTGAGGAATTAAGGAGACTTTACAGCCAGTATGGAATAACA
CCAGATAAGGAGGTAATAACCTACTGCAGGATTGCGGAAAGAGCCTCCCACACATGGTTCGTACTCAAGTACCTACTTGG
TTACCCAGCTGTTAGGGTTTATGACGGCTCTTGGGCCGAGTGGGGTAATGCTGTTGGTGCACCAGTTAAGAAGGGTAATG
AACCTTAA

Upstream 100 bases:

>100_bases
GCGTGTTTTAAAATATTTTTTATACATGAAATTTCTGCAATCTCGTGTATAATATGCTTTTTACAAGACGTTTATTAAAA
TCTATTAGCTTAGGCTAATT

Downstream 100 bases:

>100_bases
ATTAAGGTACCTTAAAACCAAATTAATCATTTTCCCTTCCCCTTCTCAAATCTATTTAGTTATATTTAACCTTTACCTTA
CTGAACATGTTCCACCTACC

Product: rhodanese domain-containing protein

Products: NA

Alternate protein names: Rhodanese-like protein [H]

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MSYAHPEVLVDTEWMRKHLNDPKVRVVEVDYDPNTAYFAWHLPGAALLTWKDHIRHPVRRDFVEPDQFAKYMEERGISND
TTVILYGDYNNWFAAYAFWLFKVYGHEDVRLLNGGRTKWAKENGPTCSGHQEPHYYKDVGARYTVKKVDWGGHRVYLWEI
LNRLNKGEIGKSLALVDVRSPREYTGEITAPPEYPNEHAQVGGHIPGAINIPWSLAVNPDTGEFKPVEELRRLYSQYGIT
PDKEVITYCRIAERASHTWFVLKYLLGYPAVRVYDGSWAEWGNAVGAPVKKGNEP

Sequences:

>Translated_295_residues
MSYAHPEVLVDTEWMRKHLNDPKVRVVEVDYDPNTAYFAWHLPGAALLTWKDHIRHPVRRDFVEPDQFAKYMEERGISND
TTVILYGDYNNWFAAYAFWLFKVYGHEDVRLLNGGRTKWAKENGPTCSGHQEPHYYKDVGARYTVKKVDWGGHRVYLWEI
LNRLNKGEIGKSLALVDVRSPREYTGEITAPPEYPNEHAQVGGHIPGAINIPWSLAVNPDTGEFKPVEELRRLYSQYGIT
PDKEVITYCRIAERASHTWFVLKYLLGYPAVRVYDGSWAEWGNAVGAPVKKGNEP
>Mature_294_residues
SYAHPEVLVDTEWMRKHLNDPKVRVVEVDYDPNTAYFAWHLPGAALLTWKDHIRHPVRRDFVEPDQFAKYMEERGISNDT
TVILYGDYNNWFAAYAFWLFKVYGHEDVRLLNGGRTKWAKENGPTCSGHQEPHYYKDVGARYTVKKVDWGGHRVYLWEIL
NRLNKGEIGKSLALVDVRSPREYTGEITAPPEYPNEHAQVGGHIPGAINIPWSLAVNPDTGEFKPVEELRRLYSQYGITP
DKEVITYCRIAERASHTWFVLKYLLGYPAVRVYDGSWAEWGNAVGAPVKKGNEP

Specific function: May be a sulfotransferase involved in the formation of thiosulfate [H]

COG id: COG2897

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 rhodanese domains [H]

Homologues:

Organism=Homo sapiens, GI17402865, Length=290, Percent_Identity=32.0689655172414, Blast_Score=117, Evalue=9e-27,
Organism=Homo sapiens, GI61835204, Length=289, Percent_Identity=26.2975778546713, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI194473681, Length=289, Percent_Identity=26.2975778546713, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI194473668, Length=289, Percent_Identity=26.2975778546713, Blast_Score=94, Evalue=2e-19,
Organism=Escherichia coli, GI87082121, Length=293, Percent_Identity=27.3037542662116, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI87081967, Length=304, Percent_Identity=26.9736842105263, Blast_Score=79, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI71997283, Length=306, Percent_Identity=25.1633986928105, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17561888, Length=284, Percent_Identity=26.4084507042254, Blast_Score=87, Evalue=9e-18,
Organism=Saccharomyces cerevisiae, GI6324825, Length=225, Percent_Identity=24, Blast_Score=66, Evalue=7e-12,

Paralogues:

None

Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763
- InterPro:   IPR001307 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: =2.8.1.1 [H]

Molecular weight: Translated: 33995; Mature: 33863

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS00380 RHODANESE_1 ; PS00683 RHODANESE_2 ; PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYAHPEVLVDTEWMRKHLNDPKVRVVEVDYDPNTAYFAWHLPGAALLTWKDHIRHPVRR
CCCCCCCEEEEHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCEEEEEHHHHCCHHHH
DFVEPDQFAKYMEERGISNDTTVILYGDYNNWFAAYAFWLFKVYGHEDVRLLNGGRTKWA
CCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC
KENGPTCSGHQEPHYYKDVGARYTVKKVDWGGHRVYLWEILNRLNKGEIGKSLALVDVRS
CCCCCCCCCCCCCCHHHHCCCEEEEEEECCCCCEEEHHHHHHHCCCCCCCCEEEEEECCC
PREYTGEITAPPEYPNEHAQVGGHIPGAINIPWSLAVNPDTGEFKPVEELRRLYSQYGIT
CHHHCCCEECCCCCCCCHHHCCCCCCCEEECCEEEEECCCCCCCCCHHHHHHHHHHHCCC
PDKEVITYCRIAERASHTWFVLKYLLGYPAVRVYDGSWAEWGNAVGAPVKKGNEP
CCHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SYAHPEVLVDTEWMRKHLNDPKVRVVEVDYDPNTAYFAWHLPGAALLTWKDHIRHPVRR
CCCCCCEEEEHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCEEEEEHHHHCCHHHH
DFVEPDQFAKYMEERGISNDTTVILYGDYNNWFAAYAFWLFKVYGHEDVRLLNGGRTKWA
CCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC
KENGPTCSGHQEPHYYKDVGARYTVKKVDWGGHRVYLWEILNRLNKGEIGKSLALVDVRS
CCCCCCCCCCCCCCHHHHCCCEEEEEEECCCCCEEEHHHHHHHCCCCCCCCEEEEEECCC
PREYTGEITAPPEYPNEHAQVGGHIPGAINIPWSLAVNPDTGEFKPVEELRRLYSQYGIT
CHHHCCCEECCCCCCCCHHHCCCCCCCEEECCEEEEECCCCCCCCCHHHHHHHHHHHCCC
PDKEVITYCRIAERASHTWFVLKYLLGYPAVRVYDGSWAEWGNAVGAPVKKGNEP
CCHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA