| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041131
Identifier: 159041131
GI number: 159041131
Start: 582128
End: 583108
Strand: Reverse
Name: 159041131
Synonym: Cmaq_0550
Alternate gene names: NA
Gene position: 583108-582128 (Counterclockwise)
Preceding gene: 159041132
Following gene: 159041129
Centisome position: 28.07
GC content: 42.2
Gene sequence:
>981_bases GTGATTAATGATGAATGGTCTGTGAATGGGTTGAGGGTGATTAAGATTAGTAGGAATGAACTTGAGGTCACTGTTATCCC TGAACTCGGTGGCTTAATTTGGAGCATTAGGTACAATGGTAATGAGCTGCTTCACCATCATAAGGATCCTGAACCCATTG AGTATTTTAGAGAAGGCCTAACACCAGAGGACTTCTATAATGTAGTCTTCTTCGGTGGTTGGTTTGAGGTGATTCCCAAC GCCGGCTATGCCTCAAAGTACGCTGGCGTATTCTTTGGTCTACATGATGAGACTCCTTACTTACCATGGAGGGTTGAGTA TGATGAGGAGGTTGACGAGTACTCAATGCTCATGATTGTGACCTTGAGGAAGTATCCGCTTAAACTGTATAGGCGAATTA GGTTAATTAACAGTAATGAGGTTTTAGTTAAGGAGAGGTTAATTAACTTAAGTGGACAGAATTTAAAATTCTCATGGCTG CATCACCCAAACTTCGGCGGTGACTTACTGAGCGAATGCACTACACTTGAGTTACCTGAGGGTACTGAGGTTGAGGTTGA TAAGTACCTTAACGGTGATTCATCAATACTTGAACCTGGTTACAGGGGCTTCTTCCCAATGGTTAAATCTAAGGATGGGG GGATGATTGATTTATCAAGGTTCCCAAGGGGTATTAACACTAATGACTTAGTTTATGTGCCTAATGTTAATGGTAATTGG TTTAGGTTAATTAATGAGGATTTAGGTATTACCCTTGAGGCTAATTGGGATTCATCAGTGTTCAGGTCAATGTGGCTTTG GAGACCACTGGGTGGTGGATTAAATTACCCGTGGTTCAGTAGGATTTACGCAGCTTCAATTGAATTAGCCACCAGTTGGC CAGCCACTGGACTGGCTGGACAGGTTAAGGCTGGGACGGCCTATGAGATTCAGGGTAATGGTGAATTAAACACTTGGATT AGATTTAAGATAACCTCTTAA
Upstream 100 bases:
>100_bases AAGCATGTAGAGTTAAATTCATTAGGTTTATAGTTATTCTCCAAGGTATTGAATAAATAGTTATAAAATATAGTGTATTG AATTAAACTTAGGGATCCGT
Downstream 100 bases:
>100_bases CCTCCTTAGGGTTAACCTTAACGATTATTGCATTGAAGGGGCAGTTGTATTGGCATGAGAAGCAACCCATGCATTGCTCC TCTGAGGCAACCACAGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MINDEWSVNGLRVIKISRNELEVTVIPELGGLIWSIRYNGNELLHHHKDPEPIEYFREGLTPEDFYNVVFFGGWFEVIPN AGYASKYAGVFFGLHDETPYLPWRVEYDEEVDEYSMLMIVTLRKYPLKLYRRIRLINSNEVLVKERLINLSGQNLKFSWL HHPNFGGDLLSECTTLELPEGTEVEVDKYLNGDSSILEPGYRGFFPMVKSKDGGMIDLSRFPRGINTNDLVYVPNVNGNW FRLINEDLGITLEANWDSSVFRSMWLWRPLGGGLNYPWFSRIYAASIELATSWPATGLAGQVKAGTAYEIQGNGELNTWI RFKITS
Sequences:
>Translated_326_residues MINDEWSVNGLRVIKISRNELEVTVIPELGGLIWSIRYNGNELLHHHKDPEPIEYFREGLTPEDFYNVVFFGGWFEVIPN AGYASKYAGVFFGLHDETPYLPWRVEYDEEVDEYSMLMIVTLRKYPLKLYRRIRLINSNEVLVKERLINLSGQNLKFSWL HHPNFGGDLLSECTTLELPEGTEVEVDKYLNGDSSILEPGYRGFFPMVKSKDGGMIDLSRFPRGINTNDLVYVPNVNGNW FRLINEDLGITLEANWDSSVFRSMWLWRPLGGGLNYPWFSRIYAASIELATSWPATGLAGQVKAGTAYEIQGNGELNTWI RFKITS >Mature_326_residues MINDEWSVNGLRVIKISRNELEVTVIPELGGLIWSIRYNGNELLHHHKDPEPIEYFREGLTPEDFYNVVFFGGWFEVIPN AGYASKYAGVFFGLHDETPYLPWRVEYDEEVDEYSMLMIVTLRKYPLKLYRRIRLINSNEVLVKERLINLSGQNLKFSWL HHPNFGGDLLSECTTLELPEGTEVEVDKYLNGDSSILEPGYRGFFPMVKSKDGGMIDLSRFPRGINTNDLVYVPNVNGNW FRLINEDLGITLEANWDSSVFRSMWLWRPLGGGLNYPWFSRIYAASIELATSWPATGLAGQVKAGTAYEIQGNGELNTWI RFKITS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37463; Mature: 37463
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINDEWSVNGLRVIKISRNELEVTVIPELGGLIWSIRYNGNELLHHHKDPEPIEYFREGL CCCCCCCCCCEEEEEEECCEEEEEEEECCCCEEEEEEECCCHHHHCCCCCCHHHHHHCCC TPEDFYNVVFFGGWFEVIPNAGYASKYAGVFFGLHDETPYLPWRVEYDEEVDEYSMLMIV CCCHHEEEEEECCCCEECCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCHHEEEEEE TLRKYPLKLYRRIRLINSNEVLVKERLINLSGQNLKFSWLHHPNFGGDLLSECTTLELPE EHHHHHHHHHHEEEEECCCCEEEEEHHHCCCCCCEEEEEEECCCCCHHHHHCCEEEECCC GTEVEVDKYLNGDSSILEPGYRGFFPMVKSKDGGMIDLSRFPRGINTNDLVYVPNVNGNW CCCEEEHEECCCCCHHCCCCCCCCCCEEECCCCCEEEHHHCCCCCCCCCEEEEECCCCCE FRLINEDLGITLEANWDSSVFRSMWLWRPLGGGLNYPWFSRIYAASIELATSWPATGLAG EEEEECCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHEEEEEEEEECCCCCCCCC QVKAGTAYEIQGNGELNTWIRFKITS EECCCEEEEEECCCCEEEEEEEEECC >Mature Secondary Structure MINDEWSVNGLRVIKISRNELEVTVIPELGGLIWSIRYNGNELLHHHKDPEPIEYFREGL CCCCCCCCCCEEEEEEECCEEEEEEEECCCCEEEEEEECCCHHHHCCCCCCHHHHHHCCC TPEDFYNVVFFGGWFEVIPNAGYASKYAGVFFGLHDETPYLPWRVEYDEEVDEYSMLMIV CCCHHEEEEEECCCCEECCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCHHEEEEEE TLRKYPLKLYRRIRLINSNEVLVKERLINLSGQNLKFSWLHHPNFGGDLLSECTTLELPE EHHHHHHHHHHEEEEECCCCEEEEEHHHCCCCCCEEEEEEECCCCCHHHHHCCEEEECCC GTEVEVDKYLNGDSSILEPGYRGFFPMVKSKDGGMIDLSRFPRGINTNDLVYVPNVNGNW CCCEEEHEECCCCCHHCCCCCCCCCCEEECCCCCEEEHHHCCCCCCCCCEEEEECCCCCE FRLINEDLGITLEANWDSSVFRSMWLWRPLGGGLNYPWFSRIYAASIELATSWPATGLAG EEEEECCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHEEEEEEEEECCCCCCCCC QVKAGTAYEIQGNGELNTWIRFKITS EECCCEEEEEECCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA