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The map label for this gene is ef1b

Identifier: 159041124

GI number: 159041124

Start: 576443

End: 576718

Strand: Reverse

Name: ef1b

Synonym: Cmaq_0542

Alternate gene names: 159041124

Gene position: 576718-576443 (Counterclockwise)

Preceding gene: 159041125

Following gene: 159041123

Centisome position: 27.76

GC content: 44.57

Gene sequence:

>276_bases
ATGGCTCAAATATACTACGTGTACAGGGTTACCCCAAGTAGGGAGGATGTTGACTACGAGAAGCTTAAGCAGGTTATTAA
GGGTAAGCTTGAGCCGAAGTACCCTGTTAAGGGTATTGAGGAGGAGGAGATTGGTTTCGGTATTAAGGCCTTGAAAATAC
ACATAGTTACGCCTGAGTCCGATGAGTACACTAGTGATGAGATTGAGAACATACTATCCCAGATAGAGGACATTGGAGGC
ATTGAGCTCGAGTACTTCACCAGGGTTAGCTTCTAA

Upstream 100 bases:

>100_bases
AGGCTTTCAGCTGTAAATAGGCTGAAATGTGGCTCCTGTTTTAATTAACTGGTACAGTAAATTTTATATAATGCGTATTT
TAGGGGACATGGTGAATTAA

Downstream 100 bases:

>100_bases
AAACACAACCAGCCCTAGCCTTGGATTAGCCTTTGCAGCCTCATGCCTAAGGTTGCGGGGCATTAAAAGTTTTATAAACC
CATAGTTTAATTCTCACCTA

Product: translation elongation factor EF1B, beta and delta chains, guanine nucleotide exchange

Products: NA

Alternate protein names: EF-1-beta; aEF-1beta

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MAQIYYVYRVTPSREDVDYEKLKQVIKGKLEPKYPVKGIEEEEIGFGIKALKIHIVTPESDEYTSDEIENILSQIEDIGG
IELEYFTRVSF

Sequences:

>Translated_91_residues
MAQIYYVYRVTPSREDVDYEKLKQVIKGKLEPKYPVKGIEEEEIGFGIKALKIHIVTPESDEYTSDEIENILSQIEDIGG
IELEYFTRVSF
>Mature_90_residues
AQIYYVYRVTPSREDVDYEKLKQVIKGKLEPKYPVKGIEEEEIGFGIKALKIHIVTPESDEYTSDEIENILSQIEDIGGI
ELEYFTRVSF

Specific function: Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA

COG id: COG2092

COG function: function code J; Translation elongation factor EF-1beta

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-1-beta/EF-1-delta family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): EF1B_CALMQ (A8MC80)

Other databases:

- EMBL:   CP000852
- RefSeq:   YP_001540376.1
- ProteinModelPortal:   A8MC80
- SMR:   A8MC80
- GeneID:   5710309
- GenomeReviews:   CP000852_GR
- KEGG:   cma:Cmaq_0542
- HOGENOM:   HBG541037
- OMA:   EIGFGIK
- ProtClustDB:   CLSK899534
- BioCyc:   CMAQ397948:CMAQ_0542-MONOMER
- HAMAP:   MF_00043
- InterPro:   IPR014717
- InterPro:   IPR004542
- InterPro:   IPR014038
- Gene3D:   G3DSA:3.30.70.60
- SMART:   SM00888

Pfam domain/function: PF00736 EF1_GNE; SSF54984 Transl_elong_EF1B_B/D_G_exch

EC number: NA

Molecular weight: Translated: 10576; Mature: 10445

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQIYYVYRVTPSREDVDYEKLKQVIKGKLEPKYPVKGIEEEEIGFGIKALKIHIVTPES
CCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCC
DEYTSDEIENILSQIEDIGGIELEYFTRVSF
CCCCHHHHHHHHHHHHHCCCCEEEEEEEECC
>Mature Secondary Structure 
AQIYYVYRVTPSREDVDYEKLKQVIKGKLEPKYPVKGIEEEEIGFGIKALKIHIVTPES
CEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCC
DEYTSDEIENILSQIEDIGGIELEYFTRVSF
CCCCHHHHHHHHHHHHHCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA