| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is folE
Identifier: 159041104
GI number: 159041104
Start: 554271
End: 554837
Strand: Reverse
Name: folE
Synonym: Cmaq_0521
Alternate gene names: 159041104
Gene position: 554837-554271 (Counterclockwise)
Preceding gene: 159041105
Following gene: 159041103
Centisome position: 26.71
GC content: 45.5
Gene sequence:
>567_bases ATGGGTGTTAATAAGGCCTTGATTAAGCAGGCAGTTAAGCAGATACTTGTAGCCATTGGTGAGGACCCTGAGAGAGAGGG GTTGAGGAGGACGCCTGATAGGGTTGCCAACATGCTTGAGGAGTTGACTAACGGCCGTGAGGAAAATGTCCAGTACACTC TCTTTGAGGGGTCTAGTAACATGGTTATTGTGGCTGGTATAAGGTTCTCAACACTCTGTGAGCATCACCTACTGCCAATG CTTGGGGTGACTCACGTAGCATACATACCTAGTGATAAGGTTATTGGAGTGAGTAAAATACCTAGAATAGTGGTTAAGTA CTCCAGGATGCTTCAACTACAGGAGAGGTTGACTAGGCAGATAATGAATGAGGTTTCCTCAGCCACAGGTTCTGGGGATG TCATGGTTCTCACCGAGGCATACCATACCTGCATGATGATTAGAGGTGTTAGGAGTGCATCACCCCTTGTTTCAATGGCC TATAAGGGTAAGTTCAATGATTCCTCACTTAGACTAGAGTTCCTGGAGTACATTAGGCCATTTAGGCTTAATAAATTCCT CACATGA
Upstream 100 bases:
>100_bases AGGCTAAGAGGAGGGAATTACTTAAACTCGCTGAGCAGTAATAGATTGAAATTCATTTGCTGGTGAGTTTTTTAAAGAAA TACTGTGAAGGCTTGATTCT
Downstream 100 bases:
>100_bases GTAATCTAATTCACCTATTTCAATCGAGTAAGGTATTTTAATAACCCGCATGAGTGTTAGACGTATGATTAACGAGTACC TGAAGCTAATGAAACCCCAC
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MGVNKALIKQAVKQILVAIGEDPEREGLRRTPDRVANMLEELTNGREENVQYTLFEGSSNMVIVAGIRFSTLCEHHLLPM LGVTHVAYIPSDKVIGVSKIPRIVVKYSRMLQLQERLTRQIMNEVSSATGSGDVMVLTEAYHTCMMIRGVRSASPLVSMA YKGKFNDSSLRLEFLEYIRPFRLNKFLT
Sequences:
>Translated_188_residues MGVNKALIKQAVKQILVAIGEDPEREGLRRTPDRVANMLEELTNGREENVQYTLFEGSSNMVIVAGIRFSTLCEHHLLPM LGVTHVAYIPSDKVIGVSKIPRIVVKYSRMLQLQERLTRQIMNEVSSATGSGDVMVLTEAYHTCMMIRGVRSASPLVSMA YKGKFNDSSLRLEFLEYIRPFRLNKFLT >Mature_187_residues GVNKALIKQAVKQILVAIGEDPEREGLRRTPDRVANMLEELTNGREENVQYTLFEGSSNMVIVAGIRFSTLCEHHLLPML GVTHVAYIPSDKVIGVSKIPRIVVKYSRMLQLQERLTRQIMNEVSSATGSGDVMVLTEAYHTCMMIRGVRSASPLVSMAY KGKFNDSSLRLEFLEYIRPFRLNKFLT
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family
Homologues:
Organism=Homo sapiens, GI66932968, Length=176, Percent_Identity=42.0454545454545, Blast_Score=130, Evalue=6e-31, Organism=Homo sapiens, GI4503949, Length=176, Percent_Identity=42.0454545454545, Blast_Score=130, Evalue=6e-31, Organism=Homo sapiens, GI66932970, Length=156, Percent_Identity=39.7435897435897, Blast_Score=113, Evalue=9e-26, Organism=Homo sapiens, GI66932972, Length=135, Percent_Identity=42.2222222222222, Blast_Score=109, Evalue=2e-24, Organism=Escherichia coli, GI1788476, Length=183, Percent_Identity=36.0655737704918, Blast_Score=98, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17560486, Length=175, Percent_Identity=41.1428571428571, Blast_Score=128, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6321706, Length=175, Percent_Identity=42.2857142857143, Blast_Score=128, Evalue=6e-31, Organism=Drosophila melanogaster, GI24656782, Length=171, Percent_Identity=38.5964912280702, Blast_Score=114, Evalue=4e-26, Organism=Drosophila melanogaster, GI24656796, Length=171, Percent_Identity=38.5964912280702, Blast_Score=114, Evalue=4e-26, Organism=Drosophila melanogaster, GI24656791, Length=171, Percent_Identity=38.5964912280702, Blast_Score=114, Evalue=5e-26,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): GCH1_CALMQ (A8MC60)
Other databases:
- EMBL: CP000852 - RefSeq: YP_001540356.1 - ProteinModelPortal: A8MC60 - SMR: A8MC60 - GeneID: 5709170 - GenomeReviews: CP000852_GR - KEGG: cma:Cmaq_0521 - HOGENOM: HBG370191 - OMA: MYVEEIF - ProtClustDB: CLSK964527 - BioCyc: CMAQ397948:CMAQ_0521-MONOMER - GO: GO:0005737 - HAMAP: MF_00223 - InterPro: IPR001474 - InterPro: IPR020602
Pfam domain/function: PF01227 GTP_cyclohydroI
EC number: =3.5.4.16
Molecular weight: Translated: 21219; Mature: 21088
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVNKALIKQAVKQILVAIGEDPEREGLRRTPDRVANMLEELTNGREENVQYTLFEGSSN CCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCC MVIVAGIRFSTLCEHHLLPMLGVTHVAYIPSDKVIGVSKIPRIVVKYSRMLQLQERLTRQ EEEEECCHHHHHHHHHHHHHHHHHHHEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHH IMNEVSSATGSGDVMVLTEAYHTCMMIRGVRSASPLVSMAYKGKFNDSSLRLEFLEYIRP HHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHH FRLNKFLT HHHHHCCC >Mature Secondary Structure GVNKALIKQAVKQILVAIGEDPEREGLRRTPDRVANMLEELTNGREENVQYTLFEGSSN CCCHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCC MVIVAGIRFSTLCEHHLLPMLGVTHVAYIPSDKVIGVSKIPRIVVKYSRMLQLQERLTRQ EEEEECCHHHHHHHHHHHHHHHHHHHEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHH IMNEVSSATGSGDVMVLTEAYHTCMMIRGVRSASPLVSMAYKGKFNDSSLRLEFLEYIRP HHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHH FRLNKFLT HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA