Click here to switch to the map view.

The map label for this gene is 159041066

Identifier: 159041066

GI number: 159041066

Start: 521066

End: 521926

Strand: Reverse

Name: 159041066

Synonym: Cmaq_0483

Alternate gene names: NA

Gene position: 521926-521066 (Counterclockwise)

Preceding gene: 159041073

Following gene: 159041063

Centisome position: 25.12

GC content: 47.74

Gene sequence:

>861_bases
ATGACAATACCTAGGGTTAGGTCCTATATACCGGGCCTTGATGAAGTGCTTTACGGTGGTGTTCCGGAGAGGAGTGTTGT
ACTTATTTCAGGTGGCCCTGGTACAGGTAAGTCCATTCTAGGTAAGCAATTCCTATTCAATGGGTTAACTAGGGGTGAGG
GGGCTGTTTTCGTTACCCTTGAGGAGCATCCTGTGGCTGTTAGGAGGAGTTTTAGGCATTTTAACTGGGATGTATCTAAG
TTTGAGAGGGAGGGTAAGTTCGCTATCATTGACGCCTTCACTACGGGTATTGGTTCAGCGTCCCAGAGGGAGAGGTATGT
GGTTAAGGATATTGATAACGTCCATGAGTTAATCGACGTACTTAGGCAAGCCATAAAGGATACAGGGGCCAGGAGGATAA
CAGTTGACTCAGTGAGTACACTCTACCTAACTAAGCCGTCAATAGCCAGGTCAACTGTGATGCTTCTTAAGAGGGTTATC
GCCGGCTTAGGTACTACGGCGTTCTTCATAAGCCAGGTATCAGTTGGGGAGAGGGGCTTCGGTGGACCTGGTGTTGAGCA
TGCTGTTGACGGTATAATTAGACTTGACTTAGATGAGGTTGATGGTAAACTCTACAGGTCGCTTATAGTTTGGAAAATGA
GGGACACTAAGATATCCATGGTTAGGCACCCAATGGACATAACTGATGAAGGCATTGTGGTTCACTGGGATAAGTACCTT
AAGTTAACCGCAACCTCAGCGGAGACTCAACCATTAAGTAAGGAGGAGGTTGAGGAGATGAGGAGGGCTGTGGAGGAGGC
TGAGAAGGCCAGTAAGGAGGTTAAGCCAACCCGCGGTGTTGAGGAGGAAGAGGAGGATTAA

Upstream 100 bases:

>100_bases
CCCCTAAAACACCCTCACTTATTCGGTGACGGGGTTGTTCATCACTTATTGCTGTTTAATGTTGTTAAGTTTTTAAGGAT
TTTAGTTTACTCTTTAAGTA

Downstream 100 bases:

>100_bases
GACCTGCTTAGTTTTTAATTAAAAATAAAAATAACTAATCCCCATCATGAACTTAATTCGCTTAAGGCTTCATTAAGAAG
ACTCCTAACCCTCTCCACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MTIPRVRSYIPGLDEVLYGGVPERSVVLISGGPGTGKSILGKQFLFNGLTRGEGAVFVTLEEHPVAVRRSFRHFNWDVSK
FEREGKFAIIDAFTTGIGSASQRERYVVKDIDNVHELIDVLRQAIKDTGARRITVDSVSTLYLTKPSIARSTVMLLKRVI
AGLGTTAFFISQVSVGERGFGGPGVEHAVDGIIRLDLDEVDGKLYRSLIVWKMRDTKISMVRHPMDITDEGIVVHWDKYL
KLTATSAETQPLSKEEVEEMRRAVEEAEKASKEVKPTRGVEEEEED

Sequences:

>Translated_286_residues
MTIPRVRSYIPGLDEVLYGGVPERSVVLISGGPGTGKSILGKQFLFNGLTRGEGAVFVTLEEHPVAVRRSFRHFNWDVSK
FEREGKFAIIDAFTTGIGSASQRERYVVKDIDNVHELIDVLRQAIKDTGARRITVDSVSTLYLTKPSIARSTVMLLKRVI
AGLGTTAFFISQVSVGERGFGGPGVEHAVDGIIRLDLDEVDGKLYRSLIVWKMRDTKISMVRHPMDITDEGIVVHWDKYL
KLTATSAETQPLSKEEVEEMRRAVEEAEKASKEVKPTRGVEEEEED
>Mature_285_residues
TIPRVRSYIPGLDEVLYGGVPERSVVLISGGPGTGKSILGKQFLFNGLTRGEGAVFVTLEEHPVAVRRSFRHFNWDVSKF
EREGKFAIIDAFTTGIGSASQRERYVVKDIDNVHELIDVLRQAIKDTGARRITVDSVSTLYLTKPSIARSTVMLLKRVIA
GLGTTAFFISQVSVGERGFGGPGVEHAVDGIIRLDLDEVDGKLYRSLIVWKMRDTKISMVRHPMDITDEGIVVHWDKYLK
LTATSAETQPLSKEEVEEMRRAVEEAEKASKEVKPTRGVEEEEED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 kaiC domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014774
- InterPro:   IPR004504
- InterPro:   IPR010624
- InterPro:   IPR022475 [H]

Pfam domain/function: PF06745 KaiC [H]

EC number: NA

Molecular weight: Translated: 31862; Mature: 31731

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: PS51146 KAIC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIPRVRSYIPGLDEVLYGGVPERSVVLISGGPGTGKSILGKQFLFNGLTRGEGAVFVTL
CCCCHHHHHCCCHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEE
EEHPVAVRRSFRHFNWDVSKFEREGKFAIIDAFTTGIGSASQRERYVVKDIDNVHELIDV
CCCCHHHHHHHHHCCCCHHHHHCCCCEEEEEEHHCCCCCCHHHCHHHHHHHHHHHHHHHH
LRQAIKDTGARRITVDSVSTLYLTKPSIARSTVMLLKRVIAGLGTTAFFISQVSVGERGF
HHHHHHHCCCCEEEECCCEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC
GGPGVEHAVDGIIRLDLDEVDGKLYRSLIVWKMRDTKISMVRHPMDITDEGIVVHWDKYL
CCCCHHHHHCCEEEECHHHHHHHHHHHHHHEEECCCCHHHHHCCCCCCCCCEEEEEECEE
KLTATSAETQPLSKEEVEEMRRAVEEAEKASKEVKPTRGVEEEEED
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TIPRVRSYIPGLDEVLYGGVPERSVVLISGGPGTGKSILGKQFLFNGLTRGEGAVFVTL
CCCHHHHHCCCHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEE
EEHPVAVRRSFRHFNWDVSKFEREGKFAIIDAFTTGIGSASQRERYVVKDIDNVHELIDV
CCCCHHHHHHHHHCCCCHHHHHCCCCEEEEEEHHCCCCCCHHHCHHHHHHHHHHHHHHHH
LRQAIKDTGARRITVDSVSTLYLTKPSIARSTVMLLKRVIAGLGTTAFFISQVSVGERGF
HHHHHHHCCCCEEEECCCEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC
GGPGVEHAVDGIIRLDLDEVDGKLYRSLIVWKMRDTKISMVRHPMDITDEGIVVHWDKYL
CCCCHHHHHCCEEEECHHHHHHHHHHHHHHEEECCCCHHHHHCCCCCCCCCEEEEEECEE
KLTATSAETQPLSKEEVEEMRRAVEEAEKASKEVKPTRGVEEEEED
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792869 [H]