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The map label for this gene is 159041057

Identifier: 159041057

GI number: 159041057

Start: 513349

End: 514218

Strand: Reverse

Name: 159041057

Synonym: Cmaq_0474

Alternate gene names: NA

Gene position: 514218-513349 (Counterclockwise)

Preceding gene: 159041058

Following gene: 159041056

Centisome position: 24.75

GC content: 46.09

Gene sequence:

>870_bases
ATGAGTAAGGCATTACCAATAGCTGATAACCACACCCACGTTAACCCGGTTAAGGGTCTTGGACCAAGGGAAGTGGCTAG
GAGGTTTAAGAGAACTGGGGGTTGGTTCATGGGTGTTGTAGCCCTATTAACCTGGGACCTAGGCTTAAACCCAGGTGACT
TGAGTAATGTTGATAAAATGTATAGGTTAACCATTGAGTCAACTAAGATTATTCAAGGGGAGGGAGTTAAGGCAGTTGCC
GTAGTTGGCGTGCACCCAGCTGAGTGCGTTAAGTTGCTTGAATCAGGTTGGGGCTTCAGTGAAGTTAAGGAATTCATGAT
TAAGACAATTGACTTAGCTGCACAGTACATTAGGAGGGGTGAGGCAGTGGGTATTGGGGAGATTGGTAGACCTCATTGGA
GCGTTAATGAGGGTGTAGTTGACTTATGTAATGAGATCATTGAGTACGCCATGGGTACTGCAAGGGACCTCAACGCCATT
ATTCACCTACACCTTGAGAGGAAGGGTGAGGCCACTGTTAAGTCAATAGTGGAGTTGGCTAATAAGGCTGGGGTTAAGGA
TAAGGGGAGGATCATCCTCCACCACGCCTCACCAAGCATGGTTAAGCCAGCTGTGGATAATGAACTAAAACCCTCAATAC
CAGTGGGTAGGAGGGGTGAGTTTGAGGAGGCTGTTAAGTTAACTAAGGCCCTAGTGGTTGAGAGTGATTACGCTGATGAC
CCAAGGAGACCAGGTATGGTTATACCACCCTGGAGGATACTGAGTAGGATTAATAATGCCTTGAACCAAGGCCTATTGAG
TGAAGATGATGCGTTTAGAATTATGGTTAATGAAATTGAGGAAACATATGGGGTTAAGTACGAGGGATGA

Upstream 100 bases:

>100_bases
TCACATTAATCATAGAGGACCCTACTGGAAACAGCATAATTAAGCCACCACCGGGTAGGGAGGGTAGGCTTAAGGAGGAT
AGGCTTGAGGTGCCTCAGGG

Downstream 100 bases:

>100_bases
GGCTCATTAAGTCAACGTTAAGCAACTTATATTAAGTAAGCCCCAGTGGCCCACTGGGAATCATGCTGCCTAATAGGGAT
TCCATTAAGGCTAAGTTAAG

Product: TatD-related deoxyribonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MSKALPIADNHTHVNPVKGLGPREVARRFKRTGGWFMGVVALLTWDLGLNPGDLSNVDKMYRLTIESTKIIQGEGVKAVA
VVGVHPAECVKLLESGWGFSEVKEFMIKTIDLAAQYIRRGEAVGIGEIGRPHWSVNEGVVDLCNEIIEYAMGTARDLNAI
IHLHLERKGEATVKSIVELANKAGVKDKGRIILHHASPSMVKPAVDNELKPSIPVGRRGEFEEAVKLTKALVVESDYADD
PRRPGMVIPPWRILSRINNALNQGLLSEDDAFRIMVNEIEETYGVKYEG

Sequences:

>Translated_289_residues
MSKALPIADNHTHVNPVKGLGPREVARRFKRTGGWFMGVVALLTWDLGLNPGDLSNVDKMYRLTIESTKIIQGEGVKAVA
VVGVHPAECVKLLESGWGFSEVKEFMIKTIDLAAQYIRRGEAVGIGEIGRPHWSVNEGVVDLCNEIIEYAMGTARDLNAI
IHLHLERKGEATVKSIVELANKAGVKDKGRIILHHASPSMVKPAVDNELKPSIPVGRRGEFEEAVKLTKALVVESDYADD
PRRPGMVIPPWRILSRINNALNQGLLSEDDAFRIMVNEIEETYGVKYEG
>Mature_288_residues
SKALPIADNHTHVNPVKGLGPREVARRFKRTGGWFMGVVALLTWDLGLNPGDLSNVDKMYRLTIESTKIIQGEGVKAVAV
VGVHPAECVKLLESGWGFSEVKEFMIKTIDLAAQYIRRGEAVGIGEIGRPHWSVNEGVVDLCNEIIEYAMGTARDLNAII
HLHLERKGEATVKSIVELANKAGVKDKGRIILHHASPSMVKPAVDNELKPSIPVGRRGEFEEAVKLTKALVVESDYADDP
RRPGMVIPPWRILSRINNALNQGLLSEDDAFRIMVNEIEETYGVKYEG

Specific function: Unknown

COG id: COG1831

COG function: function code R; Predicted metal-dependent hydrolase (urease superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001130
- InterPro:   IPR011589 [H]

Pfam domain/function: PF01026 TatD_DNase [H]

EC number: NA

Molecular weight: Translated: 31876; Mature: 31745

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKALPIADNHTHVNPVKGLGPREVARRFKRTGGWFMGVVALLTWDLGLNPGDLSNVDKM
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHH
YRLTIESTKIIQGEGVKAVAVVGVHPAECVKLLESGWGFSEVKEFMIKTIDLAAQYIRRG
HHEEECCCEEECCCCCEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
EAVGIGEIGRPHWSVNEGVVDLCNEIIEYAMGTARDLNAIIHLHLERKGEATVKSIVELA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHEEEEEEECCCCHHHHHHHHHHH
NKAGVKDKGRIILHHASPSMVKPAVDNELKPSIPVGRRGEFEEAVKLTKALVVESDYADD
HHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
PRRPGMVIPPWRILSRINNALNQGLLSEDDAFRIMVNEIEETYGVKYEG
CCCCCEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SKALPIADNHTHVNPVKGLGPREVARRFKRTGGWFMGVVALLTWDLGLNPGDLSNVDKM
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHH
YRLTIESTKIIQGEGVKAVAVVGVHPAECVKLLESGWGFSEVKEFMIKTIDLAAQYIRRG
HHEEECCCEEECCCCCEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
EAVGIGEIGRPHWSVNEGVVDLCNEIIEYAMGTARDLNAIIHLHLERKGEATVKSIVELA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHEEEEEEECCCCHHHHHHHHHHH
NKAGVKDKGRIILHHASPSMVKPAVDNELKPSIPVGRRGEFEEAVKLTKALVVESDYADD
HHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
PRRPGMVIPPWRILSRINNALNQGLLSEDDAFRIMVNEIEETYGVKYEG
CCCCCEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]