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The map label for this gene is pcaC [H]

Identifier: 159041053

GI number: 159041053

Start: 509622

End: 510338

Strand: Reverse

Name: pcaC [H]

Synonym: Cmaq_0470

Alternate gene names: 159041053

Gene position: 510338-509622 (Counterclockwise)

Preceding gene: 159041054

Following gene: 159041052

Centisome position: 24.56

GC content: 46.44

Gene sequence:

>717_bases
ATGATTATTAAACACAGTAGTTCCCAGGTATCGGAACAGGGTTCAGTGGAGTATTTTACTGGAAGCGCACACGTGTACCA
GCTCATTGATGCGTTGAGGATTAACGTAACCATGGTTACCCTTGAGCCGGGTACTAGGACTGTTTGGCACATTCACCCTC
TTGGCCAAGTCATTGTGATCATGCATGGGCGTGGTTTAGTGCAGCGTTGGGGTGAGTCAATTAGTGAGGTTAATCAAGGT
GATGTTATTTGGGTTGAACCAGGGGAGAAGCATTGGCAGGGTGCAACCGTTAATTCACCGGTAAGCTACATTGAGGTTAC
TGAGCCACTTAATGGTAAGGTTGTTGAGTTAATGGAGAGGGTTAGTGATGAAGAGTATTCTAAACATGGGCCTACCACTG
CGCAACGCCAAGTCACCCCCTTCTCAGACATAGCACCAGCCCTAGCCCACTACACTGACCATGTTCTCTTCGGTGATGTT
TGGAATAGGCCCGGTCTTTCACCAAGGGATAGGAGCCTAGTAACTGTGGCTGCACTTGTGGCGTTGTATAGGGTTAATGA
GTTACCGTTTCACTTAAGGAGGGCTATTGAGAATGGTGTAAGTAAAGATGAGTTAATTGAATTAATAACACACCTAGCCT
TCTACTCAGGTTGGCCAACGGCAAGCACAGCATTATCAATAGCCAGGAAGGTTTTTGAGGAACTTGGGGTAAAGTAA

Upstream 100 bases:

>100_bases
ATGAGGTAAAGTACCTTGAGGAACCATATAAGCCTAAGCCAGTACTTCACATACCTCCACCACCCATGTAGTAAACCCAG
TTAACTAGATGGGGTTATTC

Downstream 100 bases:

>100_bases
TGCATTTAATCAAGTACTTTATTGATATTAATGAGTGGTGTGTTAATGGTGGATAATAGGGGGTTCAATTACTTCATGGT
TAATGTACTCTACAGCCTAG

Product: carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MIIKHSSSQVSEQGSVEYFTGSAHVYQLIDALRINVTMVTLEPGTRTVWHIHPLGQVIVIMHGRGLVQRWGESISEVNQG
DVIWVEPGEKHWQGATVNSPVSYIEVTEPLNGKVVELMERVSDEEYSKHGPTTAQRQVTPFSDIAPALAHYTDHVLFGDV
WNRPGLSPRDRSLVTVAALVALYRVNELPFHLRRAIENGVSKDELIELITHLAFYSGWPTASTALSIARKVFEELGVK

Sequences:

>Translated_238_residues
MIIKHSSSQVSEQGSVEYFTGSAHVYQLIDALRINVTMVTLEPGTRTVWHIHPLGQVIVIMHGRGLVQRWGESISEVNQG
DVIWVEPGEKHWQGATVNSPVSYIEVTEPLNGKVVELMERVSDEEYSKHGPTTAQRQVTPFSDIAPALAHYTDHVLFGDV
WNRPGLSPRDRSLVTVAALVALYRVNELPFHLRRAIENGVSKDELIELITHLAFYSGWPTASTALSIARKVFEELGVK
>Mature_238_residues
MIIKHSSSQVSEQGSVEYFTGSAHVYQLIDALRINVTMVTLEPGTRTVWHIHPLGQVIVIMHGRGLVQRWGESISEVNQG
DVIWVEPGEKHWQGATVNSPVSYIEVTEPLNGKVVELMERVSDEEYSKHGPTTAQRQVTPFSDIAPALAHYTDHVLFGDV
WNRPGLSPRDRSLVTVAALVALYRVNELPFHLRRAIENGVSKDELIELITHLAFYSGWPTASTALSIARKVFEELGVK

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 26557; Mature: 26557

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIKHSSSQVSEQGSVEYFTGSAHVYQLIDALRINVTMVTLEPGTRTVWHIHPLGQVIVI
CEECCCCHHHHCCCCEEEEECCHHHHHHHHHHEEEEEEEEECCCCCEEEEEECCCEEEEE
MHGRGLVQRWGESISEVNQGDVIWVEPGEKHWQGATVNSPVSYIEVTEPLNGKVVELMER
ECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHH
VSDEEYSKHGPTTAQRQVTPFSDIAPALAHYTDHVLFGDVWNRPGLSPRDRSLVTVAALV
HCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHH
ALYRVNELPFHLRRAIENGVSKDELIELITHLAFYSGWPTASTALSIARKVFEELGVK
HHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIIKHSSSQVSEQGSVEYFTGSAHVYQLIDALRINVTMVTLEPGTRTVWHIHPLGQVIVI
CEECCCCHHHHCCCCEEEEECCHHHHHHHHHHEEEEEEEEECCCCCEEEEEECCCEEEEE
MHGRGLVQRWGESISEVNQGDVIWVEPGEKHWQGATVNSPVSYIEVTEPLNGKVVELMER
ECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHH
VSDEEYSKHGPTTAQRQVTPFSDIAPALAHYTDHVLFGDVWNRPGLSPRDRSLVTVAALV
HCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHH
ALYRVNELPFHLRRAIENGVSKDELIELITHLAFYSGWPTASTALSIARKVFEELGVK
HHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]