| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
Click here to switch to the map view.
The map label for this gene is 159041037
Identifier: 159041037
GI number: 159041037
Start: 491517
End: 492230
Strand: Reverse
Name: 159041037
Synonym: Cmaq_0454
Alternate gene names: NA
Gene position: 492230-491517 (Counterclockwise)
Preceding gene: 159041038
Following gene: 159041034
Centisome position: 23.69
GC content: 39.36
Gene sequence:
>714_bases ATGGATGTGTTAGTTGAGGTTAATCCATTAAGGGTTAAGCCTGAGGAGGTTAGTGGACTGCAGGTAACCTTGAATACAGT GGATTACATTAAGGGTAATTGGGGTAAGTCACTGCCTGAATTAGCCATTGAACTGGAGGAATATGAGCCATTAACGATTA GGGTACCAACACCAAGGAGGATTAGGGATTTCACTAGGATAATGGAATTAGCCAATTACCTAAACTTAAATGAAGTAATA ATAAGGCCCCCGGGGGGAAACCTGGATGATTTCCTTAATATAGCTGCTGAGTATAATATTGTATTATCATGGTTCGTGAA GACTGAGTCAGACATACCTCCTGTTCCTCCACCCCATAGGTTTAGTTTAACAGTTGATGTACCATCATTTAAGGGTTTAA GGAAACTACTTGAGTTCCTCTTACCTAATCTTAATATTGTGAGTTTCATTTATGCTCATAATATTAAGAATGGCAAGGGT GGTTACCCAATAATGAATGGTCCCATCGACTACTTGAAAATAATGAGAATATTGACTGCATTAGGGTGGAGTGGAGCCAC TGTGTTGAGTTACAGGGATGAGTTCACGGTGAATTATAGGAATGATGTTAATGCGTTAAAGGCATTCATTGAAAGTGCTG GATCAACTGTATTGGATAAGGGAACACTGAGGATGCTTAACTCCATAATGAGAAGGCTAATGGGTAATCCTTAA
Upstream 100 bases:
>100_bases GAGTTAAAGTATAAGATAGATACAGTAATGCTTAACCACCTTGAGTCAATTAGGTTAGTTTAGGGAAACATTAATTAACG TTAACTTGAATTAAGCATCA
Downstream 100 bases:
>100_bases TTCAAGGTTAACCCTCTAGCCGTTTAGGATTACTTGCTTTCTTATTATTTCTACTGTCGTAGTGAGTAGGGTTAAATTAT TATATTGCTTATTGAGTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MDVLVEVNPLRVKPEEVSGLQVTLNTVDYIKGNWGKSLPELAIELEEYEPLTIRVPTPRRIRDFTRIMELANYLNLNEVI IRPPGGNLDDFLNIAAEYNIVLSWFVKTESDIPPVPPPHRFSLTVDVPSFKGLRKLLEFLLPNLNIVSFIYAHNIKNGKG GYPIMNGPIDYLKIMRILTALGWSGATVLSYRDEFTVNYRNDVNALKAFIESAGSTVLDKGTLRMLNSIMRRLMGNP
Sequences:
>Translated_237_residues MDVLVEVNPLRVKPEEVSGLQVTLNTVDYIKGNWGKSLPELAIELEEYEPLTIRVPTPRRIRDFTRIMELANYLNLNEVI IRPPGGNLDDFLNIAAEYNIVLSWFVKTESDIPPVPPPHRFSLTVDVPSFKGLRKLLEFLLPNLNIVSFIYAHNIKNGKG GYPIMNGPIDYLKIMRILTALGWSGATVLSYRDEFTVNYRNDVNALKAFIESAGSTVLDKGTLRMLNSIMRRLMGNP >Mature_237_residues MDVLVEVNPLRVKPEEVSGLQVTLNTVDYIKGNWGKSLPELAIELEEYEPLTIRVPTPRRIRDFTRIMELANYLNLNEVI IRPPGGNLDDFLNIAAEYNIVLSWFVKTESDIPPVPPPHRFSLTVDVPSFKGLRKLLEFLLPNLNIVSFIYAHNIKNGKG GYPIMNGPIDYLKIMRILTALGWSGATVLSYRDEFTVNYRNDVNALKAFIESAGSTVLDKGTLRMLNSIMRRLMGNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26816; Mature: 26816
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVLVEVNPLRVKPEEVSGLQVTLNTVDYIKGNWGKSLPELAIELEEYEPLTIRVPTPRR CCEEEECCCCEECCCCCCCEEEEEEEHHHHCCCCCCCCHHHHHHHHCCCCEEEECCCCHH IRDFTRIMELANYLNLNEVIIRPPGGNLDDFLNIAAEYNIVLSWFVKTESDIPPVPPPHR HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCC FSLTVDVPSFKGLRKLLEFLLPNLNIVSFIYAHNIKNGKGGYPIMNGPIDYLKIMRILTA EEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH LGWSGATVLSYRDEFTVNYRNDVNALKAFIESAGSTVLDKGTLRMLNSIMRRLMGNP HCCCCCEEEEECCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDVLVEVNPLRVKPEEVSGLQVTLNTVDYIKGNWGKSLPELAIELEEYEPLTIRVPTPRR CCEEEECCCCEECCCCCCCEEEEEEEHHHHCCCCCCCCHHHHHHHHCCCCEEEECCCCHH IRDFTRIMELANYLNLNEVIIRPPGGNLDDFLNIAAEYNIVLSWFVKTESDIPPVPPPHR HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCC FSLTVDVPSFKGLRKLLEFLLPNLNIVSFIYAHNIKNGKGGYPIMNGPIDYLKIMRILTA EEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH LGWSGATVLSYRDEFTVNYRNDVNALKAFIESAGSTVLDKGTLRMLNSIMRRLMGNP HCCCCCEEEEECCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA