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The map label for this gene is wcaL [C]

Identifier: 159041027

GI number: 159041027

Start: 478736

End: 479899

Strand: Reverse

Name: wcaL [C]

Synonym: Cmaq_0444

Alternate gene names: 159041027

Gene position: 479899-478736 (Counterclockwise)

Preceding gene: 159041028

Following gene: 159041025

Centisome position: 23.1

GC content: 43.99

Gene sequence:

>1164_bases
ATGAGGGTACTTCATCTTTCCTGGGAGTACCCACCACACATAGTTGGTGGCTTAGGTAGGCACGTGTACTACATAACCCA
TGAGCTCATTAAACTGGGTGTTAATATTGATGTAGCCACTGTGGGTTATGAAGACACCCACGTTATTGATGAGGGTGTTA
ACGTGCATTTAATCGACGCATTCAAGGTTAGGGTACCTGACTTCTCATCATGGGTTCACTCCTTCAACATATTCATGATG
ATGGATTTAAGCCACATAAGTGAGGTTGATGCAATTCACGTTCACGACTGGTTAACTGCACCGGCAGGTATTGTGCTTAA
GCATAGGTTTAAGATACCCTTAATAGCCACAATACACGCCACGGAATACGGCAGGAGGGGTGGATTGCATAGCCTTGAGT
CCAAGCATATTCATGAGTGGGAGTGGTTACTTGCCTATGAGGCATGGAAGATCATAGTCTGCAGCAACTACATGGCCAAT
GAGGTGAAGAGCGTCTTCGGTGTGCCTGATGATAAAATAGTTATGATACCTAACGGCATAGATAAGGCGCTACTCAGCTT
TAAGCCTAAGTACGACCGCTCCAGGTACGCTTACCCCTGGGAATTACTAATAGTGTTCTACGGTAGGTTAGTTTACGAGA
AGGGTCCTGACTCTGTGATTAGGGCTTTCGCCAAGTTAATGAGCAGGATGAGTAACATTAAACTCGTAATAATTGGTGAT
GGGCCGATGAGGGAGTACTTAGTTAACCTGGCTAATCAACTTGGGTTAGGTAGTAAGGTTTACTTCACAGGTAAGGTGAG
TGACGATGAGTTATACAGCATAATAGCTCACTCAAATCTAGTCATATTGCCAAGTAGATATGAGCCATTCGGTATAAGTG
CACTTGAGGCCATGGCGCTTGGTAAACCATTAATAGCAACTAATAGGGGTGGGCCAACGGACTTCATTAGACATATGGAG
AATGGGGTATTAATCAACCCAGATAACCCTGATGAAATAGCCTACTACGCCGAGATGCTGCTTAAGGATGAGGGCTTAGC
CCGTAGGTTAGCTAATGAGGCTAGGGGAACGATAATGAAGGGGTACACTTGGGATATTATAGCTAAGAAAACTTATGAAC
TCTATAAAACAATAATTGAGGAGAGGGCTAAGGTTAATTGGTAA

Upstream 100 bases:

>100_bases
ATGGGCTTAAGCAGAGGACTGTGGATTATTTTAAGAATAGGTTCAATATAAACGCCGACTACGTACCAACAATTGATGAG
TTAGCCAGGGTGGTGGTTAA

Downstream 100 bases:

>100_bases
ATACGTTAACTAAGAAGCTTATCATAGATCTTTAACGCAATGAGCATGTGCCCCTTCCTAGTTGGGTGAACTGCATCAGG
GGCTAGAGCCTCAGGCTCAA

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MRVLHLSWEYPPHIVGGLGRHVYYITHELIKLGVNIDVATVGYEDTHVIDEGVNVHLIDAFKVRVPDFSSWVHSFNIFMM
MDLSHISEVDAIHVHDWLTAPAGIVLKHRFKIPLIATIHATEYGRRGGLHSLESKHIHEWEWLLAYEAWKIIVCSNYMAN
EVKSVFGVPDDKIVMIPNGIDKALLSFKPKYDRSRYAYPWELLIVFYGRLVYEKGPDSVIRAFAKLMSRMSNIKLVIIGD
GPMREYLVNLANQLGLGSKVYFTGKVSDDELYSIIAHSNLVILPSRYEPFGISALEAMALGKPLIATNRGGPTDFIRHME
NGVLINPDNPDEIAYYAEMLLKDEGLARRLANEARGTIMKGYTWDIIAKKTYELYKTIIEERAKVNW

Sequences:

>Translated_387_residues
MRVLHLSWEYPPHIVGGLGRHVYYITHELIKLGVNIDVATVGYEDTHVIDEGVNVHLIDAFKVRVPDFSSWVHSFNIFMM
MDLSHISEVDAIHVHDWLTAPAGIVLKHRFKIPLIATIHATEYGRRGGLHSLESKHIHEWEWLLAYEAWKIIVCSNYMAN
EVKSVFGVPDDKIVMIPNGIDKALLSFKPKYDRSRYAYPWELLIVFYGRLVYEKGPDSVIRAFAKLMSRMSNIKLVIIGD
GPMREYLVNLANQLGLGSKVYFTGKVSDDELYSIIAHSNLVILPSRYEPFGISALEAMALGKPLIATNRGGPTDFIRHME
NGVLINPDNPDEIAYYAEMLLKDEGLARRLANEARGTIMKGYTWDIIAKKTYELYKTIIEERAKVNW
>Mature_387_residues
MRVLHLSWEYPPHIVGGLGRHVYYITHELIKLGVNIDVATVGYEDTHVIDEGVNVHLIDAFKVRVPDFSSWVHSFNIFMM
MDLSHISEVDAIHVHDWLTAPAGIVLKHRFKIPLIATIHATEYGRRGGLHSLESKHIHEWEWLLAYEAWKIIVCSNYMAN
EVKSVFGVPDDKIVMIPNGIDKALLSFKPKYDRSRYAYPWELLIVFYGRLVYEKGPDSVIRAFAKLMSRMSNIKLVIIGD
GPMREYLVNLANQLGLGSKVYFTGKVSDDELYSIIAHSNLVILPSRYEPFGISALEAMALGKPLIATNRGGPTDFIRHME
NGVLINPDNPDEIAYYAEMLLKDEGLARRLANEARGTIMKGYTWDIIAKKTYELYKTIIEERAKVNW

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17532709, Length=377, Percent_Identity=25.4641909814324, Blast_Score=88, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI32564184, Length=408, Percent_Identity=24.2647058823529, Blast_Score=76, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI9755344, Length=390, Percent_Identity=22.3076923076923, Blast_Score=79, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 44143; Mature: 44143

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLHLSWEYPPHIVGGLGRHVYYITHELIKLGVNIDVATVGYEDTHVIDEGVNVHLIDA
CEEEEEECCCCCHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCEEEEEEE
FKVRVPDFSSWVHSFNIFMMMDLSHISEVDAIHVHDWLTAPAGIVLKHRFKIPLIATIHA
EEEECCCHHHHHHHCEEEEEEEHHHHCCCCEEEEHHHHCCCCCEEEEEEECCCEEEEEEC
TEYGRRGGLHSLESKHIHEWEWLLAYEAWKIIVCSNYMANEVKSVFGVPDDKIVMIPNGI
CCCCCCCCCCCCCCCCCCHHHEEEEEEEEEEEEECCHHHHHHHHHHCCCCCCEEEECCCH
DKALLSFKPKYDRSRYAYPWELLIVFYGRLVYEKGPDSVIRAFAKLMSRMSNIKLVIIGD
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEECC
GPMREYLVNLANQLGLGSKVYFTGKVSDDELYSIIAHSNLVILPSRYEPFGISALEAMAL
CHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHEECCCEEEECCCCCCCCHHHHHHHHC
GKPLIATNRGGPTDFIRHMENGVLINPDNPDEIAYYAEMLLKDEGLARRLANEARGTIMK
CCCEEECCCCCHHHHHHHHCCCEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEC
GYTWDIIAKKTYELYKTIIEERAKVNW
CCEEEEHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRVLHLSWEYPPHIVGGLGRHVYYITHELIKLGVNIDVATVGYEDTHVIDEGVNVHLIDA
CEEEEEECCCCCHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCEEEEEEE
FKVRVPDFSSWVHSFNIFMMMDLSHISEVDAIHVHDWLTAPAGIVLKHRFKIPLIATIHA
EEEECCCHHHHHHHCEEEEEEEHHHHCCCCEEEEHHHHCCCCCEEEEEEECCCEEEEEEC
TEYGRRGGLHSLESKHIHEWEWLLAYEAWKIIVCSNYMANEVKSVFGVPDDKIVMIPNGI
CCCCCCCCCCCCCCCCCCHHHEEEEEEEEEEEEECCHHHHHHHHHHCCCCCCEEEECCCH
DKALLSFKPKYDRSRYAYPWELLIVFYGRLVYEKGPDSVIRAFAKLMSRMSNIKLVIIGD
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEECC
GPMREYLVNLANQLGLGSKVYFTGKVSDDELYSIIAHSNLVILPSRYEPFGISALEAMAL
CHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHEECCCEEEECCCCCCCCHHHHHHHHC
GKPLIATNRGGPTDFIRHMENGVLINPDNPDEIAYYAEMLLKDEGLARRLANEARGTIMK
CCCEEECCCCCHHHHHHHHCCCEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEC
GYTWDIIAKKTYELYKTIIEERAKVNW
CCEEEEHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]