Definition Caldivirga maquilingensis IC-167 chromosome, complete genome.
Accession NC_009954
Length 2,077,567

Click here to switch to the map view.

The map label for this gene is 159041000

Identifier: 159041000

GI number: 159041000

Start: 450896

End: 451225

Strand: Reverse

Name: 159041000

Synonym: Cmaq_0417

Alternate gene names: NA

Gene position: 451225-450896 (Counterclockwise)

Preceding gene: 159041004

Following gene: 159040999

Centisome position: 21.72

GC content: 42.12

Gene sequence:

>330_bases
ATGGGTAAGAGTAGGCAGTTACTGTTAAGTAGCATTAAGGCCTTGGGGCTTGCTAATGATGCAAGTAGGAGGATTCTTGA
GTTAGCCTTAATTTACGCATATAATAATAAAATAGATAAGTACTCCCTCTACTCAATACTAAGGGTTATTGACTTAAACA
TGGCCACTGCAGTGAGTAGGCTTAGGCCCATTAATGATGAGGTGGCTGAGGTTAATGAAGTTGAGGTTGTTGAGGTTAAT
GATGAGGTTGTGGGTAATGTTGAAAGTAGGGTTGAGGACAAGTACCTTGGGCAGAGGGTTATGGAGAGGCTGATGCCTAA
TGAGCAGTGA

Upstream 100 bases:

>100_bases
GCGTAATTTACGTAGCAGCTTATTTGCTTAAACTTTAAACTCATGGTGAGTACAGATTCTACACGTTAGTTTTTAATGTA
GTTAATGAGAATCAGTAATC

Downstream 100 bases:

>100_bases
GTCACCTTTAATTAAGCTACTTACCACCAAGTACTCTAGGTTCCTTGGGGGTATTGATGCATCAAGGGCGCTTAGGGATA
ATGAGGAGGCTAGGGTTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MGKSRQLLLSSIKALGLANDASRRILELALIYAYNNKIDKYSLYSILRVIDLNMATAVSRLRPINDEVAEVNEVEVVEVN
DEVVGNVESRVEDKYLGQRVMERLMPNEQ

Sequences:

>Translated_109_residues
MGKSRQLLLSSIKALGLANDASRRILELALIYAYNNKIDKYSLYSILRVIDLNMATAVSRLRPINDEVAEVNEVEVVEVN
DEVVGNVESRVEDKYLGQRVMERLMPNEQ
>Mature_108_residues
GKSRQLLLSSIKALGLANDASRRILELALIYAYNNKIDKYSLYSILRVIDLNMATAVSRLRPINDEVAEVNEVEVVEVND
EVVGNVESRVEDKYLGQRVMERLMPNEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12381; Mature: 12250

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKSRQLLLSSIKALGLANDASRRILELALIYAYNNKIDKYSLYSILRVIDLNMATAVSR
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LRPINDEVAEVNEVEVVEVNDEVVGNVESRVEDKYLGQRVMERLMPNEQ
HCCCCHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GKSRQLLLSSIKALGLANDASRRILELALIYAYNNKIDKYSLYSILRVIDLNMATAVSR
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LRPINDEVAEVNEVEVVEVNDEVVGNVESRVEDKYLGQRVMERLMPNEQ
HCCCCHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA