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The map label for this gene is ybhR [H]

Identifier: 159040947

GI number: 159040947

Start: 400750

End: 401619

Strand: Reverse

Name: ybhR [H]

Synonym: Cmaq_0363

Alternate gene names: 159040947

Gene position: 401619-400750 (Counterclockwise)

Preceding gene: 159040948

Following gene: 159040946

Centisome position: 19.33

GC content: 43.33

Gene sequence:

>870_bases
ATGGGTAATCCACTCCATGGTCTATGGGCTTTAACTGATAGGGAACTTAAGAAGTGGTATAAGGCGCCAGTGGTCCTAAT
AGTAACGTTAATTCAGCCAATAGTTTGGTTAGCATTCTTCGGTAAGTCAATGAACATGACCTCAATATTCACTAACGGTA
GCGTTAACATACCTGGATTAAACATACCTAAGCAGATTATTGATCAAATAGCCCAAGCCTACTTAAAGTCAACCTTCGGG
ACAACGGACTACTTCTCCTTCCTAGCTGCATCAATGGTTGCTCAAATAACCTTCTTCACAGCAATGAATAGTGGAATGAG
TATAGTGTGGGATAGGAGACTGGGTGTATTGGGTAAGTTACTTACAACACCAGTGCCTAGGGGTAGTATAATAATGGGTA
AGGTACTTAACTCAGTGATAAGGTCACTTGCCCAAGCCACCATAGTGCTGCTAATAGCCGTGCTCCTAGGCATGAAGTTC
AACACCAAGTTAACCCCCCTTGAATTCGCCTTAAGCGTAGTCGGCGTCTACGCTGCATTAACGCTGCTTTCCCTAGGATT
CTCATCACTGTACCTAACCCTAGCACTTCGTTCAACTAATTGGCAGTCCCAAATGGCTATAATAAATCTACTTAACATGC
CCTTAATGTTCGCAAGCAACTCCTTCTACCCAATAAAGATGATGCCCTGGTGGCTTAGACCAATAGCCTACATAAACCCA
TTAACGTACGTTAATGATGTAACCAGGGGATTACTACTGGGTGCATCATCATTCAGTGTACCCATGGACTTCCTATACTT
AACAATATTCGCAGTCGTGTTCTCGGCTATAGGGATAGTACTGTCTTGGCGCTTCCTAAGTGAAGCCTAA

Upstream 100 bases:

>100_bases
CATGGAGTACACGGGCCATAGTCTAAGGGATGAGTGGGGTAGTAGGGAGGAGGCTATGGCCATGAGGAGGATTATAAGTA
CTGCCAGGAGGTGATGGGGA

Downstream 100 bases:

>100_bases
TTAAAATCACCATTAATCCTTAGTATTGAATCAATGTTATTAAAGTTAACTTGAATTAAACCAGGATGCATGCGTAAATT
CATTGCGCTTAAAGTCTCAT

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MGNPLHGLWALTDRELKKWYKAPVVLIVTLIQPIVWLAFFGKSMNMTSIFTNGSVNIPGLNIPKQIIDQIAQAYLKSTFG
TTDYFSFLAASMVAQITFFTAMNSGMSIVWDRRLGVLGKLLTTPVPRGSIIMGKVLNSVIRSLAQATIVLLIAVLLGMKF
NTKLTPLEFALSVVGVYAALTLLSLGFSSLYLTLALRSTNWQSQMAIINLLNMPLMFASNSFYPIKMMPWWLRPIAYINP
LTYVNDVTRGLLLGASSFSVPMDFLYLTIFAVVFSAIGIVLSWRFLSEA

Sequences:

>Translated_289_residues
MGNPLHGLWALTDRELKKWYKAPVVLIVTLIQPIVWLAFFGKSMNMTSIFTNGSVNIPGLNIPKQIIDQIAQAYLKSTFG
TTDYFSFLAASMVAQITFFTAMNSGMSIVWDRRLGVLGKLLTTPVPRGSIIMGKVLNSVIRSLAQATIVLLIAVLLGMKF
NTKLTPLEFALSVVGVYAALTLLSLGFSSLYLTLALRSTNWQSQMAIINLLNMPLMFASNSFYPIKMMPWWLRPIAYINP
LTYVNDVTRGLLLGASSFSVPMDFLYLTIFAVVFSAIGIVLSWRFLSEA
>Mature_288_residues
GNPLHGLWALTDRELKKWYKAPVVLIVTLIQPIVWLAFFGKSMNMTSIFTNGSVNIPGLNIPKQIIDQIAQAYLKSTFGT
TDYFSFLAASMVAQITFFTAMNSGMSIVWDRRLGVLGKLLTTPVPRGSIIMGKVLNSVIRSLAQATIVLLIAVLLGMKFN
TKLTPLEFALSVVGVYAALTLLSLGFSSLYLTLALRSTNWQSQMAIINLLNMPLMFASNSFYPIKMMPWWLRPIAYINPL
TYVNDVTRGLLLGASSFSVPMDFLYLTIFAVVFSAIGIVLSWRFLSEA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=180, Percent_Identity=29.4444444444444, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 32042; Mature: 31911

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNPLHGLWALTDRELKKWYKAPVVLIVTLIQPIVWLAFFGKSMNMTSIFTNGSVNIPGL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEECCCC
NIPKQIIDQIAQAYLKSTFGTTDYFSFLAASMVAQITFFTAMNSGMSIVWDRRLGVLGKL
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHH
LTTPVPRGSIIMGKVLNSVIRSLAQATIVLLIAVLLGMKFNTKLTPLEFALSVVGVYAAL
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
TLLSLGFSSLYLTLALRSTNWQSQMAIINLLNMPLMFASNSFYPIKMMPWWLRPIAYINP
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHCCCCCCEEECCHHHHHHHHHHCH
LTYVNDVTRGLLLGASSFSVPMDFLYLTIFAVVFSAIGIVLSWRFLSEA
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GNPLHGLWALTDRELKKWYKAPVVLIVTLIQPIVWLAFFGKSMNMTSIFTNGSVNIPGL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEECCCC
NIPKQIIDQIAQAYLKSTFGTTDYFSFLAASMVAQITFFTAMNSGMSIVWDRRLGVLGKL
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHH
LTTPVPRGSIIMGKVLNSVIRSLAQATIVLLIAVLLGMKFNTKLTPLEFALSVVGVYAAL
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
TLLSLGFSSLYLTLALRSTNWQSQMAIINLLNMPLMFASNSFYPIKMMPWWLRPIAYINP
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHCCCCCCEEECCHHHHHHHHHHCH
LTYVNDVTRGLLLGASSFSVPMDFLYLTIFAVVFSAIGIVLSWRFLSEA
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]