| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159040936
Identifier: 159040936
GI number: 159040936
Start: 391500
End: 391793
Strand: Reverse
Name: 159040936
Synonym: Cmaq_0352
Alternate gene names: NA
Gene position: 391793-391500 (Counterclockwise)
Preceding gene: 159040938
Following gene: 159040935
Centisome position: 18.86
GC content: 36.73
Gene sequence:
>294_bases ATGATGCCTATTAATGTTAATGAAATTATTGGTAAATTAATTAATGAGATTAGGAATTACGGGCAGGTTACCGTTGAGGA TTATGGATCAGAGAAGCTTATTATGGTTAAGTTAACCGAGGATTTTTCAGTATTCATATCAATACTATGTGAAGACACTG AATGCAATGTGGAGTACGCTGTTGGTGACGAGAACTTCACCATAATGCCCAAGGACCTGGACTTAATTGATAAGGCAGTG GAGGTTATGAGGATTATTAATAGCGCCTTAATTAAAATGGGGGTGGTTAAGTGA
Upstream 100 bases:
>100_bases ATTTAAGTTTACCTAAAGTGACCTTAACCATGAGTTAGCTCATTAATAGGCCTTTAAAACAAGCGTGAGTAACCTTTATA TTCTTGGGATAGGAAGCATC
Downstream 100 bases:
>100_bases GGCGTGGTTTAAGGCTTGACTCAATTAACGCCCGTAAGATACGTGGACCAGACGGTTTCTTCACAGTGGCTATGGGTATT GAGGTATTTAGGCTCATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MMPINVNEIIGKLINEIRNYGQVTVEDYGSEKLIMVKLTEDFSVFISILCEDTECNVEYAVGDENFTIMPKDLDLIDKAV EVMRIINSALIKMGVVK
Sequences:
>Translated_97_residues MMPINVNEIIGKLINEIRNYGQVTVEDYGSEKLIMVKLTEDFSVFISILCEDTECNVEYAVGDENFTIMPKDLDLIDKAV EVMRIINSALIKMGVVK >Mature_97_residues MMPINVNEIIGKLINEIRNYGQVTVEDYGSEKLIMVKLTEDFSVFISILCEDTECNVEYAVGDENFTIMPKDLDLIDKAV EVMRIINSALIKMGVVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10975; Mature: 10975
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPINVNEIIGKLINEIRNYGQVTVEDYGSEKLIMVKLTEDFSVFISILCEDTECNVEYA CCCCCHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCHHHHHHHHCCCCCCCEEEE VGDENFTIMPKDLDLIDKAVEVMRIINSALIKMGVVK ECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MMPINVNEIIGKLINEIRNYGQVTVEDYGSEKLIMVKLTEDFSVFISILCEDTECNVEYA CCCCCHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCHHHHHHHHCCCCCCCEEEE VGDENFTIMPKDLDLIDKAVEVMRIINSALIKMGVVK ECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA