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The map label for this gene is ycgM [C]

Identifier: 159040918

GI number: 159040918

Start: 370728

End: 371642

Strand: Reverse

Name: ycgM [C]

Synonym: Cmaq_0334

Alternate gene names: 159040918

Gene position: 371642-370728 (Counterclockwise)

Preceding gene: 159040923

Following gene: 159040916

Centisome position: 17.89

GC content: 45.68

Gene sequence:

>915_bases
ATGAGACTATTAACCTTCGAACAGGGCGGCGTAGTTAGGGTTGGGGCATACACTGGTAGGGGTGTTGTTGATTTACCTAA
AGCATACGTCACAATTTATGAGGCTGAATCAGCCCCAGACTTCCTCTACTCCATGAGGAAGCTAATTGAGAATGGTGAAC
CAGCATTAAGCATTGTTAATGATTTAATTAATAAGACCCTTAAGTCAAGTAGAGAGGATTTACTGCTTAACCCATCATCA
ATCAACTGGCTCCCCCCAGTCACTGACCCTGAGAAGATCCTGTGCGTTGCAGTTAATTACAGGGCTCACGGCGAGGAAAG
TAGCACTAAACCCCCTGAGAGGCCATACTTCTTCCCGAAGTTCCGTAACGCCTTAATCGGTAATGGACAACCCATAGTTA
AGCCTAAGGCCTCCAATAAGATGGATTGGGAGGTGGAACTTGGTGTCGTGATAGGTAGGAGGGGTAAGTACATTGATGTT
AAGGATGCCTTCAACCACGTTTTCGGCTACGTGGTAACTAACGACGTCTCCATGAGGGATTGGCAATTCCCCTCAATGGA
TCAATTCGGTATGGATTGGATACACGGTAAATCCATGGATGGGGCAATGCCAGTGGGCCCATACATTGTGACTAAGGATG
AGATAAATGACCCACATAATCTAAGGTTAACGCTCAGGGTTAATGGATCAGTGGAGCAGGATGGTAATACAAGGGATTTA
ATATTCAAGATACCTGACTTAATACACTGGGCAACCCAAGGCATAACACTTAAACCAGGCGACTACATATCCACAGGCAC
CCCATCTGGTGTTGGATTCCCCAAGGGCAAGTTCCTAAAGCATGGTGACTTAGTCGAAGCCGAGGTCGAGGGCATAGGTA
TTTTAAGAAACCCAGTTATTGAAGAAAAGCCTTAA

Upstream 100 bases:

>100_bases
GGGTTTATCATGCGGTTAAGCAATGCACTTAACCGTATTTAACTATTATTCAAATTAAAGTATGGTTAATACTTATTTAT
CCAGGTAACTAAGCCTAACT

Downstream 100 bases:

>100_bases
TGACCACTTAAAATAACCTTCATCCCTCTAGATTTTTACCTCAACCATAATCAACAAACGCACTAAAATAATGAACCCCC
CACCTCTTAATCCAAAGCAC

Product: 5-carboxymethyl-2-hydroxymuconate Delta-isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MRLLTFEQGGVVRVGAYTGRGVVDLPKAYVTIYEAESAPDFLYSMRKLIENGEPALSIVNDLINKTLKSSREDLLLNPSS
INWLPPVTDPEKILCVAVNYRAHGEESSTKPPERPYFFPKFRNALIGNGQPIVKPKASNKMDWEVELGVVIGRRGKYIDV
KDAFNHVFGYVVTNDVSMRDWQFPSMDQFGMDWIHGKSMDGAMPVGPYIVTKDEINDPHNLRLTLRVNGSVEQDGNTRDL
IFKIPDLIHWATQGITLKPGDYISTGTPSGVGFPKGKFLKHGDLVEAEVEGIGILRNPVIEEKP

Sequences:

>Translated_304_residues
MRLLTFEQGGVVRVGAYTGRGVVDLPKAYVTIYEAESAPDFLYSMRKLIENGEPALSIVNDLINKTLKSSREDLLLNPSS
INWLPPVTDPEKILCVAVNYRAHGEESSTKPPERPYFFPKFRNALIGNGQPIVKPKASNKMDWEVELGVVIGRRGKYIDV
KDAFNHVFGYVVTNDVSMRDWQFPSMDQFGMDWIHGKSMDGAMPVGPYIVTKDEINDPHNLRLTLRVNGSVEQDGNTRDL
IFKIPDLIHWATQGITLKPGDYISTGTPSGVGFPKGKFLKHGDLVEAEVEGIGILRNPVIEEKP
>Mature_304_residues
MRLLTFEQGGVVRVGAYTGRGVVDLPKAYVTIYEAESAPDFLYSMRKLIENGEPALSIVNDLINKTLKSSREDLLLNPSS
INWLPPVTDPEKILCVAVNYRAHGEESSTKPPERPYFFPKFRNALIGNGQPIVKPKASNKMDWEVELGVVIGRRGKYIDV
KDAFNHVFGYVVTNDVSMRDWQFPSMDQFGMDWIHGKSMDGAMPVGPYIVTKDEINDPHNLRLTLRVNGSVEQDGNTRDL
IFKIPDLIHWATQGITLKPGDYISTGTPSGVGFPKGKFLKHGDLVEAEVEGIGILRNPVIEEKP

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI156231349, Length=306, Percent_Identity=41.1764705882353, Blast_Score=227, Evalue=1e-59,
Organism=Homo sapiens, GI40786394, Length=306, Percent_Identity=40.1960784313725, Blast_Score=217, Evalue=9e-57,
Organism=Homo sapiens, GI66348062, Length=213, Percent_Identity=36.6197183098592, Blast_Score=133, Evalue=2e-31,
Organism=Homo sapiens, GI215422413, Length=200, Percent_Identity=37.5, Blast_Score=131, Evalue=7e-31,
Organism=Homo sapiens, GI13654274, Length=200, Percent_Identity=37.5, Blast_Score=131, Evalue=9e-31,
Organism=Escherichia coli, GI1787428, Length=193, Percent_Identity=36.2694300518135, Blast_Score=117, Evalue=7e-28,
Organism=Caenorhabditis elegans, GI17557057, Length=195, Percent_Identity=37.9487179487179, Blast_Score=138, Evalue=3e-33,
Organism=Saccharomyces cerevisiae, GI6324161, Length=243, Percent_Identity=25.9259259259259, Blast_Score=82, Evalue=1e-16,
Organism=Drosophila melanogaster, GI28572127, Length=235, Percent_Identity=43.4042553191489, Blast_Score=199, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24663695, Length=222, Percent_Identity=38.7387387387387, Blast_Score=162, Evalue=2e-40,
Organism=Drosophila melanogaster, GI28571789, Length=207, Percent_Identity=38.1642512077295, Blast_Score=132, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: NA

Molecular weight: Translated: 33911; Mature: 33911

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLTFEQGGVVRVGAYTGRGVVDLPKAYVTIYEAESAPDFLYSMRKLIENGEPALSIVN
CEEEEECCCCEEEEECCCCCCCEECCCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHH
DLINKTLKSSREDLLLNPSSINWLPPVTDPEKILCVAVNYRAHGEESSTKPPERPYFFPK
HHHHHHHHCCCCCEEECCCCCCCCCCCCCCCEEEEEEEECEECCCCCCCCCCCCCEECHH
FRNALIGNGQPIVKPKASNKMDWEVELGVVIGRRGKYIDVKDAFNHVFGYVVTNDVSMRD
HHHHHCCCCCEEECCCCCCCCCEEEEEEEEECCCCCEEEHHHHHHHHEEEEEECCCCCCC
WQFPSMDQFGMDWIHGKSMDGAMPVGPYIVTKDEINDPHNLRLTLRVNGSVEQDGNTRDL
CCCCCCHHHCCHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEE
IFKIPDLIHWATQGITLKPGDYISTGTPSGVGFPKGKFLKHGDLVEAEVEGIGILRNPVI
EEECHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCEECCCEEEEHHCCEEEECCCCC
EEKP
CCCC
>Mature Secondary Structure
MRLLTFEQGGVVRVGAYTGRGVVDLPKAYVTIYEAESAPDFLYSMRKLIENGEPALSIVN
CEEEEECCCCEEEEECCCCCCCEECCCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHH
DLINKTLKSSREDLLLNPSSINWLPPVTDPEKILCVAVNYRAHGEESSTKPPERPYFFPK
HHHHHHHHCCCCCEEECCCCCCCCCCCCCCCEEEEEEEECEECCCCCCCCCCCCCEECHH
FRNALIGNGQPIVKPKASNKMDWEVELGVVIGRRGKYIDVKDAFNHVFGYVVTNDVSMRD
HHHHHCCCCCEEECCCCCCCCCEEEEEEEEECCCCCEEEHHHHHHHHEEEEEECCCCCCC
WQFPSMDQFGMDWIHGKSMDGAMPVGPYIVTKDEINDPHNLRLTLRVNGSVEQDGNTRDL
CCCCCCHHHCCHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEE
IFKIPDLIHWATQGITLKPGDYISTGTPSGVGFPKGKFLKHGDLVEAEVEGIGILRNPVI
EEECHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCEECCCEEEEHHCCEEEECCCCC
EEKP
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]