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The map label for this gene is 159040884

Identifier: 159040884

GI number: 159040884

Start: 336416

End: 337981

Strand: Reverse

Name: 159040884

Synonym: Cmaq_0298

Alternate gene names: NA

Gene position: 337981-336416 (Counterclockwise)

Preceding gene: 159040885

Following gene: 159040883

Centisome position: 16.27

GC content: 46.74

Gene sequence:

>1566_bases
ATGCTTGCAGCTGGGGAAATCTATATTCCGGATACGTCAGTCTTCCTAGATGGGTCTCTGAAGGAGTATCTGCAGAGTAA
TGGGCTTAAGGGTAGGTTACTGATTCATACTGGTGTCGTTAAGTACTTTGAGGATGACGCTAAGGTTGGTTCTTCACTGG
GTATACTTGGGCTTGAGGAGGTGGCTGCTATTCATGACATGGCCTCTAAGATTGAGGGGATTACTGTGGAGTACGTTGAC
GTTATACCAAGGTCAGCTGACTTAAAGGACCCTGAGAGCCTTGTTTTAAACACTGCTAGGGAATTGGGGGCGGTTTTAAT
AACTAGTGATGCTATGGTTAAGAAGGTTTGCGAGGCAATGGGTATTAGGTACATTTACATCGGTAAGGGGACTGGGGCCC
TTGAGATTGAGAAGTGGTTCCAAAAATACCCTGACACAATGTCAATACACCTTAAGGAGAACACCCTACCCATGGCTAAG
AGGGGTGCGCCAGGTAACTGGGAGTTGGTTTACCTTGATAATAAGGTCCTCTCCAAGGAGTACCTGGAGAGGCTGGTTAG
GGAAGTTATCTCAACAGCCTACAGTGGTGGTAATGGGGCGGTTATTGAGGTTAAGAGAAGCCACTCACTGATAGTTCAGT
ATAGGGATATTAGGATAGTGGCTGTTTTCCCACCTGTATCAGACGGCATAGAGATAACCGCTGTTAGGCCACTGGTTAAG
AAGCGTGTTGAGGAGTATAACCTCCATCCCAAGGTTGTTGAGAGGCTTGAGAAGAGGGCTGAGGGTATACTGATTGGTGG
TGCCCCAGGCGCTGGTAAAACCACCTTCGCTCAGGCCTTGGCTGAATTCTTCGTATCCAAGAATAAGGTGGTTAAGACCA
TTGAGTCACCGAGGGATATGGTTCTACCTGACCAGGTTACTCAACTCTCCAAGAACCTGGCCACCCCGGAGGAGCTTCAT
GACATCCTCCTATTATCGAGGCCGGACTACACAATATTTGATGAAATGAGGGATACCGCTGATATTCAACTTTACGTTGA
CCTTAGGTTGGCTGGAATAGGCATGGTTGGCGTCATCCATGCGACATCGCCCATAGACTCAATTCAAAGATTCATAGGTA
GGGTTGAATTAGGCATGTTACCCTCAATAGTGGATACTGTAATCTTCATAGATAAGGGGTTGGTTAGTAAGGTTTACTCA
CTGGAGATGACTGTTAAGATACCTGCTGGCTTAAAGGAGGAGGATTTAGCCAGACCGGTGGTTGTTGTTAAGGACTTCAT
AACGGAGGAACCTGAGTACGAGGTCTACGTCTTTGGTGAGGAAACCTTCGTAGTTCCCTTGAAGAGGAGGAGTGTGGAGG
TTAATAAGAGGGCTATGAATCAGTTACTTAAGGTGGTTGGTAAGTATGTGCCGCTTGATCAAGTTATAGTGGAGCCGAGG
GAAGATGTCCTAGTTATCAAGGTTCCTCAGGAGTACTATGGGTTAGTTTTATCCAAGGGCCTGCCTAGGATTGGTAGGAT
TAAGAGGAGGTTTAGGGTTGATGTTAGGATTGAGCCTAGGCAGTGA

Upstream 100 bases:

>100_bases
AATTACCATGAGGGTTAATTACCTTATTTAACTAATATTGAAGGTGAGTTAAGGCTCATAAGTTTTTAAGCCTCAGTGTA
TCCGCATTAACTGGTACTTA

Downstream 100 bases:

>100_bases
TTAACTAGTGTTCATTAATTAAGCCATTTAATTGCTTAAACTAATGGTGAATTCAAGGTAAAAGTATAAATATCCACCTA
GGGTTTAGGGCATATGGGTT

Product: ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 521; Mature: 521

Protein sequence:

>521_residues
MLAAGEIYIPDTSVFLDGSLKEYLQSNGLKGRLLIHTGVVKYFEDDAKVGSSLGILGLEEVAAIHDMASKIEGITVEYVD
VIPRSADLKDPESLVLNTARELGAVLITSDAMVKKVCEAMGIRYIYIGKGTGALEIEKWFQKYPDTMSIHLKENTLPMAK
RGAPGNWELVYLDNKVLSKEYLERLVREVISTAYSGGNGAVIEVKRSHSLIVQYRDIRIVAVFPPVSDGIEITAVRPLVK
KRVEEYNLHPKVVERLEKRAEGILIGGAPGAGKTTFAQALAEFFVSKNKVVKTIESPRDMVLPDQVTQLSKNLATPEELH
DILLLSRPDYTIFDEMRDTADIQLYVDLRLAGIGMVGVIHATSPIDSIQRFIGRVELGMLPSIVDTVIFIDKGLVSKVYS
LEMTVKIPAGLKEEDLARPVVVVKDFITEEPEYEVYVFGEETFVVPLKRRSVEVNKRAMNQLLKVVGKYVPLDQVIVEPR
EDVLVIKVPQEYYGLVLSKGLPRIGRIKRRFRVDVRIEPRQ

Sequences:

>Translated_521_residues
MLAAGEIYIPDTSVFLDGSLKEYLQSNGLKGRLLIHTGVVKYFEDDAKVGSSLGILGLEEVAAIHDMASKIEGITVEYVD
VIPRSADLKDPESLVLNTARELGAVLITSDAMVKKVCEAMGIRYIYIGKGTGALEIEKWFQKYPDTMSIHLKENTLPMAK
RGAPGNWELVYLDNKVLSKEYLERLVREVISTAYSGGNGAVIEVKRSHSLIVQYRDIRIVAVFPPVSDGIEITAVRPLVK
KRVEEYNLHPKVVERLEKRAEGILIGGAPGAGKTTFAQALAEFFVSKNKVVKTIESPRDMVLPDQVTQLSKNLATPEELH
DILLLSRPDYTIFDEMRDTADIQLYVDLRLAGIGMVGVIHATSPIDSIQRFIGRVELGMLPSIVDTVIFIDKGLVSKVYS
LEMTVKIPAGLKEEDLARPVVVVKDFITEEPEYEVYVFGEETFVVPLKRRSVEVNKRAMNQLLKVVGKYVPLDQVIVEPR
EDVLVIKVPQEYYGLVLSKGLPRIGRIKRRFRVDVRIEPRQ
>Mature_521_residues
MLAAGEIYIPDTSVFLDGSLKEYLQSNGLKGRLLIHTGVVKYFEDDAKVGSSLGILGLEEVAAIHDMASKIEGITVEYVD
VIPRSADLKDPESLVLNTARELGAVLITSDAMVKKVCEAMGIRYIYIGKGTGALEIEKWFQKYPDTMSIHLKENTLPMAK
RGAPGNWELVYLDNKVLSKEYLERLVREVISTAYSGGNGAVIEVKRSHSLIVQYRDIRIVAVFPPVSDGIEITAVRPLVK
KRVEEYNLHPKVVERLEKRAEGILIGGAPGAGKTTFAQALAEFFVSKNKVVKTIESPRDMVLPDQVTQLSKNLATPEELH
DILLLSRPDYTIFDEMRDTADIQLYVDLRLAGIGMVGVIHATSPIDSIQRFIGRVELGMLPSIVDTVIFIDKGLVSKVYS
LEMTVKIPAGLKEEDLARPVVVVKDFITEEPEYEVYVFGEETFVVPLKRRSVEVNKRAMNQLLKVVGKYVPLDQVIVEPR
EDVLVIKVPQEYYGLVLSKGLPRIGRIKRRFRVDVRIEPRQ

Specific function: Unknown

COG id: COG1855

COG function: function code R; ATPase (PilT family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004087
- InterPro:   IPR009019
- InterPro:   IPR004088
- InterPro:   IPR018111
- InterPro:   IPR002716
- InterPro:   IPR006596
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E; PF00013 KH_1; PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 58216; Mature: 58216

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAAGEIYIPDTSVFLDGSLKEYLQSNGLKGRLLIHTGVVKYFEDDAKVGSSLGILGLEE
CCCCCEEECCCCCEEECCHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHCCCCCCCCCHHH
VAAIHDMASKIEGITVEYVDVIPRSADLKDPESLVLNTARELGAVLITSDAMVKKVCEAM
HHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCEEEEECCHHHHHHHHHH
GIRYIYIGKGTGALEIEKWFQKYPDTMSIHLKENTLPMAKRGAPGNWELVYLDNKVLSKE
CCEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCHHHHHH
YLERLVREVISTAYSGGNGAVIEVKRSHSLIVQYRDIRIVAVFPPVSDGIEITAVRPLVK
HHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEEEEEEEEEECCCCCCEEEEEECHHHH
KRVEEYNLHPKVVERLEKRAEGILIGGAPGAGKTTFAQALAEFFVSKNKVVKTIESPRDM
HHHHHCCCCHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCC
VLPDQVTQLSKNLATPEELHDILLLSRPDYTIFDEMRDTADIQLYVDLRLAGIGMVGVIH
CCCHHHHHHHHHCCCHHHHHHEEEECCCCCHHHHHHCCCCEEEEEEEEEEECCCEEEEEE
ATSPIDSIQRFIGRVELGMLPSIVDTVIFIDKGLVSKVYSLEMTVKIPAGLKEEDLARPV
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHEEEEEEEECCCCCCHHHHCCCH
VVVKDFITEEPEYEVYVFGEETFVVPLKRRSVEVNKRAMNQLLKVVGKYVPLDQVIVEPR
HHHHHHHCCCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCC
EDVLVIKVPQEYYGLVLSKGLPRIGRIKRRFRVDVRIEPRQ
CCEEEEEECHHHHHHHHHCCCCHHHHHHHHEEEEEEECCCC
>Mature Secondary Structure
MLAAGEIYIPDTSVFLDGSLKEYLQSNGLKGRLLIHTGVVKYFEDDAKVGSSLGILGLEE
CCCCCEEECCCCCEEECCHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHCCCCCCCCCHHH
VAAIHDMASKIEGITVEYVDVIPRSADLKDPESLVLNTARELGAVLITSDAMVKKVCEAM
HHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCEEEEECCHHHHHHHHHH
GIRYIYIGKGTGALEIEKWFQKYPDTMSIHLKENTLPMAKRGAPGNWELVYLDNKVLSKE
CCEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCHHHHHH
YLERLVREVISTAYSGGNGAVIEVKRSHSLIVQYRDIRIVAVFPPVSDGIEITAVRPLVK
HHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEEEEEEEEEECCCCCCEEEEEECHHHH
KRVEEYNLHPKVVERLEKRAEGILIGGAPGAGKTTFAQALAEFFVSKNKVVKTIESPRDM
HHHHHCCCCHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCC
VLPDQVTQLSKNLATPEELHDILLLSRPDYTIFDEMRDTADIQLYVDLRLAGIGMVGVIH
CCCHHHHHHHHHCCCHHHHHHEEEECCCCCHHHHHHCCCCEEEEEEEEEEECCCEEEEEE
ATSPIDSIQRFIGRVELGMLPSIVDTVIFIDKGLVSKVYSLEMTVKIPAGLKEEDLARPV
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHEEEEEEEECCCCCCHHHHCCCH
VVVKDFITEEPEYEVYVFGEETFVVPLKRRSVEVNKRAMNQLLKVVGKYVPLDQVIVEPR
HHHHHHHCCCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCC
EDVLVIKVPQEYYGLVLSKGLPRIGRIKRRFRVDVRIEPRQ
CCEEEEEECHHHHHHHHHCCCCHHHHHHHHEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]