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The map label for this gene is 159040883

Identifier: 159040883

GI number: 159040883

Start: 335360

End: 336322

Strand: Reverse

Name: 159040883

Synonym: Cmaq_0297

Alternate gene names: NA

Gene position: 336322-335360 (Counterclockwise)

Preceding gene: 159040884

Following gene: 159040882

Centisome position: 16.19

GC content: 44.76

Gene sequence:

>963_bases
ATGGGTTTAAGAAAGGAGAATGATGCTGCTGCAGATTCATCGCAATACGCATACTATACATACGACTATGGAGGCTACAA
CACGTACAGTGGTAACAATTACAGTAACCAGACTTACCCATTCGACATAACCCAGTACTACACGGCGCAAATGCAGTACA
GCATGTACGCTAATAAGGCCCCCACGGGCATAGCTTACTTGGATGCCTTACTCTACGGTGGCCTTAAGAGGGGTGAGGTT
TACCTAGTTGCCGGTGAGGCGGGTTTAGGTAAGACTATATTCAGTCTTAAATTCCTTAAAACTGGAGCCGATATTGGTGA
GTCAGGCATATACATTAGTGTTGATGAACCCAGTGAGGATGTTAAGAGGGGTGCCTATGAGGCCTTGGGCTGGGATCTTG
ACGCCTATGAGAAGCAGAACAGGGTAATAATATATGACTTCAGGACCCATTTCAAGCTATACTCCAAGGAGGGCACTACT
CTTTCACTTGACCCTAAGGATGTGGCTAGGATGATTATTGATGTTATTCAGAAGAATAAGGCTAAGAGGGTTGTGGTTGA
TCCCATAGCGCCATTAATAATAACAGGCCACCAGGATCTCCTATGGGTTAGGGAGTACTTAAGGGAATTGGTGTTTCAAC
TTAAACGCTATAAGGACACCACCACGCTTTTAACATCGGAAATACCCACTGGTGAGGCCACTAAGGTTAGTAGGTTTGGT
GTTGAGGAGTACCTGGCTGGTGGTGTGCTTATTCTTCAATTATTCGAGGAACCCATTACCCACCAGATACTTAGGGTAAT
GTACATTAGGAAGATGAGGTGGATGCCCATATCACCAATGAAGCTTGTTTACGAGATTCAAAGGGGTGAGGGAATAATCA
TAAGGGGTACTTTAACTGATGTGCTTAGGTACGTTCAGCAAAGCATGTACCAGTACAGTTACTACCCATACACAACCCAG
TGA

Upstream 100 bases:

>100_bases
GCAGTGATTAACTAGTGTTCATTAATTAAGCCATTTAATTGCTTAAACTAATGGTGAATTCAAGGTAAAAGTATAAATAT
CCACCTAGGGTTTAGGGCAT

Downstream 100 bases:

>100_bases
TTGATTAATGAGAGACTTAATGGACGCCATAGGCAGCATAATAAGTAGGATCAGGGGCTCAACCTTAATTGATGAGGAAA
CCCTAAGGAGCATACTTAGG

Product: putative circadian clock protein, KaiC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MGLRKENDAAADSSQYAYYTYDYGGYNTYSGNNYSNQTYPFDITQYYTAQMQYSMYANKAPTGIAYLDALLYGGLKRGEV
YLVAGEAGLGKTIFSLKFLKTGADIGESGIYISVDEPSEDVKRGAYEALGWDLDAYEKQNRVIIYDFRTHFKLYSKEGTT
LSLDPKDVARMIIDVIQKNKAKRVVVDPIAPLIITGHQDLLWVREYLRELVFQLKRYKDTTTLLTSEIPTGEATKVSRFG
VEEYLAGGVLILQLFEEPITHQILRVMYIRKMRWMPISPMKLVYEIQRGEGIIIRGTLTDVLRYVQQSMYQYSYYPYTTQ

Sequences:

>Translated_320_residues
MGLRKENDAAADSSQYAYYTYDYGGYNTYSGNNYSNQTYPFDITQYYTAQMQYSMYANKAPTGIAYLDALLYGGLKRGEV
YLVAGEAGLGKTIFSLKFLKTGADIGESGIYISVDEPSEDVKRGAYEALGWDLDAYEKQNRVIIYDFRTHFKLYSKEGTT
LSLDPKDVARMIIDVIQKNKAKRVVVDPIAPLIITGHQDLLWVREYLRELVFQLKRYKDTTTLLTSEIPTGEATKVSRFG
VEEYLAGGVLILQLFEEPITHQILRVMYIRKMRWMPISPMKLVYEIQRGEGIIIRGTLTDVLRYVQQSMYQYSYYPYTTQ
>Mature_319_residues
GLRKENDAAADSSQYAYYTYDYGGYNTYSGNNYSNQTYPFDITQYYTAQMQYSMYANKAPTGIAYLDALLYGGLKRGEVY
LVAGEAGLGKTIFSLKFLKTGADIGESGIYISVDEPSEDVKRGAYEALGWDLDAYEKQNRVIIYDFRTHFKLYSKEGTTL
SLDPKDVARMIIDVIQKNKAKRVVVDPIAPLIITGHQDLLWVREYLRELVFQLKRYKDTTTLLTSEIPTGEATKVSRFGV
EEYLAGGVLILQLFEEPITHQILRVMYIRKMRWMPISPMKLVYEIQRGEGIIIRGTLTDVLRYVQQSMYQYSYYPYTTQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 kaiC domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014774
- InterPro:   IPR020588
- InterPro:   IPR004504
- InterPro:   IPR010624
- InterPro:   IPR022475 [H]

Pfam domain/function: PF06745 KaiC [H]

EC number: NA

Molecular weight: Translated: 36775; Mature: 36644

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: PS51146 KAIC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLRKENDAAADSSQYAYYTYDYGGYNTYSGNNYSNQTYPFDITQYYTAQMQYSMYANKA
CCCCCCCCCCCCCCCEEEEEEECCCEECCCCCCCCCCCCCEEHHHHHHHHHHEEHHCCCC
PTGIAYLDALLYGGLKRGEVYLVAGEAGLGKTIFSLKFLKTGADIGESGIYISVDEPSED
CCHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCHHH
VKRGAYEALGWDLDAYEKQNRVIIYDFRTHFKLYSKEGTTLSLDPKDVARMIIDVIQKNK
HHHHHHHHHCCCCHHHCCCCCEEEEEECCEEEEEECCCCEEEECHHHHHHHHHHHHHCCC
AKRVVVDPIAPLIITGHQDLLWVREYLRELVFQLKRYKDTTTLLTSEIPTGEATKVSRFG
CCEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHEEECCCCCCCCCHHHHHC
VEEYLAGGVLILQLFEEPITHQILRVMYIRKMRWMPISPMKLVYEIQRGEGIIIRGTLTD
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCEEEEECCHHH
VLRYVQQSMYQYSYYPYTTQ
HHHHHHHHHHHEECCCCCCC
>Mature Secondary Structure 
GLRKENDAAADSSQYAYYTYDYGGYNTYSGNNYSNQTYPFDITQYYTAQMQYSMYANKA
CCCCCCCCCCCCCCEEEEEEECCCEECCCCCCCCCCCCCEEHHHHHHHHHHEEHHCCCC
PTGIAYLDALLYGGLKRGEVYLVAGEAGLGKTIFSLKFLKTGADIGESGIYISVDEPSED
CCHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCHHH
VKRGAYEALGWDLDAYEKQNRVIIYDFRTHFKLYSKEGTTLSLDPKDVARMIIDVIQKNK
HHHHHHHHHCCCCHHHCCCCCEEEEEECCEEEEEECCCCEEEECHHHHHHHHHHHHHCCC
AKRVVVDPIAPLIITGHQDLLWVREYLRELVFQLKRYKDTTTLLTSEIPTGEATKVSRFG
CCEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHEEECCCCCCCCCHHHHHC
VEEYLAGGVLILQLFEEPITHQILRVMYIRKMRWMPISPMKLVYEIQRGEGIIIRGTLTD
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCEEEEECCHHH
VLRYVQQSMYQYSYYPYTTQ
HHHHHHHHHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]