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The map label for this gene is 159040873

Identifier: 159040873

GI number: 159040873

Start: 326711

End: 327334

Strand: Reverse

Name: 159040873

Synonym: Cmaq_0287

Alternate gene names: NA

Gene position: 327334-326711 (Counterclockwise)

Preceding gene: 159040874

Following gene: 159040872

Centisome position: 15.76

GC content: 41.19

Gene sequence:

>624_bases
ATGATTAAGGTTTTGATTAAAGCTTACCGCAATGATTGCCTTGTTCAGAATACGTTAAGTAAGCTTAACTTGGGCTTCGA
TGTGTTAATGATAAATATTAGTGATGGTAAATCAACTCATTTAATAAGCACTAATAGGCCCTTAACACGTCATGAACTTG
ATTTACTAAGGGAATCTGGATTAAGGATGCGTAAGGTTAACGAGAACGTAATGTGGATTGAGTCTCCAAGCTGTTCCTCA
TGCAGGGTACTGGGTCATGGTGGCTTTATGGTAATTGAGGGTAAATCCCTAGATTCCAATACCGTAATCTACGGTATCCT
ACTGCCGTCAAGGGGTTACTTAAGAAGCCTCATGAAGGATTTCCTGAATGAAAGTGTCAAGGCTGAAGTAGTGTATGCTC
AGGCTATTAAGGTTAAGACACTAACCAGTAGGCAACTTGAGGTTCTTCAATTGGCCTACAGTAGGGGGTTGTTTGATGAT
AAGAGACGCGTAAGCATTAGTGAGCTTGCTAAGGAATTGGGCATATCCCCGGCTACGTTAACAGTATTGATAAGGAGGGG
TATTAAGAAGGTTCTTGAGGATTACTTTAGGCACACGTTAAGTGAGACCGGGTCCCATAGTTAA

Upstream 100 bases:

>100_bases
CAGGTTATTGAGAAGCTTAAGGTAAAGTATTTAAGCATTGATTAAGAGATTTATGGGAATAAATTTATAGGTAAAATATA
GGTAATTAGAGTGATGCTTT

Downstream 100 bases:

>100_bases
GTTAAATTACGTGAATCATAATTGGCATGGGTCATTATCTAAAATCTTAGATAATTAGCTTAACTGAGGGTAGTGGGAAG
TAAGCCGTAGGTGGGAGTAT

Product: bacterio-opsin activator

Products: NA

Alternate protein names: Bacterio-Opsin Activator; Bacterio-Opsin Activator HTH Domain-Containing Protein

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MIKVLIKAYRNDCLVQNTLSKLNLGFDVLMINISDGKSTHLISTNRPLTRHELDLLRESGLRMRKVNENVMWIESPSCSS
CRVLGHGGFMVIEGKSLDSNTVIYGILLPSRGYLRSLMKDFLNESVKAEVVYAQAIKVKTLTSRQLEVLQLAYSRGLFDD
KRRVSISELAKELGISPATLTVLIRRGIKKVLEDYFRHTLSETGSHS

Sequences:

>Translated_207_residues
MIKVLIKAYRNDCLVQNTLSKLNLGFDVLMINISDGKSTHLISTNRPLTRHELDLLRESGLRMRKVNENVMWIESPSCSS
CRVLGHGGFMVIEGKSLDSNTVIYGILLPSRGYLRSLMKDFLNESVKAEVVYAQAIKVKTLTSRQLEVLQLAYSRGLFDD
KRRVSISELAKELGISPATLTVLIRRGIKKVLEDYFRHTLSETGSHS
>Mature_207_residues
MIKVLIKAYRNDCLVQNTLSKLNLGFDVLMINISDGKSTHLISTNRPLTRHELDLLRESGLRMRKVNENVMWIESPSCSS
CRVLGHGGFMVIEGKSLDSNTVIYGILLPSRGYLRSLMKDFLNESVKAEVVYAQAIKVKTLTSRQLEVLQLAYSRGLFDD
KRRVSISELAKELGISPATLTVLIRRGIKKVLEDYFRHTLSETGSHS

Specific function: Unknown

COG id: COG3413

COG function: function code R; Predicted DNA binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23341; Mature: 23341

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKVLIKAYRNDCLVQNTLSKLNLGFDVLMINISDGKSTHLISTNRPLTRHELDLLRESG
CHHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHCC
LRMRKVNENVMWIESPSCSSCRVLGHGGFMVIEGKSLDSNTVIYGILLPSRGYLRSLMKD
CEEEECCCCEEEEECCCCCCEEEEECCCEEEEECCCCCCCEEEEEEEECCCHHHHHHHHH
FLNESVKAEVVYAQAIKVKTLTSRQLEVLQLAYSRGLFDDKRRVSISELAKELGISPATL
HHCCCHHHEEEEEHHEEEEHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHCCCHHHH
TVLIRRGIKKVLEDYFRHTLSETGSHS
HHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIKVLIKAYRNDCLVQNTLSKLNLGFDVLMINISDGKSTHLISTNRPLTRHELDLLRESG
CHHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHCC
LRMRKVNENVMWIESPSCSSCRVLGHGGFMVIEGKSLDSNTVIYGILLPSRGYLRSLMKD
CEEEECCCCEEEEECCCCCCEEEEECCCEEEEECCCCCCCEEEEEEEECCCHHHHHHHHH
FLNESVKAEVVYAQAIKVKTLTSRQLEVLQLAYSRGLFDDKRRVSISELAKELGISPATL
HHCCCHHHEEEEEHHEEEEHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHCCCHHHH
TVLIRRGIKKVLEDYFRHTLSETGSHS
HHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA