Click here to switch to the map view.

The map label for this gene is 159040854

Identifier: 159040854

GI number: 159040854

Start: 306021

End: 306848

Strand: Reverse

Name: 159040854

Synonym: Cmaq_0268

Alternate gene names: NA

Gene position: 306848-306021 (Counterclockwise)

Preceding gene: 159040863

Following gene: 159040853

Centisome position: 14.77

GC content: 41.18

Gene sequence:

>828_bases
ATGAATATTAGTATTGCAATACCGTACAATGTAACTGAGGAATCCACCACGGAGGAGGAGGCTGTTAGGAAGATAGGCTA
CATAGGTAGGGCGGCGGCAATATTTAGGGTTAGGAGCATATTAATCTACACCTTTAAGGGTGATGAACCTTTAAGGAAAG
CATCATTCATAAAGAAGAACCTGGAGTACCTAGTGACTCCACCGTATTTAAGGAAGGACTTATTTGGAATAGACCCTGAC
CTAAGGCTTGCTGGGTTACTTCAACCATTAACACTACCAGTGTTTGGTCATAGGAAATCTAACCCAAGGACAGGGGACGT
GAGGATTGGCTTAGTGATTAGGTGGGAGGGGTATTACTCAATAGTTAAGGTGGGTGAGGATACTTACGTTAAGGTACCTA
AACCATACCCAATTAAGTCAATGCTACTGGTTTCAATAGACTCAATGATTAGTAATAGGTTTTACAGGGGACATGTGGTG
AAGAGTAGTAAGGTGTATGCAGGCTACAGTGCTAATATAATTGAATTAAGGGACTTAGTTAAATTAAGGAACCTAATACT
CACAGGTAAGGAGGGGAACAGTGTTATTAATGAGATTAATAAACTAAGGGCGCTTAAGGATGAGGATGTTGTAGTCGTCT
TCGGATCCCCACGCATGGGTGTTGACGACATACTTAAGGGTGAGGGATTAGGGGATGTGCTTAATTCATCATTATTCGTG
AACTTCGTGCCTAATCAAGGGCTTGTAACCATAAGGACTGAGGAGGCTATAATAGCGGTTTTATCAATACTTAACATTAT
TAACGCCATTTCAAGCGAAGGTAAATGA

Upstream 100 bases:

>100_bases
CATTACTAACTGGTTTAGTTAAGGGATTTAAGCATTAGCCGCAGGCCAACCTTAAAAGGCACGGTAACGGACAAAAGCAT
TAAAGCAGTGGTGGTGATTA

Downstream 100 bases:

>100_bases
AGTAGATAGCCATATAACATGCATTTAATTCATTACTTAGTGATGAAGTCAGTATTAAAAGCATTGTAGTTGAGCTTTAC
TTTATGGGTAAAGTAATAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MNISIAIPYNVTEESTTEEEAVRKIGYIGRAAAIFRVRSILIYTFKGDEPLRKASFIKKNLEYLVTPPYLRKDLFGIDPD
LRLAGLLQPLTLPVFGHRKSNPRTGDVRIGLVIRWEGYYSIVKVGEDTYVKVPKPYPIKSMLLVSIDSMISNRFYRGHVV
KSSKVYAGYSANIIELRDLVKLRNLILTGKEGNSVINEINKLRALKDEDVVVVFGSPRMGVDDILKGEGLGDVLNSSLFV
NFVPNQGLVTIRTEEAIIAVLSILNIINAISSEGK

Sequences:

>Translated_275_residues
MNISIAIPYNVTEESTTEEEAVRKIGYIGRAAAIFRVRSILIYTFKGDEPLRKASFIKKNLEYLVTPPYLRKDLFGIDPD
LRLAGLLQPLTLPVFGHRKSNPRTGDVRIGLVIRWEGYYSIVKVGEDTYVKVPKPYPIKSMLLVSIDSMISNRFYRGHVV
KSSKVYAGYSANIIELRDLVKLRNLILTGKEGNSVINEINKLRALKDEDVVVVFGSPRMGVDDILKGEGLGDVLNSSLFV
NFVPNQGLVTIRTEEAIIAVLSILNIINAISSEGK
>Mature_275_residues
MNISIAIPYNVTEESTTEEEAVRKIGYIGRAAAIFRVRSILIYTFKGDEPLRKASFIKKNLEYLVTPPYLRKDLFGIDPD
LRLAGLLQPLTLPVFGHRKSNPRTGDVRIGLVIRWEGYYSIVKVGEDTYVKVPKPYPIKSMLLVSIDSMISNRFYRGHVV
KSSKVYAGYSANIIELRDLVKLRNLILTGKEGNSVINEINKLRALKDEDVVVVFGSPRMGVDDILKGEGLGDVLNSSLFV
NFVPNQGLVTIRTEEAIIAVLSILNIINAISSEGK

Specific function: Unknown

COG id: COG2106

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI38679912, Length=301, Percent_Identity=27.2425249169435, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17551846, Length=320, Percent_Identity=26.875, Blast_Score=67, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003750 [H]

Pfam domain/function: PF02598 DUF171 [H]

EC number: NA

Molecular weight: Translated: 30670; Mature: 30670

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNISIAIPYNVTEESTTEEEAVRKIGYIGRAAAIFRVRSILIYTFKGDEPLRKASFIKKN
CCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHC
LEYLVTPPYLRKDLFGIDPDLRLAGLLQPLTLPVFGHRKSNPRTGDVRIGLVIRWEGYYS
CCEEECCHHHHHHHCCCCCCCHHHHHHHHHCCCEECCCCCCCCCCCEEEEEEEEECCEEE
IVKVGEDTYVKVPKPYPIKSMLLVSIDSMISNRFYRGHVVKSSKVYAGYSANIIELRDLV
EEEECCCCEEECCCCCCHHHHHHHHHHHHHHCCEEECEEEECCEEEECCCCCHHHHHHHH
KLRNLILTGKEGNSVINEINKLRALKDEDVVVVFGSPRMGVDDILKGEGLGDVLNSSLFV
HHHHHEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHCCCCCHHHHCCCEEE
NFVPNQGLVTIRTEEAIIAVLSILNIINAISSEGK
EECCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNISIAIPYNVTEESTTEEEAVRKIGYIGRAAAIFRVRSILIYTFKGDEPLRKASFIKKN
CCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHC
LEYLVTPPYLRKDLFGIDPDLRLAGLLQPLTLPVFGHRKSNPRTGDVRIGLVIRWEGYYS
CCEEECCHHHHHHHCCCCCCCHHHHHHHHHCCCEECCCCCCCCCCCEEEEEEEEECCEEE
IVKVGEDTYVKVPKPYPIKSMLLVSIDSMISNRFYRGHVVKSSKVYAGYSANIIELRDLV
EEEECCCCEEECCCCCCHHHHHHHHHHHHHHCCEEECEEEECCEEEECCCCCHHHHHHHH
KLRNLILTGKEGNSVINEINKLRALKDEDVVVVFGSPRMGVDDILKGEGLGDVLNSSLFV
HHHHHEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHCCCCCHHHHCCCEEE
NFVPNQGLVTIRTEEAIIAVLSILNIINAISSEGK
EECCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2406244 [H]