| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159040809
Identifier: 159040809
GI number: 159040809
Start: 256930
End: 257913
Strand: Reverse
Name: 159040809
Synonym: Cmaq_0222
Alternate gene names: NA
Gene position: 257913-256930 (Counterclockwise)
Preceding gene: 159040815
Following gene: 159040808
Centisome position: 12.41
GC content: 39.53
Gene sequence:
>984_bases ATGGGTCTTAGTCCTGAGGAGGTGAGGAGGTTTTTGAGGGCTTTGGATGAGGATGAGGAGTTTAGGCTTGCTGTTGCTGC TAAGCTTGGTATTAGTGATGTTAAGGCTTCTATTGATAGGCTTACTGAGATTGTTGGTGGTGTTGTTAATGTCACTAACT CAATGCTTAATATACTTAAGGACTCATTAAGTAAGCAGGATAAGGTACTGGAGGAGTTGAAGGCATTGAGGGAGGGTGAG AATAGGCTCTGGGAGGAGGTTAAAGCATTAAGAGAAGGACAGAATAAACTATGGGAGGAGGTTAAGGCTTTGAGGGAGGT GGAGCAGAGGCATGAGGAGGAATTAAAGGCATTAAGGGAAGAGAATAATAAAATATGGGAAGAGATCAAAGCAATAAAAG AGGAGAATAATAAAATATGGCAAGAAATAAAGGCGTTAAGAGAAGTGGAACAAAGGCATGAGGAGGAATTAAAGGCATTA CATGAAGGACAAAATAAGCTTTGGGAGGAAGTTAAGGCTTTAAGGGAGGGACAGAATAAGCTTTGGGAGGAGAATAATAA AATATGGCAGGAAATAAGAAGAATGAGGAAAGATATTAATGATATTAAGAGGACCCTAGATAATTTAACATCATCCATTG AGGAGGAGGCTAATGATGTAGTAATGCATTTACTTAAGGGTAAGGGTATTGAACTAAGTACTGATAGGATTATCTTTAAC TCTAGGTTTGAGTTCGATGTTTATGGGACTAATAATCAAGTAACTATTATTGGTGAAGCTAAGACTAGGGTTGGACCTAG GTTAATCGCTAGAATAGATGAAAAGATAAGTAAGGCGATTAGTATGTTTCCAGGTAAATTCCCAGGCAAGGTAGTTAAGG TAGTTTATTGTTTAAGGGCAATGCCTGGTGCTATGGAGGAGTCTGAGAGGAGGGGGATTTGGTTAATTGAAAGCATGAAG GAGAGGACTAAGTCACCCCTTTGA
Upstream 100 bases:
>100_bases TAGTTACTAGCATGCTTCAGTCACCATATTGAGTGGTATTATTAATCCTACAACTAGGTTTGCGTAAGGTTTATTAGTTT AGTTTACTTTTTTGGTTGGG
Downstream 100 bases:
>100_bases TCTTAAGGGAACCATTAGCCAACTCTAGTGTTAGTCAACACGTAGTGGCTTTAGTTAAAGTTTATTAACCAAGCTACTGA ATTTAATGAGTATTTACTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MGLSPEEVRRFLRALDEDEEFRLAVAAKLGISDVKASIDRLTEIVGGVVNVTNSMLNILKDSLSKQDKVLEELKALREGE NRLWEEVKALREGQNKLWEEVKALREVEQRHEEELKALREENNKIWEEIKAIKEENNKIWQEIKALREVEQRHEEELKAL HEGQNKLWEEVKALREGQNKLWEENNKIWQEIRRMRKDINDIKRTLDNLTSSIEEEANDVVMHLLKGKGIELSTDRIIFN SRFEFDVYGTNNQVTIIGEAKTRVGPRLIARIDEKISKAISMFPGKFPGKVVKVVYCLRAMPGAMEESERRGIWLIESMK ERTKSPL
Sequences:
>Translated_327_residues MGLSPEEVRRFLRALDEDEEFRLAVAAKLGISDVKASIDRLTEIVGGVVNVTNSMLNILKDSLSKQDKVLEELKALREGE NRLWEEVKALREGQNKLWEEVKALREVEQRHEEELKALREENNKIWEEIKAIKEENNKIWQEIKALREVEQRHEEELKAL HEGQNKLWEEVKALREGQNKLWEENNKIWQEIRRMRKDINDIKRTLDNLTSSIEEEANDVVMHLLKGKGIELSTDRIIFN SRFEFDVYGTNNQVTIIGEAKTRVGPRLIARIDEKISKAISMFPGKFPGKVVKVVYCLRAMPGAMEESERRGIWLIESMK ERTKSPL >Mature_326_residues GLSPEEVRRFLRALDEDEEFRLAVAAKLGISDVKASIDRLTEIVGGVVNVTNSMLNILKDSLSKQDKVLEELKALREGEN RLWEEVKALREGQNKLWEEVKALREVEQRHEEELKALREENNKIWEEIKAIKEENNKIWQEIKALREVEQRHEEELKALH EGQNKLWEEVKALREGQNKLWEENNKIWQEIRRMRKDINDIKRTLDNLTSSIEEEANDVVMHLLKGKGIELSTDRIIFNS RFEFDVYGTNNQVTIIGEAKTRVGPRLIARIDEKISKAISMFPGKFPGKVVKVVYCLRAMPGAMEESERRGIWLIESMKE RTKSPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38150; Mature: 38019
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLSPEEVRRFLRALDEDEEFRLAVAAKLGISDVKASIDRLTEIVGGVVNVTNSMLNILK CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSLSKQDKVLEELKALREGENRLWEEVKALREGQNKLWEEVKALREVEQRHEEELKALRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENNKIWEEIKAIKEENNKIWQEIKALREVEQRHEEELKALHEGQNKLWEEVKALREGQNK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWEENNKIWQEIRRMRKDINDIKRTLDNLTSSIEEEANDVVMHLLKGKGIELSTDRIIFN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEC SRFEFDVYGTNNQVTIIGEAKTRVGPRLIARIDEKISKAISMFPGKFPGKVVKVVYCLRA CCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH MPGAMEESERRGIWLIESMKERTKSPL CCCCCCHHHCCCHHHHHHHHHHCCCCC >Mature Secondary Structure GLSPEEVRRFLRALDEDEEFRLAVAAKLGISDVKASIDRLTEIVGGVVNVTNSMLNILK CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSLSKQDKVLEELKALREGENRLWEEVKALREGQNKLWEEVKALREVEQRHEEELKALRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENNKIWEEIKAIKEENNKIWQEIKALREVEQRHEEELKALHEGQNKLWEEVKALREGQNK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWEENNKIWQEIRRMRKDINDIKRTLDNLTSSIEEEANDVVMHLLKGKGIELSTDRIIFN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEC SRFEFDVYGTNNQVTIIGEAKTRVGPRLIARIDEKISKAISMFPGKFPGKVVKVVYCLRA CCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH MPGAMEESERRGIWLIESMKERTKSPL CCCCCCHHHCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA