| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159040803
Identifier: 159040803
GI number: 159040803
Start: 251906
End: 252925
Strand: Reverse
Name: 159040803
Synonym: Cmaq_0216
Alternate gene names: NA
Gene position: 252925-251906 (Counterclockwise)
Preceding gene: 159040804
Following gene: 159040802
Centisome position: 12.17
GC content: 43.43
Gene sequence:
>1020_bases ATGCTAGGCCATGCCACTGAGAAGCTGACGCCAGCCTCATACGGTAGGTTGTTTAAGTACCAGGTTAGGGTATCTCAGGC AGTATTAATAGTATCATTAATTCTCCTAGTCACTGGGCCAGTATTATCTGTGAATTACACTGGGATTCATGGTAGGATAA TGATTAGTGGCTTGGTTTTATTCTACCTAAGCGTAATGTATAGTCAACACACTGGGTTCACTAGGTTCATGCCTTCACGC CTAGTTTCATTAGTCATAGGGATCTTAGCTGTATCCTGGTCCTTAGCGTACATTCTTAATCAGTGGGCTTGGAGGATACT ATTAATTGCCTGGGTTTTACTATACGTATTAGTCTTCGTTGAGAGGGGGCTTGGTAAAATACCTTTGTTTTACCCAAATG CATTCACTGTGATTGGTCTATTATCAGCTTTAACAGTAATATTGACTAATAATCCCTTATCCCTATTAGGCTTCCCCCTC TCCTCACTAACCAGTTTAATGAGGAGGGTGGAGGATAGGCGTAGGCCAAGTTACCTTGACTTGGGTTTTTTCACAATGCC TATTCTAATGTACTTCATAAACCACTCCTACTCAGTTGCTTTACTTGCACTCTTTGGGTTAATGACGCTTGGGATCCCGT CATCATTACCTAAGCGAACCGGTCTCTCCGTGGCATACCCAGTGGGGGCTGTGTTGGGTAGGTTTGGTTTAGCTGTGTCA TTGGCTGTCTCAATCTATGCTACGCCTCTTGATGCACTGCACATGGTGTTGATAGGTTATATTGCAGTAATGATGTCTTC ACTATGCATCCCCATGCTTATACCCGGTTACCTCTGGCTATGGCCCAGGGGGTATGGTTTCGAAATACCAGTACTGATTG AGGGGGCTGCGTTACTTAGGTTAATTTACCCATATACTGGTTCCTGGGTGATTTACGTATCATTAGTACTCCTGTATGCT GCCTTTATTGATATATTGATTCACTACGCTGCAGGTAGGAGGATTCATGTTGAGATTTAG
Upstream 100 bases:
>100_bases AGTCTGGGGCATGGCTTATTCACCGCTTCATAATCAGGAGTGTTCATCACTGGGGGCAACTTAAGTAATTCTTAATAAAG TTTAACCTAAGGATGAATCA
Downstream 100 bases:
>100_bases AGAAAGATTTAAATAGAATAAGGTAGAGTATTCTTAGTTTGAGTCCATTTTTAAAGACAATATCTTATTCCTTTAGCATA TAGTGTAGATAAACCAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MLGHATEKLTPASYGRLFKYQVRVSQAVLIVSLILLVTGPVLSVNYTGIHGRIMISGLVLFYLSVMYSQHTGFTRFMPSR LVSLVIGILAVSWSLAYILNQWAWRILLIAWVLLYVLVFVERGLGKIPLFYPNAFTVIGLLSALTVILTNNPLSLLGFPL SSLTSLMRRVEDRRRPSYLDLGFFTMPILMYFINHSYSVALLALFGLMTLGIPSSLPKRTGLSVAYPVGAVLGRFGLAVS LAVSIYATPLDALHMVLIGYIAVMMSSLCIPMLIPGYLWLWPRGYGFEIPVLIEGAALLRLIYPYTGSWVIYVSLVLLYA AFIDILIHYAAGRRIHVEI
Sequences:
>Translated_339_residues MLGHATEKLTPASYGRLFKYQVRVSQAVLIVSLILLVTGPVLSVNYTGIHGRIMISGLVLFYLSVMYSQHTGFTRFMPSR LVSLVIGILAVSWSLAYILNQWAWRILLIAWVLLYVLVFVERGLGKIPLFYPNAFTVIGLLSALTVILTNNPLSLLGFPL SSLTSLMRRVEDRRRPSYLDLGFFTMPILMYFINHSYSVALLALFGLMTLGIPSSLPKRTGLSVAYPVGAVLGRFGLAVS LAVSIYATPLDALHMVLIGYIAVMMSSLCIPMLIPGYLWLWPRGYGFEIPVLIEGAALLRLIYPYTGSWVIYVSLVLLYA AFIDILIHYAAGRRIHVEI >Mature_339_residues MLGHATEKLTPASYGRLFKYQVRVSQAVLIVSLILLVTGPVLSVNYTGIHGRIMISGLVLFYLSVMYSQHTGFTRFMPSR LVSLVIGILAVSWSLAYILNQWAWRILLIAWVLLYVLVFVERGLGKIPLFYPNAFTVIGLLSALTVILTNNPLSLLGFPL SSLTSLMRRVEDRRRPSYLDLGFFTMPILMYFINHSYSVALLALFGLMTLGIPSSLPKRTGLSVAYPVGAVLGRFGLAVS LAVSIYATPLDALHMVLIGYIAVMMSSLCIPMLIPGYLWLWPRGYGFEIPVLIEGAALLRLIYPYTGSWVIYVSLVLLYA AFIDILIHYAAGRRIHVEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37712; Mature: 37712
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGHATEKLTPASYGRLFKYQVRVSQAVLIVSLILLVTGPVLSVNYTGIHGRIMISGLVL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHH FYLSVMYSQHTGFTRFMPSRLVSLVIGILAVSWSLAYILNQWAWRILLIAWVLLYVLVFV HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERGLGKIPLFYPNAFTVIGLLSALTVILTNNPLSLLGFPLSSLTSLMRRVEDRRRPSYLD HCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHCCCCEEC LGFFTMPILMYFINHSYSVALLALFGLMTLGIPSSLPKRTGLSVAYPVGAVLGRFGLAVS HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LAVSIYATPLDALHMVLIGYIAVMMSSLCIPMLIPGYLWLWPRGYGFEIPVLIEGAALLR HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHEECHHHHHH LIYPYTGSWVIYVSLVLLYAAFIDILIHYAAGRRIHVEI HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC >Mature Secondary Structure MLGHATEKLTPASYGRLFKYQVRVSQAVLIVSLILLVTGPVLSVNYTGIHGRIMISGLVL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHH FYLSVMYSQHTGFTRFMPSRLVSLVIGILAVSWSLAYILNQWAWRILLIAWVLLYVLVFV HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERGLGKIPLFYPNAFTVIGLLSALTVILTNNPLSLLGFPLSSLTSLMRRVEDRRRPSYLD HCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHCCCCEEC LGFFTMPILMYFINHSYSVALLALFGLMTLGIPSSLPKRTGLSVAYPVGAVLGRFGLAVS HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LAVSIYATPLDALHMVLIGYIAVMMSSLCIPMLIPGYLWLWPRGYGFEIPVLIEGAALLR HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHEECHHHHHH LIYPYTGSWVIYVSLVLLYAAFIDILIHYAAGRRIHVEI HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA