| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159040775
Identifier: 159040775
GI number: 159040775
Start: 225213
End: 225446
Strand: Reverse
Name: 159040775
Synonym: Cmaq_0188
Alternate gene names: NA
Gene position: 225446-225213 (Counterclockwise)
Preceding gene: 159040776
Following gene: 159040770
Centisome position: 10.85
GC content: 42.31
Gene sequence:
>234_bases ATGGGTGTGGCTGGACCCGAGGAGAGGATACTGCTTGCGTTATTCATGCAATCCGCGGTTAGTGAAGGTAAGGCCATAAG CGTGAGCGCGTTAGCTAAGATAATTAATAGTGAGGTAAGCTTAGTGAGTAATGTCTTAAAGTCACTTGTTGACCAGGGTT ACGTGGCTTTAAAGGATAATAACGTTTTCTTAACCAATAAGGGATTAATGAGGGTTTTAAGTAGATTCTCGTGA
Upstream 100 bases:
>100_bases ACCACCGGAATAAGGCCCCCTCGTTAATTTCACCTGGCTTAATCCCTGAGGGTAACGAATTGATTAAACAGTTATAAAGG GGGTTTAAGGGGAATTAGGC
Downstream 100 bases:
>100_bases AGTGAGCCTTCACTTACTCTTCCTTTTAGTGAGGGGGTAAGTGGGTATTGGACCCTTCAATCCAGCTAATTCCCATCTAT CATTTATTACTACTGCAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MGVAGPEERILLALFMQSAVSEGKAISVSALAKIINSEVSLVSNVLKSLVDQGYVALKDNNVFLTNKGLMRVLSRFS
Sequences:
>Translated_77_residues MGVAGPEERILLALFMQSAVSEGKAISVSALAKIINSEVSLVSNVLKSLVDQGYVALKDNNVFLTNKGLMRVLSRFS >Mature_76_residues GVAGPEERILLALFMQSAVSEGKAISVSALAKIINSEVSLVSNVLKSLVDQGYVALKDNNVFLTNKGLMRVLSRFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8240; Mature: 8109
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVAGPEERILLALFMQSAVSEGKAISVSALAKIINSEVSLVSNVLKSLVDQGYVALKDN CCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC NVFLTNKGLMRVLSRFS CEEEECHHHHHHHHHCC >Mature Secondary Structure GVAGPEERILLALFMQSAVSEGKAISVSALAKIINSEVSLVSNVLKSLVDQGYVALKDN CCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC NVFLTNKGLMRVLSRFS CEEEECHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA