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The map label for this gene is 159040756

Identifier: 159040756

GI number: 159040756

Start: 198613

End: 199971

Strand: Reverse

Name: 159040756

Synonym: Cmaq_0169

Alternate gene names: NA

Gene position: 199971-198613 (Counterclockwise)

Preceding gene: 159040759

Following gene: 159040753

Centisome position: 9.63

GC content: 44.81

Gene sequence:

>1359_bases
ATGGGTGCATTAACAATATCAGCCAAGTACCTAATAGAACTTGGCTTCGAGGTACAAGGCACCGTGGATAAACCAGACAT
AATAGGTGCCTTATTCAGTCAAACAGAGGGTCTACTGGGCTCTGACTTGGATTTAAGGGAGCTTCAAAACACCAGTAGGA
TTGGTAGGATTGAGGTTGAGGTTGAGCATAGGGGTGATAAAACGGTGGGTAAGGTTTACGTGCCATCAAACCTGGATCAC
TATGAGACTGCTTTAATAGCTGCAATGCTTGAGACTGTTGATAGGGTTGGTCCATATAACGCCAAGTTCCAGGTTAATTC
AATTAAGGACTTGAGGAGTGAGAAGCGTAAATTAATAATAGATAGGGCTAAGGAGTTGATTAAGCTCATTGAGAGGGAGA
CCATACCTGATACTAAGGAGCTTATGGATAAGTTCCTCGGTGAGGTTAAGCAGGGTGAGGTTGTATCATATGGTCCAGAG
GGCTTACCTGCTGGGCCTGATGTAGAATCCTCTGATACAGTAATAATCGTTGAGGGTAGGGCTGATGTAGTTAACTTAAT
TAAGCATGGTTATAGGAATGTAATAGCCATAGAGGGGGCTAGCGGTGGTATACCTAAGACTGTTATTGAGTTAAGCCGCA
GGAAGACTACAATAGCCTTCACTGATGGTGATAGGGGTGGTGAAATGATATTAAGGGAGCTGCTTAAGGTGGCTGACATA
GATTACATAGCCAGGGCTCCACCAGGTAAGGAGGTTGAGCAGTTGACGGCTAAGGAGATTGCCAAGGCCCTCAGGAATAA
GATACCTGTTGAGGAGTATATTAACCAGTTAAGTAAGAAGGATAGGCAAATAATTGAGGAGAGTAAGAAGCAGATTGAGC
AGGCTCAAGTCCAACCATCAGCGGCACCAACATCCCCCCAGCCTCAGCCTGAATCAACGCAACCCACGCAGCCTATTCAA
CAGGTCCAGGTTACGCAGCAGACGCAGGTCATTGAGGTTCCTGCCCAAACTCAGGGTCAGGTTCAAGTAACTACCATGCA
GCAATCCACTCAGCAGACTCCCCAACTACCCACCAGTGTTGTTGATGAGATTAATAAACTATCAGGTACACTGGAGGCTA
TAATATATGATAAGAACTGGACGGTGTTGAAGAGGGTTCCAGTTAGGGATCTGCTTGATACCCTTCAGCAGGTTAACGAT
GCGTACGCCATTGTTTTCGACGGGGTAGGCACCCAGAGGCTTGTTGATGCTGCAGTTGGTAAGGGTATTAAGATGCTTAT
AATGACTAGGATAGGTAATATTGCTAAGGTACCGTCTGATATGGTTATTTTAACGTTCAATGATATTATTAATAAGTAA

Upstream 100 bases:

>100_bases
CTCACGCACTACTATGTACTAGTCATTGAACCTAATATCTTATTATTACTAGAAACGTTAATAAGGTAGCTACTCATGTG
GTTGCTATTGGGTGGTGTTA

Downstream 100 bases:

>100_bases
CCTAATTTTAAAACCAATATTTAAAACAATAGTGAATTAGCAGGTGTTTTAACCATTTCAAGTACCTTAACCTTAAGGTC
CCTTACAATATTCAACGTAT

Product: DNA primase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 451

Protein sequence:

>452_residues
MGALTISAKYLIELGFEVQGTVDKPDIIGALFSQTEGLLGSDLDLRELQNTSRIGRIEVEVEHRGDKTVGKVYVPSNLDH
YETALIAAMLETVDRVGPYNAKFQVNSIKDLRSEKRKLIIDRAKELIKLIERETIPDTKELMDKFLGEVKQGEVVSYGPE
GLPAGPDVESSDTVIIVEGRADVVNLIKHGYRNVIAIEGASGGIPKTVIELSRRKTTIAFTDGDRGGEMILRELLKVADI
DYIARAPPGKEVEQLTAKEIAKALRNKIPVEEYINQLSKKDRQIIEESKKQIEQAQVQPSAAPTSPQPQPESTQPTQPIQ
QVQVTQQTQVIEVPAQTQGQVQVTTMQQSTQQTPQLPTSVVDEINKLSGTLEAIIYDKNWTVLKRVPVRDLLDTLQQVND
AYAIVFDGVGTQRLVDAAVGKGIKMLIMTRIGNIAKVPSDMVILTFNDIINK

Sequences:

>Translated_452_residues
MGALTISAKYLIELGFEVQGTVDKPDIIGALFSQTEGLLGSDLDLRELQNTSRIGRIEVEVEHRGDKTVGKVYVPSNLDH
YETALIAAMLETVDRVGPYNAKFQVNSIKDLRSEKRKLIIDRAKELIKLIERETIPDTKELMDKFLGEVKQGEVVSYGPE
GLPAGPDVESSDTVIIVEGRADVVNLIKHGYRNVIAIEGASGGIPKTVIELSRRKTTIAFTDGDRGGEMILRELLKVADI
DYIARAPPGKEVEQLTAKEIAKALRNKIPVEEYINQLSKKDRQIIEESKKQIEQAQVQPSAAPTSPQPQPESTQPTQPIQ
QVQVTQQTQVIEVPAQTQGQVQVTTMQQSTQQTPQLPTSVVDEINKLSGTLEAIIYDKNWTVLKRVPVRDLLDTLQQVND
AYAIVFDGVGTQRLVDAAVGKGIKMLIMTRIGNIAKVPSDMVILTFNDIINK
>Mature_451_residues
GALTISAKYLIELGFEVQGTVDKPDIIGALFSQTEGLLGSDLDLRELQNTSRIGRIEVEVEHRGDKTVGKVYVPSNLDHY
ETALIAAMLETVDRVGPYNAKFQVNSIKDLRSEKRKLIIDRAKELIKLIERETIPDTKELMDKFLGEVKQGEVVSYGPEG
LPAGPDVESSDTVIIVEGRADVVNLIKHGYRNVIAIEGASGGIPKTVIELSRRKTTIAFTDGDRGGEMILRELLKVADID
YIARAPPGKEVEQLTAKEIAKALRNKIPVEEYINQLSKKDRQIIEESKKQIEQAQVQPSAAPTSPQPQPESTQPTQPIQQ
VQVTQQTQVIEVPAQTQGQVQVTTMQQSTQQTPQLPTSVVDEINKLSGTLEAIIYDKNWTVLKRVPVRDLLDTLQQVNDA
YAIVFDGVGTQRLVDAAVGKGIKMLIMTRIGNIAKVPSDMVILTFNDIINK

Specific function: Unknown

COG id: COG0358

COG function: function code L; DNA primase (bacterial type)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0095 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y169_CALMQ (A8MA86)

Other databases:

- EMBL:   CP000852
- RefSeq:   YP_001540008.1
- ProteinModelPortal:   A8MA86
- SMR:   A8MA86
- GeneID:   5709737
- GenomeReviews:   CP000852_GR
- KEGG:   cma:Cmaq_0169
- HOGENOM:   HBG541216
- OMA:   GYRNVIA
- ProtClustDB:   PRK04031
- BioCyc:   CMAQ397948:CMAQ_0169-MONOMER
- HAMAP:   MF_00007
- InterPro:   IPR006171
- InterPro:   IPR020607
- SMART:   SM00493

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49905; Mature: 49774

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGALTISAKYLIELGFEVQGTVDKPDIIGALFSQTEGLLGSDLDLRELQNTSRIGRIEVE
CCCEEEEHHHHEEECCEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCEEEEE
VEHRGDKTVGKVYVPSNLDHYETALIAAMLETVDRVGPYNAKFQVNSIKDLRSEKRKLII
EECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHH
DRAKELIKLIERETIPDTKELMDKFLGEVKQGEVVSYGPEGLPAGPDVESSDTVIIVEGR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEEEEECC
ADVVNLIKHGYRNVIAIEGASGGIPKTVIELSRRKTTIAFTDGDRGGEMILRELLKVADI
HHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCC
DYIARAPPGKEVEQLTAKEIAKALRNKIPVEEYINQLSKKDRQIIEESKKQIEQAQVQPS
HHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AAPTSPQPQPESTQPTQPIQQVQVTQQTQVIEVPAQTQGQVQVTTMQQSTQQTPQLPTSV
CCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCCCCCEEEEEEHHHHCCCCCCCHHH
VDEINKLSGTLEAIIYDKNWTVLKRVPVRDLLDTLQQVNDAYAIVFDGVGTQRLVDAAVG
HHHHHHHCCCEEEEEECCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHC
KGIKMLIMTRIGNIAKVPSDMVILTFNDIINK
CCHHHHHHHHCCCHHCCCCCEEEEEEHHHHCC
>Mature Secondary Structure 
GALTISAKYLIELGFEVQGTVDKPDIIGALFSQTEGLLGSDLDLRELQNTSRIGRIEVE
CCEEEEHHHHEEECCEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCEEEEE
VEHRGDKTVGKVYVPSNLDHYETALIAAMLETVDRVGPYNAKFQVNSIKDLRSEKRKLII
EECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHH
DRAKELIKLIERETIPDTKELMDKFLGEVKQGEVVSYGPEGLPAGPDVESSDTVIIVEGR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEEEEECC
ADVVNLIKHGYRNVIAIEGASGGIPKTVIELSRRKTTIAFTDGDRGGEMILRELLKVADI
HHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCC
DYIARAPPGKEVEQLTAKEIAKALRNKIPVEEYINQLSKKDRQIIEESKKQIEQAQVQPS
HHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AAPTSPQPQPESTQPTQPIQQVQVTQQTQVIEVPAQTQGQVQVTTMQQSTQQTPQLPTSV
CCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCCCCCEEEEEEHHHHCCCCCCCHHH
VDEINKLSGTLEAIIYDKNWTVLKRVPVRDLLDTLQQVNDAYAIVFDGVGTQRLVDAAVG
HHHHHHHCCCEEEEEECCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHC
KGIKMLIMTRIGNIAKVPSDMVILTFNDIINK
CCHHHHHHHHCCCHHCCCCCEEEEEEHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA