| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159040697
Identifier: 159040697
GI number: 159040697
Start: 125107
End: 125763
Strand: Reverse
Name: 159040697
Synonym: Cmaq_0105
Alternate gene names: NA
Gene position: 125763-125107 (Counterclockwise)
Preceding gene: 159040699
Following gene: 159040696
Centisome position: 6.05
GC content: 43.38
Gene sequence:
>657_bases ATGGGGTGTGTGAGGATTGGTTTAATTATAGTGGATTTGGATATGACTCTAGTGGATACTGCTAGGCGTTGCTATGATGT GTTGGTTAAGTTGAGTAATGTTAATGGTGTATCGTTCAGTGAGTTCATGGAAATGTACTACGATGAGAGAGGTATTAGGA GTGGCTTAGCCTTAATCATAGGCCCCAATGCCCTTGATTACTGGTTTTGGAGGAGGTGCTGGTTAAGGTACATTAATGAT GGTGAGTACGGGGAATTAATGCCAGGTGCCTTGGAGGCTTTAAGGATTCTTAAGGGGGAGGGTAGGTTAATTGTAATGGC TACTGGTAGGGAGATTGAAAGCAACCTACTAACCCCTGAATTAGCAGTATACGGCTTATTGAACCTGCTTGATGGTTACA TGGCCCTCGGTGACCTTGGGCCTAATTACAATAAGGGTGATTTACTTAAGCGAATACTGGGTATTTACAATAATGGTAGC GTTAAGGGCGCCGTATACGTTACTGATCACCCAAGGGATATTGAGGTGTGTAGGGGCATGGGGTTGTTGAGTATTGGTGT GTTGAATAAGTGGGTCAAGGAATTGAATGCTGATAAAGTCATTAGGAACCTAATGGATCTACCTAAGGCTGTTAAGGAAC TTGAGGAAGCCTCGTAA
Upstream 100 bases:
>100_bases CCGATGGTGCGGGTAGTGGGCGCAAATCCAGTCCTAGTGGCCTCCTGGTGGCTTGGGTTGGTTTTCCTATGGTGGATTAG GTTTATTACCTTGCCTAGTA
Downstream 100 bases:
>100_bases CTCAACCACGGTGGTTTAAACGTAATTGTTAAAAGTTAAGGATTAATAGTAATGGTAGTGTTTTAAATGAGTCGTGAAGT TGATTTAGGGGGTGTTGAGG
Product: hydrolase
Products: NA
Alternate protein names: Hydrolase
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MGCVRIGLIIVDLDMTLVDTARRCYDVLVKLSNVNGVSFSEFMEMYYDERGIRSGLALIIGPNALDYWFWRRCWLRYIND GEYGELMPGALEALRILKGEGRLIVMATGREIESNLLTPELAVYGLLNLLDGYMALGDLGPNYNKGDLLKRILGIYNNGS VKGAVYVTDHPRDIEVCRGMGLLSIGVLNKWVKELNADKVIRNLMDLPKAVKELEEAS
Sequences:
>Translated_218_residues MGCVRIGLIIVDLDMTLVDTARRCYDVLVKLSNVNGVSFSEFMEMYYDERGIRSGLALIIGPNALDYWFWRRCWLRYIND GEYGELMPGALEALRILKGEGRLIVMATGREIESNLLTPELAVYGLLNLLDGYMALGDLGPNYNKGDLLKRILGIYNNGS VKGAVYVTDHPRDIEVCRGMGLLSIGVLNKWVKELNADKVIRNLMDLPKAVKELEEAS >Mature_217_residues GCVRIGLIIVDLDMTLVDTARRCYDVLVKLSNVNGVSFSEFMEMYYDERGIRSGLALIIGPNALDYWFWRRCWLRYINDG EYGELMPGALEALRILKGEGRLIVMATGREIESNLLTPELAVYGLLNLLDGYMALGDLGPNYNKGDLLKRILGIYNNGSV KGAVYVTDHPRDIEVCRGMGLLSIGVLNKWVKELNADKVIRNLMDLPKAVKELEEAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24453; Mature: 24322
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCVRIGLIIVDLDMTLVDTARRCYDVLVKLSNVNGVSFSEFMEMYYDERGIRSGLALII CCCEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEEE GPNALDYWFWRRCWLRYINDGEYGELMPGALEALRILKGEGRLIVMATGREIESNLLTPE CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHCCCHH LAVYGLLNLLDGYMALGDLGPNYNKGDLLKRILGIYNNGSVKGAVYVTDHPRDIEVCRGM HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHCCC GLLSIGVLNKWVKELNADKVIRNLMDLPKAVKELEEAS CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GCVRIGLIIVDLDMTLVDTARRCYDVLVKLSNVNGVSFSEFMEMYYDERGIRSGLALII CCEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEEE GPNALDYWFWRRCWLRYINDGEYGELMPGALEALRILKGEGRLIVMATGREIESNLLTPE CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHCCCHH LAVYGLLNLLDGYMALGDLGPNYNKGDLLKRILGIYNNGSVKGAVYVTDHPRDIEVCRGM HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHCCC GLLSIGVLNKWVKELNADKVIRNLMDLPKAVKELEEAS CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA