| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is yebQ [C]
Identifier: 159040676
GI number: 159040676
Start: 99770
End: 101539
Strand: Reverse
Name: yebQ [C]
Synonym: Cmaq_0084
Alternate gene names: 159040676
Gene position: 101539-99770 (Counterclockwise)
Preceding gene: 159040677
Following gene: 159040673
Centisome position: 4.89
GC content: 44.07
Gene sequence:
>1770_bases TTGAGGGAAGGGTTTTTAAGCGATAGGGTGTTAAGCGGTAATTATATGTCTAATGAGCCATCGGAGCTAATTAGTGAGGA GAGGAGGAGGGCAATCCTGGTTAACTCATTCCTGGGATCATTAATGGCTTCAATGACTATGTCAGCAATAATAATAGCGT TACCTGATGTATTAAGGGGTATTGGTGTTGATCCAATGTCACCACTTGGCTTTACATCAATGCTTTGGTTAATGTTCTCA TACCCATTAATGGTTGCTGTGGCTGTACCAATAGTGGGTAGGTTATCCGACATGTATGGTAGGGGTAGAATGTTCACGAT AGGTGATGCAGTATTCACAATACTCTCAACGCTACTAGGCTTAGTGCCAGGATATGGATTAGTGGCAGCATTACAGATGA TTGCTTACAGGTTTATTCAAGGCTTAGGTGGATCCATGATGTTTACGAATAGTGCCGCAATAATAACCGACGTCTACCCA CCCCACAGGAGGGGTGTCGCTATGGGTATTGTCAGCATAGCCTTCAGTGCAGGTAGCATAATAGGCCTAGTTATAGGCGG TGTATTAGCTGTAATTAACTGGAGGCTGGTTTTCCTAATTAATACGCCAATAGGCATAATCAGTACCATATGGGCTTACT TAACGGTATATAAGTTACCGTTAGGCATTAAGAAGGTTAAGGTTGATTACATAGGTGCATCAATGCTTGCTGCATCACTT GTCCTTCTCCTTCTAGGCATAACATTCGGTATGCTGCCTTCGGGGAACTCATCAATGAGTTGGGGGAATCCAACCGTATG GGGACTAATAGGTGGTGGATTACTGCTCCTGGCTTTACTGATACCGATTGAAATGAGGATTAAGGAGCCTATACTTAGGA TTAACTTATTTAAGATAAGGCCATTCACGTTCGGTGTATTAAGTGCATTATTCCTGTTCCTAGCTCAAGGTGCAAACGTA TTCGTTTTATCACTACTACTGCAGGCAATATACCTCCCAATGCATGGAGTACCTTACTCTGAAACGCCACTATTGGCTGG CATATACCTAATACCGAGTAGTGTGGCTAATGCCATATTTGCCCCATTGGGTGGTAGATTAATTAATAGGTTTGGAGCCA GGGTTGTTTCAACAATCGGTGCAATACTACTGGGGATTAGCTTCGAGCTGCTGACTACGCTTTCAATGAACTTTAATTAC ACTCTATTCGCAGCCGACTTACTCCTAATGGGTGCTGGTTCAGGCTTATTCCAGTCCCCTAACTTAGTCTCAATAATGAG TTCAGTACCCCAGGAGGATAGGTCAGCGGCATCTGGGTTAAGGGCAAGCATGCAGAACATAGGGTTATTAATGAGTTTCG CAGTATTCCTAACACTCATATTAGCTGGATCAGCGGCATCATTATCATTATCACTAAGTAAGGCGTTAATTAACGCTGGT GTTCCTCAAAGCGACGTAGCGGCATTATCAAGAATACCCCCAGCCTATGCCTTATTCGCAGCATTCATGGGTTATGACCC AATAAAAGTCATGCTTAGTGAAGCTGGTATTCAATTACCTAGTAGCATTTACGCCGCTGTGACTCACCCATCATTCTTCC CAAGCGCCATAGCCCCAGCTATGGCTATGGGTTTCGAGTACGCCTACCACATAGCCGCTGTAATGGCGTTTGCGGCGGCG GTGTTCTCGTACTTAAGGGGTAGGGAGCATATTGTTCATCAAGTTAAGTTACTGGAGAGTGAAAACGGTAAGAGACCTTT CACTGAGTAG
Upstream 100 bases:
>100_bases TACGTAGCTAAGAGGCTTAAACCATTGACTACGTTACTACCAATACCCATTCACATTCCGCTTCTCAACTATGTTTAACC CTATATAGGGCATTATTAGA
Downstream 100 bases:
>100_bases TAATCTATGGTTAAATTATGAATTCACCGGTGTTACTTAGTGTCTTGTAACCCGGTATTGAGCTTAATCTCCTCTTAAAC TCCTCATCCTTAAGTACACT
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 589; Mature: 589
Protein sequence:
>589_residues MREGFLSDRVLSGNYMSNEPSELISEERRRAILVNSFLGSLMASMTMSAIIIALPDVLRGIGVDPMSPLGFTSMLWLMFS YPLMVAVAVPIVGRLSDMYGRGRMFTIGDAVFTILSTLLGLVPGYGLVAALQMIAYRFIQGLGGSMMFTNSAAIITDVYP PHRRGVAMGIVSIAFSAGSIIGLVIGGVLAVINWRLVFLINTPIGIISTIWAYLTVYKLPLGIKKVKVDYIGASMLAASL VLLLLGITFGMLPSGNSSMSWGNPTVWGLIGGGLLLLALLIPIEMRIKEPILRINLFKIRPFTFGVLSALFLFLAQGANV FVLSLLLQAIYLPMHGVPYSETPLLAGIYLIPSSVANAIFAPLGGRLINRFGARVVSTIGAILLGISFELLTTLSMNFNY TLFAADLLLMGAGSGLFQSPNLVSIMSSVPQEDRSAASGLRASMQNIGLLMSFAVFLTLILAGSAASLSLSLSKALINAG VPQSDVAALSRIPPAYALFAAFMGYDPIKVMLSEAGIQLPSSIYAAVTHPSFFPSAIAPAMAMGFEYAYHIAAVMAFAAA VFSYLRGREHIVHQVKLLESENGKRPFTE
Sequences:
>Translated_589_residues MREGFLSDRVLSGNYMSNEPSELISEERRRAILVNSFLGSLMASMTMSAIIIALPDVLRGIGVDPMSPLGFTSMLWLMFS YPLMVAVAVPIVGRLSDMYGRGRMFTIGDAVFTILSTLLGLVPGYGLVAALQMIAYRFIQGLGGSMMFTNSAAIITDVYP PHRRGVAMGIVSIAFSAGSIIGLVIGGVLAVINWRLVFLINTPIGIISTIWAYLTVYKLPLGIKKVKVDYIGASMLAASL VLLLLGITFGMLPSGNSSMSWGNPTVWGLIGGGLLLLALLIPIEMRIKEPILRINLFKIRPFTFGVLSALFLFLAQGANV FVLSLLLQAIYLPMHGVPYSETPLLAGIYLIPSSVANAIFAPLGGRLINRFGARVVSTIGAILLGISFELLTTLSMNFNY TLFAADLLLMGAGSGLFQSPNLVSIMSSVPQEDRSAASGLRASMQNIGLLMSFAVFLTLILAGSAASLSLSLSKALINAG VPQSDVAALSRIPPAYALFAAFMGYDPIKVMLSEAGIQLPSSIYAAVTHPSFFPSAIAPAMAMGFEYAYHIAAVMAFAAA VFSYLRGREHIVHQVKLLESENGKRPFTE >Mature_589_residues MREGFLSDRVLSGNYMSNEPSELISEERRRAILVNSFLGSLMASMTMSAIIIALPDVLRGIGVDPMSPLGFTSMLWLMFS YPLMVAVAVPIVGRLSDMYGRGRMFTIGDAVFTILSTLLGLVPGYGLVAALQMIAYRFIQGLGGSMMFTNSAAIITDVYP PHRRGVAMGIVSIAFSAGSIIGLVIGGVLAVINWRLVFLINTPIGIISTIWAYLTVYKLPLGIKKVKVDYIGASMLAASL VLLLLGITFGMLPSGNSSMSWGNPTVWGLIGGGLLLLALLIPIEMRIKEPILRINLFKIRPFTFGVLSALFLFLAQGANV FVLSLLLQAIYLPMHGVPYSETPLLAGIYLIPSSVANAIFAPLGGRLINRFGARVVSTIGAILLGISFELLTTLSMNFNY TLFAADLLLMGAGSGLFQSPNLVSIMSSVPQEDRSAASGLRASMQNIGLLMSFAVFLTLILAGSAASLSLSLSKALINAG VPQSDVAALSRIPPAYALFAAFMGYDPIKVMLSEAGIQLPSSIYAAVTHPSFFPSAIAPAMAMGFEYAYHIAAVMAFAAA VFSYLRGREHIVHQVKLLESENGKRPFTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=432, Percent_Identity=28.2407407407407, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1790195, Length=439, Percent_Identity=25.2847380410023, Blast_Score=99, Evalue=8e-22, Organism=Escherichia coli, GI1789042, Length=369, Percent_Identity=23.5772357723577, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1788710, Length=412, Percent_Identity=25.4854368932039, Blast_Score=82, Evalue=8e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 62953; Mature: 62953
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREGFLSDRVLSGNYMSNEPSELISEERRRAILVNSFLGSLMASMTMSAIIIALPDVLRG CCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IGVDPMSPLGFTSMLWLMFSYPLMVAVAVPIVGRLSDMYGRGRMFTIGDAVFTILSTLLG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHH LVPGYGLVAALQMIAYRFIQGLGGSMMFTNSAAIITDVYPPHRRGVAMGIVSIAFSAGSI HCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHH IGLVIGGVLAVINWRLVFLINTPIGIISTIWAYLTVYKLPLGIKKVKVDYIGASMLAASL HHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHH VLLLLGITFGMLPSGNSSMSWGNPTVWGLIGGGLLLLALLIPIEMRIKEPILRINLFKIR HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEEC PFTFGVLSALFLFLAQGANVFVLSLLLQAIYLPMHGVPYSETPLLAGIYLIPSSVANAIF CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH APLGGRLINRFGARVVSTIGAILLGISFELLTTLSMNFNYTLFAADLLLMGAGSGLFQSP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC NLVSIMSSVPQEDRSAASGLRASMQNIGLLMSFAVFLTLILAGSAASLSLSLSKALINAG CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC VPQSDVAALSRIPPAYALFAAFMGYDPIKVMLSEAGIQLPSSIYAAVTHPSFFPSAIAPA CCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHH MAMGFEYAYHIAAVMAFAAAVFSYLRGREHIVHQVKLLESENGKRPFTE HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MREGFLSDRVLSGNYMSNEPSELISEERRRAILVNSFLGSLMASMTMSAIIIALPDVLRG CCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IGVDPMSPLGFTSMLWLMFSYPLMVAVAVPIVGRLSDMYGRGRMFTIGDAVFTILSTLLG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHH LVPGYGLVAALQMIAYRFIQGLGGSMMFTNSAAIITDVYPPHRRGVAMGIVSIAFSAGSI HCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHH IGLVIGGVLAVINWRLVFLINTPIGIISTIWAYLTVYKLPLGIKKVKVDYIGASMLAASL HHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHH VLLLLGITFGMLPSGNSSMSWGNPTVWGLIGGGLLLLALLIPIEMRIKEPILRINLFKIR HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEEC PFTFGVLSALFLFLAQGANVFVLSLLLQAIYLPMHGVPYSETPLLAGIYLIPSSVANAIF CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH APLGGRLINRFGARVVSTIGAILLGISFELLTTLSMNFNYTLFAADLLLMGAGSGLFQSP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC NLVSIMSSVPQEDRSAASGLRASMQNIGLLMSFAVFLTLILAGSAASLSLSLSKALINAG CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC VPQSDVAALSRIPPAYALFAAFMGYDPIKVMLSEAGIQLPSSIYAAVTHPSFFPSAIAPA CCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHH MAMGFEYAYHIAAVMAFAAAVFSYLRGREHIVHQVKLLESENGKRPFTE HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]