Definition Caldivirga maquilingensis IC-167 chromosome, complete genome.
Accession NC_009954
Length 2,077,567

Click here to switch to the map view.

The map label for this gene is yebQ [C]

Identifier: 159040676

GI number: 159040676

Start: 99770

End: 101539

Strand: Reverse

Name: yebQ [C]

Synonym: Cmaq_0084

Alternate gene names: 159040676

Gene position: 101539-99770 (Counterclockwise)

Preceding gene: 159040677

Following gene: 159040673

Centisome position: 4.89

GC content: 44.07

Gene sequence:

>1770_bases
TTGAGGGAAGGGTTTTTAAGCGATAGGGTGTTAAGCGGTAATTATATGTCTAATGAGCCATCGGAGCTAATTAGTGAGGA
GAGGAGGAGGGCAATCCTGGTTAACTCATTCCTGGGATCATTAATGGCTTCAATGACTATGTCAGCAATAATAATAGCGT
TACCTGATGTATTAAGGGGTATTGGTGTTGATCCAATGTCACCACTTGGCTTTACATCAATGCTTTGGTTAATGTTCTCA
TACCCATTAATGGTTGCTGTGGCTGTACCAATAGTGGGTAGGTTATCCGACATGTATGGTAGGGGTAGAATGTTCACGAT
AGGTGATGCAGTATTCACAATACTCTCAACGCTACTAGGCTTAGTGCCAGGATATGGATTAGTGGCAGCATTACAGATGA
TTGCTTACAGGTTTATTCAAGGCTTAGGTGGATCCATGATGTTTACGAATAGTGCCGCAATAATAACCGACGTCTACCCA
CCCCACAGGAGGGGTGTCGCTATGGGTATTGTCAGCATAGCCTTCAGTGCAGGTAGCATAATAGGCCTAGTTATAGGCGG
TGTATTAGCTGTAATTAACTGGAGGCTGGTTTTCCTAATTAATACGCCAATAGGCATAATCAGTACCATATGGGCTTACT
TAACGGTATATAAGTTACCGTTAGGCATTAAGAAGGTTAAGGTTGATTACATAGGTGCATCAATGCTTGCTGCATCACTT
GTCCTTCTCCTTCTAGGCATAACATTCGGTATGCTGCCTTCGGGGAACTCATCAATGAGTTGGGGGAATCCAACCGTATG
GGGACTAATAGGTGGTGGATTACTGCTCCTGGCTTTACTGATACCGATTGAAATGAGGATTAAGGAGCCTATACTTAGGA
TTAACTTATTTAAGATAAGGCCATTCACGTTCGGTGTATTAAGTGCATTATTCCTGTTCCTAGCTCAAGGTGCAAACGTA
TTCGTTTTATCACTACTACTGCAGGCAATATACCTCCCAATGCATGGAGTACCTTACTCTGAAACGCCACTATTGGCTGG
CATATACCTAATACCGAGTAGTGTGGCTAATGCCATATTTGCCCCATTGGGTGGTAGATTAATTAATAGGTTTGGAGCCA
GGGTTGTTTCAACAATCGGTGCAATACTACTGGGGATTAGCTTCGAGCTGCTGACTACGCTTTCAATGAACTTTAATTAC
ACTCTATTCGCAGCCGACTTACTCCTAATGGGTGCTGGTTCAGGCTTATTCCAGTCCCCTAACTTAGTCTCAATAATGAG
TTCAGTACCCCAGGAGGATAGGTCAGCGGCATCTGGGTTAAGGGCAAGCATGCAGAACATAGGGTTATTAATGAGTTTCG
CAGTATTCCTAACACTCATATTAGCTGGATCAGCGGCATCATTATCATTATCACTAAGTAAGGCGTTAATTAACGCTGGT
GTTCCTCAAAGCGACGTAGCGGCATTATCAAGAATACCCCCAGCCTATGCCTTATTCGCAGCATTCATGGGTTATGACCC
AATAAAAGTCATGCTTAGTGAAGCTGGTATTCAATTACCTAGTAGCATTTACGCCGCTGTGACTCACCCATCATTCTTCC
CAAGCGCCATAGCCCCAGCTATGGCTATGGGTTTCGAGTACGCCTACCACATAGCCGCTGTAATGGCGTTTGCGGCGGCG
GTGTTCTCGTACTTAAGGGGTAGGGAGCATATTGTTCATCAAGTTAAGTTACTGGAGAGTGAAAACGGTAAGAGACCTTT
CACTGAGTAG

Upstream 100 bases:

>100_bases
TACGTAGCTAAGAGGCTTAAACCATTGACTACGTTACTACCAATACCCATTCACATTCCGCTTCTCAACTATGTTTAACC
CTATATAGGGCATTATTAGA

Downstream 100 bases:

>100_bases
TAATCTATGGTTAAATTATGAATTCACCGGTGTTACTTAGTGTCTTGTAACCCGGTATTGAGCTTAATCTCCTCTTAAAC
TCCTCATCCTTAAGTACACT

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 589; Mature: 589

Protein sequence:

>589_residues
MREGFLSDRVLSGNYMSNEPSELISEERRRAILVNSFLGSLMASMTMSAIIIALPDVLRGIGVDPMSPLGFTSMLWLMFS
YPLMVAVAVPIVGRLSDMYGRGRMFTIGDAVFTILSTLLGLVPGYGLVAALQMIAYRFIQGLGGSMMFTNSAAIITDVYP
PHRRGVAMGIVSIAFSAGSIIGLVIGGVLAVINWRLVFLINTPIGIISTIWAYLTVYKLPLGIKKVKVDYIGASMLAASL
VLLLLGITFGMLPSGNSSMSWGNPTVWGLIGGGLLLLALLIPIEMRIKEPILRINLFKIRPFTFGVLSALFLFLAQGANV
FVLSLLLQAIYLPMHGVPYSETPLLAGIYLIPSSVANAIFAPLGGRLINRFGARVVSTIGAILLGISFELLTTLSMNFNY
TLFAADLLLMGAGSGLFQSPNLVSIMSSVPQEDRSAASGLRASMQNIGLLMSFAVFLTLILAGSAASLSLSLSKALINAG
VPQSDVAALSRIPPAYALFAAFMGYDPIKVMLSEAGIQLPSSIYAAVTHPSFFPSAIAPAMAMGFEYAYHIAAVMAFAAA
VFSYLRGREHIVHQVKLLESENGKRPFTE

Sequences:

>Translated_589_residues
MREGFLSDRVLSGNYMSNEPSELISEERRRAILVNSFLGSLMASMTMSAIIIALPDVLRGIGVDPMSPLGFTSMLWLMFS
YPLMVAVAVPIVGRLSDMYGRGRMFTIGDAVFTILSTLLGLVPGYGLVAALQMIAYRFIQGLGGSMMFTNSAAIITDVYP
PHRRGVAMGIVSIAFSAGSIIGLVIGGVLAVINWRLVFLINTPIGIISTIWAYLTVYKLPLGIKKVKVDYIGASMLAASL
VLLLLGITFGMLPSGNSSMSWGNPTVWGLIGGGLLLLALLIPIEMRIKEPILRINLFKIRPFTFGVLSALFLFLAQGANV
FVLSLLLQAIYLPMHGVPYSETPLLAGIYLIPSSVANAIFAPLGGRLINRFGARVVSTIGAILLGISFELLTTLSMNFNY
TLFAADLLLMGAGSGLFQSPNLVSIMSSVPQEDRSAASGLRASMQNIGLLMSFAVFLTLILAGSAASLSLSLSKALINAG
VPQSDVAALSRIPPAYALFAAFMGYDPIKVMLSEAGIQLPSSIYAAVTHPSFFPSAIAPAMAMGFEYAYHIAAVMAFAAA
VFSYLRGREHIVHQVKLLESENGKRPFTE
>Mature_589_residues
MREGFLSDRVLSGNYMSNEPSELISEERRRAILVNSFLGSLMASMTMSAIIIALPDVLRGIGVDPMSPLGFTSMLWLMFS
YPLMVAVAVPIVGRLSDMYGRGRMFTIGDAVFTILSTLLGLVPGYGLVAALQMIAYRFIQGLGGSMMFTNSAAIITDVYP
PHRRGVAMGIVSIAFSAGSIIGLVIGGVLAVINWRLVFLINTPIGIISTIWAYLTVYKLPLGIKKVKVDYIGASMLAASL
VLLLLGITFGMLPSGNSSMSWGNPTVWGLIGGGLLLLALLIPIEMRIKEPILRINLFKIRPFTFGVLSALFLFLAQGANV
FVLSLLLQAIYLPMHGVPYSETPLLAGIYLIPSSVANAIFAPLGGRLINRFGARVVSTIGAILLGISFELLTTLSMNFNY
TLFAADLLLMGAGSGLFQSPNLVSIMSSVPQEDRSAASGLRASMQNIGLLMSFAVFLTLILAGSAASLSLSLSKALINAG
VPQSDVAALSRIPPAYALFAAFMGYDPIKVMLSEAGIQLPSSIYAAVTHPSFFPSAIAPAMAMGFEYAYHIAAVMAFAAA
VFSYLRGREHIVHQVKLLESENGKRPFTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. EmrB family [H]

Homologues:

Organism=Escherichia coli, GI87081983, Length=432, Percent_Identity=28.2407407407407, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1790195, Length=439, Percent_Identity=25.2847380410023, Blast_Score=99, Evalue=8e-22,
Organism=Escherichia coli, GI1789042, Length=369, Percent_Identity=23.5772357723577, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1788710, Length=412, Percent_Identity=25.4854368932039, Blast_Score=82, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004638
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 62953; Mature: 62953

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREGFLSDRVLSGNYMSNEPSELISEERRRAILVNSFLGSLMASMTMSAIIIALPDVLRG
CCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
IGVDPMSPLGFTSMLWLMFSYPLMVAVAVPIVGRLSDMYGRGRMFTIGDAVFTILSTLLG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHH
LVPGYGLVAALQMIAYRFIQGLGGSMMFTNSAAIITDVYPPHRRGVAMGIVSIAFSAGSI
HCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHH
IGLVIGGVLAVINWRLVFLINTPIGIISTIWAYLTVYKLPLGIKKVKVDYIGASMLAASL
HHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHH
VLLLLGITFGMLPSGNSSMSWGNPTVWGLIGGGLLLLALLIPIEMRIKEPILRINLFKIR
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEEC
PFTFGVLSALFLFLAQGANVFVLSLLLQAIYLPMHGVPYSETPLLAGIYLIPSSVANAIF
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
APLGGRLINRFGARVVSTIGAILLGISFELLTTLSMNFNYTLFAADLLLMGAGSGLFQSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC
NLVSIMSSVPQEDRSAASGLRASMQNIGLLMSFAVFLTLILAGSAASLSLSLSKALINAG
CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
VPQSDVAALSRIPPAYALFAAFMGYDPIKVMLSEAGIQLPSSIYAAVTHPSFFPSAIAPA
CCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHH
MAMGFEYAYHIAAVMAFAAAVFSYLRGREHIVHQVKLLESENGKRPFTE
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MREGFLSDRVLSGNYMSNEPSELISEERRRAILVNSFLGSLMASMTMSAIIIALPDVLRG
CCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
IGVDPMSPLGFTSMLWLMFSYPLMVAVAVPIVGRLSDMYGRGRMFTIGDAVFTILSTLLG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHH
LVPGYGLVAALQMIAYRFIQGLGGSMMFTNSAAIITDVYPPHRRGVAMGIVSIAFSAGSI
HCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHH
IGLVIGGVLAVINWRLVFLINTPIGIISTIWAYLTVYKLPLGIKKVKVDYIGASMLAASL
HHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHH
VLLLLGITFGMLPSGNSSMSWGNPTVWGLIGGGLLLLALLIPIEMRIKEPILRINLFKIR
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEEC
PFTFGVLSALFLFLAQGANVFVLSLLLQAIYLPMHGVPYSETPLLAGIYLIPSSVANAIF
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
APLGGRLINRFGARVVSTIGAILLGISFELLTTLSMNFNYTLFAADLLLMGAGSGLFQSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC
NLVSIMSSVPQEDRSAASGLRASMQNIGLLMSFAVFLTLILAGSAASLSLSLSKALINAG
CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
VPQSDVAALSRIPPAYALFAAFMGYDPIKVMLSEAGIQLPSSIYAAVTHPSFFPSAIAPA
CCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHH
MAMGFEYAYHIAAVMAFAAAVFSYLRGREHIVHQVKLLESENGKRPFTE
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]