| Definition | Salinispora arenicola CNS-205 chromosome, complete genome. |
|---|---|
| Accession | NC_009953 |
| Length | 5,786,361 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 159036730
GI number:
Start: 1218143
End: 1222339
Strand: Direct
Name: Not Available
Synonym: Sare_1084
Alternate gene names: NA
Gene position: NA
Preceding gene: 159036729
Following gene: 159036731
Centisome position: NA
GC content: NA
Gene sequence:
>4197_bases GTGTCGGTCATGATTTCCGCCGTCGAGTCCACCGACTTGTTCGTCGGCACCGAGGACAACCCGCGTCAGGTGCTCCGTGT GACGCTTGACGGCCCGCCCGGGCCGGTCACCGTCACCGGGCCGGGTGTCTCCGGTAACGCGACCGGCACGGGCGTCGTCG AGGTCCCCCTGGACATCGACGACCGGACCCCCGGCACGGAGGTCCCGGTCACCGTCACGGCCGGCGACACGACCGTGGAG ACCACGGTCGTGGTCGCCGAGCCGGGCTGGACGATGTTCCTCGTCTCGCACTTCCACTACGACCCGGTGTGGTGGAACAC ACAGGCCGCGTACACCTCGCCGTGGGAGTTGCTCTCCGGCGACGCCACCACCAGGCCGCTGTGGGAGCGCAACGGGTTCG CGCTGGTGGACGCGCACATGGACCTCGCCCTGCGCGACCCGGTGTACAAGTTCGTCCTCGCCGAGATCGACTACCTCAAG CCGTACTTCGACCTGTATCCCGAGCGCCGGGCCGACCTTCGTCTGCTGCTCGAACGTGGCCAGGTCGAGCTGATCGGCGG TACCTACAACGAACCCAACACCAACCTCACCGGCGCCGAGACCACCATCCGCAACATCATCTACGGCGTCGGCTACCAGC GTGACATCCTGGGCGGAGACCCGCAGACGGCATGGCAGCTGGACGTGTTCGGACATGACCCGCAGTTCCCGGGCTACCTC GCCGACGCCGGGCTGACCGGGTCGGCGTGGGCGCGTGGCCCGTTCCACCAGTGGGGGCCGATCCAGAAGAACTTCCGCGA GGCCAAGAACGACGCGACGGTCATGCAGTTCCCGAGCGAGTTCGAATGGATCTCGCCGTCGGGTCTCGGCGTCCTCACCC ACTTCATGCCGCACCACTACTCGGCCGGCTGGTGGATGGACTCCTCAGCCGACCTGCCCAGCGCCGAGAAGGCCGTCTAC GAGCTGTACCAGCGCCTCAAGCCGGTCGGGGCGACGAAGAACCTGCTGCTGCCCGTCGGCACCGACTACACGCCGCCGAA CAAGTGGGTCACCGAGATCCACCGCTCGTGGGCGGCGAAGTACGTCTGGCCCCGCTTCGTCTGCGGCACCCCCCGGGACT TCCTCGACGCCGTCCGCGCGGAGATGGCCGCGACCGGGCGCCGCCCCAGCCCACAGACCCGGGACATGAACCCGATCTAC ACGGGCAAGGACGTCTCCTACATCGACACGAAGCAGGCGCAGCGGGCCGGGGAGGTCGCCGCCGTCGACGCGGAGAAGCT GGCGACGCTGGCCGCGCTGGACGGGCTCGGCAGGTATCCCGACGCCGCACTCGACAAGGTCTGGCGGCAGCTCGCCTACG GCGCACACCACGACGCGATCACCGGGTCGGAGTCCGACCAGGTCTACATCGACCTGCTCTCCGGCTGGCGCGAGGCGTAC GACCTGGCAGCCTCCGTACGGGACCGGGCGCTGGACGTGCTCATCGGTACGGTCGACACCACCGGTGAGGGAACACCGGT CGTCGTCACGAACACGCTCTCCTTCGTTCGTTCCGATCTGGTGTCGGTACGACTTCCCGACGGCCACGAAGGCGGACGGG TGATCGACGACACCGGCGCCGAGGTGCCGGCCGTCGTCGACCGGGGAACGCTGCGGTTCCACGCCGTCGACGTTCCCGCC ATGGGGTGGCGGACCTGGCGGCTGCTACCGGGTGCGTCCAGTGCCGAGCCGGCCTGGACACCCGCCGACGGTGCCGCGAT CGAGAACGCCTACTACCGGGTCACCGCCGACGCCGAGCGCGGCGGCGGACTCGACAGCGTCTACGACAAGGTCTCGGACC GCGAACTGATCCGCGCCGAGCACCTCGGCAACGAGCTGCGGATCTACGAGGAGTACCCGGCCCACCCGGACTTCGGTGAG GGCCCGTGGCACCTCATCCCGAAGGGGCCGGTCGTGGGCAGCGCGGCGGCGGCAGCCACGGTCCGGGCCGAGACGAGCCC GATCGGCGCCCGCCTGGTGGTTTCCGGCACCGTCGACGGAATCGGCTACGAGCAGACCATCACGCTGTGGCACGGTGTGC GCCGGGTGGACTGCCGGACCCGCATCGTCGACTACGCCGGCGCCGACCGGCTGGTGCGGGTGCGCTTCCCGGTCGACCTG CCCGGCGCGCTGCCGGTTTCCGAGGTTGCCGCCGCCGTGGTCGGCCGTGGGTTCGCGCTCCCGGACGTCGACGCGGCGGA AGCCCCCTGGACGCTGGACAACCCGGCCAACACCTGGTTCGGACTCGGTTCCACGGCTCGGGTCTCGCTCTCCGACGCCG CCGGTTCGCCGCTGGGCGACCGCGCCCTCGGTGTCGCCGAGGTGGTGACGCCCACGCTCGGTGAGGCGGCCGACGCCCGC GATCTCGTCGTCGCGCTCGCCGCCGTCGGTGTCACCGCGACGACCGCCAGCGCCGACTGGGCGCGGTACGGCTGGCTCGA CGTCGACTCGAACCTGCCCGACTTCCGCATTCTCGTCGGGGGGCCGCAGACCAACGACGCCACCCGGGAACTGCTGGAGC GGGCGGGCCCGGAATATGTCGACGCGCTGAAGCGGCACGGCCGGGTGTGGGTTCCCGCGGAGAAGCCGCTGCACGAGGTG TGGCAGCCCAACGCCGACCTACGGGACCTGCGGATGCTGCCGGCGCTCGTGGTGACCGACGTCGCCTCGCTGACCGAGGA CGTCGCCGACGCCCGGATCCAGGCATGCTGCCCCGGTGCGGTTCCGGCGTCGGAGCTGCTGTCCGACCACACCGTCGCGA TGCTCACCTACGGGCTGCCCGGATTCGCGGTCGACCCGACCGGAGCGATGCACCTGTCGCTGATGCGCTCGTGCACCGGC TGGCCGTCCGGGGTGTGGATCGACCCGCCGAAGCGGACTCTGCCCGACGGCGCGTCGTTCCAGCTGCAGCACTGGACCCA TGAGTTCAACTACGCGCTGACCAGCGGAGACGGCGACTGGCGGGAGCTCACGCTGCCCGCACAGGGCCAGGAGTTCAACC ACCCGCTGTACGGCCGGGTTGCCGAGAACCATGCGGGGACGAAGCCAGCGACGCACTCGTACCTGGCGGTGGAGCCCGCG CGGGAGGTGCTGCTCGGGACGCTCAAGCCCACCGGAAACCCGATCGCGCACGGCACCGCCGTGTCCTCGGACCCGGCGGA CGGGGTCAGTCTGCGGCTGCTCGAGTCGACCGGGCTCGGCCGTTCCGCGACGCTGACCGGCGCGCTGGCGCTGGCCGACA AGCACCAGGCCGACCTGATGGAACGTCCTGGTGACGCGCTCCCGGACGCGATTGGGTTGGCCGGCTCGCAGGTCACCACG GTCATCGGTCGACCGGTAGCGGCCCGGCGTGGTGAGGAACCGCTCGGGCCCGAGGTCGAGATCGCCCAGCCGGTGCACTC CCGGTACTGGTTGCACAACCGGGGCCCGGCGCCGATGGGCTACCTACCGGTCTCCGTGGGTGTCTCACCCGGGCTGCTGC AGACCGTCGGCGAGCCGGTGGAGGTCTCGGTGGTGCTCGCCTCGCACCTGCGCGACGCTGCGGTCGAGGGGACGGTCAGT GTCCTCGTCCCAGAAGGGTGGACGGCCTCCCTGGGCAGCCGTCCGTACCGGCTCGACCCCGATGGTCAGCTTCGCTTCGC CGTCACCGTGACACCGCCTGTCGGGGTGGAGTCCGGGCTGTACTTCGTCGCCGCCCGGACCGAACACCTCGGGCAGACGA TCGAGGACGTCACCACCGTCGCCGTCGGTGAACTTCCTGATCTGCTGCCCGTGCCCGGGGACATCCCGGAGGACTGGGAC GCGGCGCAGGGCACGACGGCCGAGTCGGGACGCGACACCGGGCTCACCGTGGATGTCACCACCACCTCGGTCACCGTCAC CCCCGGGGGCCGGGCAACCGTCGGGGTGTGCCTGCATAACCGCACCCGTGGTGAGATCCGGGCTGAACTCCAGCTTGTCT CACCCTGGGGCACCTGGGACGCCATCGCCGAGCCGATCCGCGGCGTCGCGTTGCCCGCGGGTGGATCCGAGACGGTCACC TTCGACGTCGTTCCCCCGCGTGATGCCGATCCGGGCCGGTTCTGGGCGCTGGTCAAGGTGATGTGGTTCGGGCGGTGCCA GTACGCCCCGACCGTCGAGCTGGTGCTGGAACCGTGA
Upstream 100 bases:
>100_bases ATATACGAGTTCGAGGCCTGGGGCGAGTAGTCTTCCCCACCCTGCCACCAACGTGAGCCTGTTTGCGCTGGTGGGAGTAC CAACAAGAAAGGATGACCCC
Downstream 100 bases:
>100_bases CGACCCAGCACCTCGACGAGTCGGTGCTGGGCTGGCTCGACGGACAGCCACTGGCGCGGACGGAACTCGACCGCCGGCTC GCCGCCCTGCGCGGCGGGCC
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1398_residues MSVMISAVESTDLFVGTEDNPRQVLRVTLDGPPGPVTVTGPGVSGNATGTGVVEVPLDIDDRTPGTEVPVTVTAGDTTVE TTVVVAEPGWTMFLVSHFHYDPVWWNTQAAYTSPWELLSGDATTRPLWERNGFALVDAHMDLALRDPVYKFVLAEIDYLK PYFDLYPERRADLRLLLERGQVELIGGTYNEPNTNLTGAETTIRNIIYGVGYQRDILGGDPQTAWQLDVFGHDPQFPGYL ADAGLTGSAWARGPFHQWGPIQKNFREAKNDATVMQFPSEFEWISPSGLGVLTHFMPHHYSAGWWMDSSADLPSAEKAVY ELYQRLKPVGATKNLLLPVGTDYTPPNKWVTEIHRSWAAKYVWPRFVCGTPRDFLDAVRAEMAATGRRPSPQTRDMNPIY TGKDVSYIDTKQAQRAGEVAAVDAEKLATLAALDGLGRYPDAALDKVWRQLAYGAHHDAITGSESDQVYIDLLSGWREAY DLAASVRDRALDVLIGTVDTTGEGTPVVVTNTLSFVRSDLVSVRLPDGHEGGRVIDDTGAEVPAVVDRGTLRFHAVDVPA MGWRTWRLLPGASSAEPAWTPADGAAIENAYYRVTADAERGGGLDSVYDKVSDRELIRAEHLGNELRIYEEYPAHPDFGE GPWHLIPKGPVVGSAAAAATVRAETSPIGARLVVSGTVDGIGYEQTITLWHGVRRVDCRTRIVDYAGADRLVRVRFPVDL PGALPVSEVAAAVVGRGFALPDVDAAEAPWTLDNPANTWFGLGSTARVSLSDAAGSPLGDRALGVAEVVTPTLGEAADAR DLVVALAAVGVTATTASADWARYGWLDVDSNLPDFRILVGGPQTNDATRELLERAGPEYVDALKRHGRVWVPAEKPLHEV WQPNADLRDLRMLPALVVTDVASLTEDVADARIQACCPGAVPASELLSDHTVAMLTYGLPGFAVDPTGAMHLSLMRSCTG WPSGVWIDPPKRTLPDGASFQLQHWTHEFNYALTSGDGDWRELTLPAQGQEFNHPLYGRVAENHAGTKPATHSYLAVEPA REVLLGTLKPTGNPIAHGTAVSSDPADGVSLRLLESTGLGRSATLTGALALADKHQADLMERPGDALPDAIGLAGSQVTT VIGRPVAARRGEEPLGPEVEIAQPVHSRYWLHNRGPAPMGYLPVSVGVSPGLLQTVGEPVEVSVVLASHLRDAAVEGTVS VLVPEGWTASLGSRPYRLDPDGQLRFAVTVTPPVGVESGLYFVAARTEHLGQTIEDVTTVAVGELPDLLPVPGDIPEDWD AAQGTTAESGRDTGLTVDVTTTSVTVTPGGRATVGVCLHNRTRGEIRAELQLVSPWGTWDAIAEPIRGVALPAGGSETVT FDVVPPRDADPGRFWALVKVMWFGRCQYAPTVELVLEP
Sequences:
NA
Specific function: NA
COG id: COG0383
COG function: function code G; Alpha-mannosidase
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA