| Definition | Dinoroseobacter shibae DFL 12 chromosome, complete genome. |
|---|---|
| Accession | NC_009952 |
| Length | 3,789,584 |
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Identifier: 159045576
GI number:
Start: 3203392
End: 3206619
Strand: Reverse
Name: Not Available
Synonym: Dshi_3036
Alternate gene names: NA
Gene position: NA
Preceding gene: 159045577
Following gene: 159045575
Centisome position: NA
GC content: NA
Gene sequence:
>3228_bases ATGAACCCGGTGATCAAATGGATGACCGAACACCCGGTCGCCGCGAACCTGACCATGGTGCTGGTGCTTGTGGTCGGGCT TCTGAGCCTGTTCGCCATCCCGCAGAAGACATTTCCGGACTTCACCCTCGAAGTGGTCGATATCCGCGTGGTCTATCCCG GGGCCTCCCCGGGCGAGATCGAGCAGAGCATCATCCGCCCGATCGAGGACCAGATCAGCGGCATCGACGGTGTGGACGAG GTCACCGCCACGGCGCGCGAAGGCTCCGGCCAGGTGTCGGTGGCCCTGCTGCTGGGGGCGGATGTGGCCGAGAAGCTCGA CGAGGTGAAGACCGAGATCGACCGCATCACCACCTTCCCCGAGGATGCCGAGGAGCCGACCGTCACCCAACGCTCCAACC GCTCCCGCGCTTTGGAGATCGCGATTCACGGCCCGGTGCCGGAACAGGTGCTGAAGGAAGAGGCCGAGCGGCTGAAATCC GAGCTGACCCAGCTGCCCTCGGTATCCTTTGTCGAAACGGCGAACCTGCGCGACTACGAAATTTCCATCGAGGTGGACCG CGACACGCTCAATGCCTATGGGCTGACACTGGCGCAGGTCAGTCAGATCGTCGCTGCGAATTCGCTGGAACTGCCGGGAG GCGAGATCGAAACCGCGACCCTGTCGATCCCCCTGCGCACGCTCGGGCGGAACTACACCCGCGCGGATTTCGAGAACATC GTGGTGCTGACCAATGATGCAGGCGCCAAGGTGTTCCTGCGCGACATCGCGACGGTGATCGACGGGTTCGAGGACAGCGA TATCTCCGCCCGGTTCGGCGGCAACCCTTCGGCCACGGTCAACGTGTTCCGCGTGGGCGACGAGCAGCTTCTGGATATCG TGTCGGATGTGAAGGTGCATCTGGACGAGAGTTTCCGCGCCTCCCTGCCGGCAGGGGTCGACGTGACCCTCTGGCAGAAC GATGCGGACGAGTTGCAGAGCCGGCTCGACCTGCTGATCGAGAACGCGGTGCTGGGCCTGGCGCTGGTGGTGCTGTGCCT GACGCTGTTTCTCGACTTCCGGCTGGCCTTCTGGGCGGCGGCGGGGATCGCGGTCGCCTTTGCCGCCAGTTTTGCGGTGC TGAACACCATCGGCATGTCGATCAACATGATCTCGCTCTTTGGCTTCATTCTGGCCATCGGGATCGTGGTGGATAATGCC ATCGTGATCGGTGAGAACATCTACAAGAACGGCGAGGCGGGGCTGAGCCCCATGGATGCCGCGGTCAAGGGCACCCAGCG CGTGGCGGTGCCGGTGGTGTTCTCGGCGCTCACCACGGTGGTGGCGTTCATGCCGCTCTTCGAGATGCCGGGCACGCTGG GCAAGTTCCTGGGCGATATTCCGGCGGTGGTGATCATCGTGCTGCTCTTGAGCCTGTTGCAGGCGCTCTTCATCCTGCCG CGCAACCTCAGCCGTTTGGACGTGTCGCCGAGCTATCGCCCCAATATCGTGCTGCGCGGGCTGAACGCGGTGCGCCGTGT GATCGACCGGGGCCTGCAATGGTTCATCGCCCGGCCCTTCGACGCGGCACTGCGGTTTGCCACGCGCTACTGGCTGGTGC CCATCGGGGCGGTGATCGGCATGATGATCGTGACCGTCGGGTTGCTGGCCCATGGATATGTGAAGTTCAATTTCTTCCCG GCGATCGACGGCAAGTTCGTCACCGCCAATATCGAGATGGTCGACGGCACCACCTTCGATCGAACCGAAACCGTGGCCGA GCAGGTCCGCGTCGCCGCCGTGCGGGCGGGCGACCGGATCGCGGCGGACCTGCCCATGGACGAGGCGGCGGTGGTCGAGA ATATCGCCGTTGTGATCGGGCAGGGCGCCGGGGGCGGTGGTCCTGCGGGCGGCACGGCCACGACGGGGGCGACCCTGGCC AACGTTGTGGTGCGCGTCACCGATCCCGAGCTGCGCGACTGGCCGACCCGGGATTACGTCGCCGCCTGGCGCGACGAGAT CGGCGATATCGCCGGGATCAAGGTGCTCGATGTGTCGTCGGCCCTGATCGACGCGGGCGATGCCATCGCGGTGGAGCTGT CCTTGCCCGACGGCCAGGACATTGCGCCGGTGGTGGACGCATTGCGCGAGGGGCTGCGGGGTATTCCCGGTGTGTTTTCG ATCCGCGATGACCTGTCGGCCGGGCGGCTGGAGTACAAGCTGTCCCTGCGCGAGGATGCCCGTATCTACGGCGTGACCCT GTCGGACCTGGCCAGTCAGATGCGCAACGGCTTCTTCGGGATCGAGGCGACGCGGGTGCAGCGCGGCCGGGACGATGTGC GGGTCTTCGTGCGCCTGCCCGCGAACCAGCGTGACAGCCTCGCGGACCTTCTAGACTTCAAGATCCGCACCGCCGCGGGC GACCTGATCGCGCTGGGCGATGTGGCCGAGATCACCGAGGGGCTTGCCCCCACCGAGATCCTGCGCCGCAACGCCCGCAC CATCACCACGGTCACCGCCGATGTGGATGCCTCGGTCATCACGTCCAGCGAGGCCAACGCGCTGATCACCGCCGAGCTGA TCCCGCCCCTCGCGGCGCGTTACGAAGGCCTGATCGTGGAATTCGGCGGTGAACAGCGCACCCAAGGCGATGCGGGCACG GCCCTGGGCAAGGCGCTGGCCGTGGCGCTCTTCGTGATCTTTGCACTGCTGGCGCTTGTGTTCCGGTCTTACGTGCAGCC GCTGGTGGTGATGGTCGCGATCCCGCTGGGTCTGATCGGGGCGGTGATGGGGCACATGATCATGGGGCTGCCCCTGACGA TCCTGTCGATCTTCGGGATCATCGGGCTGGCTGGTGTTGTGATCAACAACTCCCTGGTGATGATCGACCTCTACAACGAG TATCTGGACAAGGGCCACGCCCTGCGCGCCGCGGTGATCGAGGGCACGAAGGACCGGTTCCGGCCGATCCTGCTGACCTC GCTCACGACCTTCCTCGGGGTCTTTCCGCTGATCATGGAAACCTCGCTGCAGGCGCAGTTTCTGATCCCGCTGGCGGTGT CCATCGGCTACGGGGTGCTCTTCGGTACGGCGATCATCCTGCTGGCGGTTCCGGCGGTGTTCATCGCACAAGCCCGGGCG TTCGACCTGGTGGCGCGGCTCTTCGGAGCGGCCGCGCCGCAGCTGCCCGAACCCGCACCCGACCCCTTGCCTGCGTCCCG TCTCGCCTCGGTCCGGGCGGCGGAATAG
Upstream 100 bases:
>100_bases CGGAGTTGATCACCAGCCCGCTCGACACGGCGGTGGCGGGCATGGCGCTGCGCCGCGCGGCGGTGACCGAACGCACCGCC GCCCTGACGGAGCAGCCCCG
Downstream 100 bases:
>100_bases CGCCGAGTGCGGCAGAACTCACGGTCCCGTGACGGGAAAAGTCATCCAGACGGCACATCTTTGCGTAATCCTTTTGAACC TCTTGCGTGAAGGAGCAAAG
Product: efflux transporter
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1075_residues MNPVIKWMTEHPVAANLTMVLVLVVGLLSLFAIPQKTFPDFTLEVVDIRVVYPGASPGEIEQSIIRPIEDQISGIDGVDE VTATAREGSGQVSVALLLGADVAEKLDEVKTEIDRITTFPEDAEEPTVTQRSNRSRALEIAIHGPVPEQVLKEEAERLKS ELTQLPSVSFVETANLRDYEISIEVDRDTLNAYGLTLAQVSQIVAANSLELPGGEIETATLSIPLRTLGRNYTRADFENI VVLTNDAGAKVFLRDIATVIDGFEDSDISARFGGNPSATVNVFRVGDEQLLDIVSDVKVHLDESFRASLPAGVDVTLWQN DADELQSRLDLLIENAVLGLALVVLCLTLFLDFRLAFWAAAGIAVAFAASFAVLNTIGMSINMISLFGFILAIGIVVDNA IVIGENIYKNGEAGLSPMDAAVKGTQRVAVPVVFSALTTVVAFMPLFEMPGTLGKFLGDIPAVVIIVLLLSLLQALFILP RNLSRLDVSPSYRPNIVLRGLNAVRRVIDRGLQWFIARPFDAALRFATRYWLVPIGAVIGMMIVTVGLLAHGYVKFNFFP AIDGKFVTANIEMVDGTTFDRTETVAEQVRVAAVRAGDRIAADLPMDEAAVVENIAVVIGQGAGGGGPAGGTATTGATLA NVVVRVTDPELRDWPTRDYVAAWRDEIGDIAGIKVLDVSSALIDAGDAIAVELSLPDGQDIAPVVDALREGLRGIPGVFS IRDDLSAGRLEYKLSLREDARIYGVTLSDLASQMRNGFFGIEATRVQRGRDDVRVFVRLPANQRDSLADLLDFKIRTAAG DLIALGDVAEITEGLAPTEILRRNARTITTVTADVDASVITSSEANALITAELIPPLAARYEGLIVEFGGEQRTQGDAGT ALGKALAVALFVIFALLALVFRSYVQPLVVMVAIPLGLIGAVMGHMIMGLPLTILSIFGIIGLAGVVINNSLVMIDLYNE YLDKGHALRAAVIEGTKDRFRPILLTSLTTFLGVFPLIMETSLQAQFLIPLAVSIGYGVLFGTAIILLAVPAVFIAQARA FDLVARLFGAAAPQLPEPAPDPLPASRLASVRAAE
Sequences:
NA
Specific function: NA
COG id: COG0841
COG function: function code V; Cation/multidrug efflux pump
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA