Definition Dinoroseobacter shibae DFL 12 chromosome, complete genome.
Accession NC_009952
Length 3,789,584

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The map label for this gene is dnaE

Identifier: 159045497

GI number:

Start: 3117972

End: 3121466

Strand: Reverse

Name: dnaE

Synonym: Dshi_2957

Alternate gene names: NA

Gene position: NA

Preceding gene: 159045505

Following gene: 159045495

Centisome position: NA

GC content: NA

Gene sequence:

>3495_bases
ATGACCCAGCCCCCCCGATTCATCCATCTCCGCCTGCACACCGAATACTCCCTACTCGAAGGGGCCATGCGGCTGAAAAA
GCTGCCCGATCTCGTCGCCGCGGCCGAGATGCCCGCGATTGCGATCACCGACACCAACAACATGTTCGCCGCCCTGGAGG
CGTCGGAGGCTCTGTCCAAGGCCGGCATCCAGCCGATCATCGGCTGCCAGGTGGATGTCGCGTTCGACCCGGCCGCCCCG
GGCGAGCGTCCGCGCGCGCCTGCGCCCGTTGTCCTGCTGGCCCAGACCGAGGCGGGCTATGAAAACCTCATGGCGCTCAA
CACCTGTCTTTATGTGGACAAGGGCGGCCAGCTGCCCCAAATCACGGTGGAGGAACTCGCCGCCAATGGCAGCGACCTGA
TCTGCCTGACGGGCGGGCCGCGCGGCCCGTTGGGGCGGTTCCTGTCGGCAGGCCAAAGGCCCAAGGCACAGGCCCTGATG
GCGCGCCTGGCCGAGATCTTCGGCGACCGGCTCTATGTGGAGTTGCACCGCCACCCGGGCGATCCGCTCTGCGCCGAGAC
CGAGCCGGGGTTCCTCGATCTGGCCTACGACATGAACCTGCCGCTGGTGGCAACCAATGACGTCTATTTCCCCGACCCGG
GGATGTACGAGGCCCATGATGCCCTGATCTGCATCGCCGAGGGCGCTTATGTCGACCAGCAGGCCCCGCGCCGCCGCCTG
ACCGATCAGCATTACTTCAAGTCCCAGACCGAGATGGCGACGCTGTTCGCGGACCTGCCCGAGGCGTTGGAGAATACCAT
TGAGATCGCGCGCCGCTGCGCCTTCAAGGCCTTCAAGCGCGACCCGATCCTGCCACGCTTCGCCGAGGACGAGGTCGAGG
AACTGCGCCGCCAGTCCCGCGAAGGGCTCAAGGCGCGGCTCGCGGTGATCCCCCACGCGGCCCCGGTGGAAGAGTATGAA
AAGCGGCTGGAATTCGAGCTCGACATCATCGAGGGGATGGGGTTTCCCGGCTACTTCCTCATCGTGGCCGACTTCATCAA
ATGGGCCAAGGATCGCGGCATTCCCGTGGGGCCCGGGCGCGGCTCCGGCGCGGGCAGCCTTGTGGCCTATGCGCTGACGA
TCACCGATCTCGACCCGCTGCGCTACTCGCTCCTGTTCGAGCGCTTCCTGAACCCCGAGCGGATCTCGATGCCCGATTTC
GACATCGACTTCTGCATGGATCGCCGCGAAGAGGTGATCCACTACGTTCAGGAGAAATACGGCCGCGACAAGGTGGGCCA
GATCATCACCTTCGGCGCGCTTCTGTCAAAGGCCGCCGTGCGCGACGTCGGCCGGGTGCTGCAGATGCCCTACGGGCAGG
TGGACCGGCTGTCGAAGATGATCCCGGTCGAGGGCGTCAAGCCCGTCTCGATCGAGAAGGCGCTGAAGGACGAGCCGCGC
CTGGCCGAGGAGGCGAAAGCCGAGGAGGTCGTCGAGCGGCTGCTGAAATACGGCATGCAGGTCGAGGGGCTCTTGCGCAA
CGCCTCCACCCACGCCGCCGGGGTGGTGATCGGCGACCGGCCGCTCGACAAGCTCGTGCCGCTCTACCAGGATCCGCGGT
CGGACATGCCCGCCACCCAGTTCAACATGAAATGGGTGGAACAGGCGGGGCTGGTGAAGTTCGACTTCCTCGGGCTGAAA
ACCCTGACCGTGATCGAGAACGCGGTGAAGCTGATCCGGGCCACCGGGCGCGACCTGCATGTGGCCGCCGACGGCACTGA
ATTGTATTCTCCCGCGCCGGGCACCGAGAACGACATCAACGCGATCCCGCTGGATGACGAGGCGTCCTACAAACTTTATG
CCTCGGCCAAGACTGTCGCCGTGTTCCAGGTGGAAAGCACGGGCATGATGGACGCCCTGCGCCGGATGAAACCCACCTGC
ATCGAGGACATCATCGCGCTCGTGGCGCTCTATCGACCCGGCCCGATGGAGAACATCCCCAAGTATTGCGAGGTCAAGAA
CGGCCTGTCGGAGCGCGACCTGCTCCATCCGACCGTGGATCACATCCTCGACGAGACCCAGGGCATCATCGTATACCAGG
AACAGGTGATGCAGATCGCTCAGGAGATGGCGGGCTATTCCCTGGGCGGCGCGGACATGCTGCGCCGCGCGATGGGCAAG
AAGATCCAGGAGGCCATGGATGCCGAGCGGCCCAAGTTCCTGGCCGGGGCCGCCGAGAACGGCGTCGACAAGGACAAGGC
GCTGGAGGTCTGGCACCTCCTGGACAAGTTCGCCAATTACGGCTTCAACAAGTCCCACGCGGCAGCCTATGCGGTGGTCA
GCTACCAGACCGCCTGGCTGAAGGCGAACCACCCGGTGGAGTTCATGGCCGGGGTGATGAACTGCGATATCCACCTGACC
GACAAGCTGGCCGTCTATGCCGAAGAGGTCCGGCGCGGCCTGGGGCTTGAGATCGTGCCACCTTGCGTGAACCGCTCGCG
CGCGAGCTTCTCCGTCGCCGAGGGCAAGCTGGTCTACGGGCTCGGCGCGCTGAAGAACGTCGGAGCCGACGCGATGGAAC
TGGTGGTGACCGGGCGCGGCGACAAACCCTTCGCGACACTCTTTGACCTGGCGCGGCGGGTCGACCTGAAACGCGTCGGC
AAGCGCCCGCTGGAAATGCTGGCGCGTGCCGGGGCCTTCGACCAGCTCGACCCGAACCGCCGCCGCGTGTTCCAGAGCCT
CGACGGCCTTGTGGCCTACTCGGCCGCGATCCACGAACAACGCGCCTCGGCCCAGGTCTCGCTCTTCGGGGAGGCGGGAG
AGGATCTGCCCGAACCGCGCATCCTGCCCTGCGACGACTGGCTGCCCGCCGAGCGGCTGGCCGAGGAACACAAGGCGATC
GGCTTCTATCTCTCGGGCCACCCGCTGGACGACTACATGGGCGCGCTGAAACGCAAGGGCGTCGTCACGCTCGAAGCCCT
CGCGCGCAAGGTGGAAACCGGCGCCGCCGTGGCCAAGATCGCGGGCACCATCGCAGGCCGGCAGGAGCGGAAATCGGCCC
GCGGCAACCGGTTCGCCTTCGTGCAGGCCTCGGATCCCACGGGGCTCTACGAGGTGACGGTGTTCTCCGACACGCTTGAG
AAGGTCCGCGATCACCTCGAGACCGGCAAGAACGTGGTGATGCAGGTCGAAGCGACCCTGGAGGCGGATCAGCTGAAGCT
GCTCTGCCGGTCCGCCGCCCCCATCGACGACGCGGTGGCCGATGCGCGCGGCGCGATGATGGGCCTGCGCGTCTTCGTGG
AGGCCGAGGCCGCCCTGCCCAATATCGCGGGGCTTTTGGGCCGGATGGCCGAAGACCCGAGCATCCGTACCCGCGGCCCG
GTCACCCTGGCCCTGATCGATCCCGACCTGCCGGGCGAGGTCGACGTCCTGCTCGGCGAGGCCCTGCCCGTGAACCCGCA
GATCAAGGGCGCGCTCAAGAGCCTCGCCGGTGTCGCGCTGGTCGAGGAGATGTGA

Upstream 100 bases:

>100_bases
CCGGCAGCCCTCTGGGCCCAGGTTGGAATGACCCCTGCCGACGCGCATATCTCGCGGCAGGCTCTTGGCGGGCCACCAGA
TGTCGCGCTAGGGTCGCGGC

Downstream 100 bases:

>100_bases
GGGCGTGCCGCGCCCAGCCGGGGCAAAGCGGTTTGGAAACCGCTTCTTCGGCCCAGCTGCGCTAGGCCGATCCGTCCTGC
GGCCGGAGCCTCCGGCGGGG

Product: DNA polymerase III subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1164_residues
MTQPPRFIHLRLHTEYSLLEGAMRLKKLPDLVAAAEMPAIAITDTNNMFAALEASEALSKAGIQPIIGCQVDVAFDPAAP
GERPRAPAPVVLLAQTEAGYENLMALNTCLYVDKGGQLPQITVEELAANGSDLICLTGGPRGPLGRFLSAGQRPKAQALM
ARLAEIFGDRLYVELHRHPGDPLCAETEPGFLDLAYDMNLPLVATNDVYFPDPGMYEAHDALICIAEGAYVDQQAPRRRL
TDQHYFKSQTEMATLFADLPEALENTIEIARRCAFKAFKRDPILPRFAEDEVEELRRQSREGLKARLAVIPHAAPVEEYE
KRLEFELDIIEGMGFPGYFLIVADFIKWAKDRGIPVGPGRGSGAGSLVAYALTITDLDPLRYSLLFERFLNPERISMPDF
DIDFCMDRREEVIHYVQEKYGRDKVGQIITFGALLSKAAVRDVGRVLQMPYGQVDRLSKMIPVEGVKPVSIEKALKDEPR
LAEEAKAEEVVERLLKYGMQVEGLLRNASTHAAGVVIGDRPLDKLVPLYQDPRSDMPATQFNMKWVEQAGLVKFDFLGLK
TLTVIENAVKLIRATGRDLHVAADGTELYSPAPGTENDINAIPLDDEASYKLYASAKTVAVFQVESTGMMDALRRMKPTC
IEDIIALVALYRPGPMENIPKYCEVKNGLSERDLLHPTVDHILDETQGIIVYQEQVMQIAQEMAGYSLGGADMLRRAMGK
KIQEAMDAERPKFLAGAAENGVDKDKALEVWHLLDKFANYGFNKSHAAAYAVVSYQTAWLKANHPVEFMAGVMNCDIHLT
DKLAVYAEEVRRGLGLEIVPPCVNRSRASFSVAEGKLVYGLGALKNVGADAMELVVTGRGDKPFATLFDLARRVDLKRVG
KRPLEMLARAGAFDQLDPNRRRVFQSLDGLVAYSAAIHEQRASAQVSLFGEAGEDLPEPRILPCDDWLPAERLAEEHKAI
GFYLSGHPLDDYMGALKRKGVVTLEALARKVETGAAVAKIAGTIAGRQERKSARGNRFAFVQASDPTGLYEVTVFSDTLE
KVRDHLETGKNVVMQVEATLEADQLKLLCRSAAPIDDAVADARGAMMGLRVFVEAEAALPNIAGLLGRMAEDPSIRTRGP
VTLALIDPDLPGEVDVLLGEALPVNPQIKGALKSLAGVALVEEM

Sequences:
NA

Specific function: NA

COG id: COG0587

COG function: function code L; DNA polymerase III, alpha subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA