Definition Dinoroseobacter shibae DFL 12 chromosome, complete genome.
Accession NC_009952
Length 3,789,584

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Identifier: 159045489

GI number:

Start: 3109029

End: 3111326

Strand: Reverse

Name: Not Available

Synonym: Dshi_2949

Alternate gene names: NA

Gene position: NA

Preceding gene: 159045491

Following gene: 159045488

Centisome position: NA

GC content: NA

Gene sequence:

>2298_bases
ATGACACGCTTTTCCGCGCCGATCTCGGAGTCGATCTGGGACATGAAATACCGCTTCAAGGAGGCGGATGGGACGCCCAT
CGACGTGACGGTCGAGGACAGCTGGCGCCGGATCGCCCGGGCGCTTGCCTCTGTCGAGTCGGACCCGGCAGCATGGGAGC
CGAAGTTCTACGCCGCCCTGGAGGATTTCAAGTTCCTGCCCGCGGGCCGGATCACCGCCGGCGCGGGGACCGAGCGGTCG
GTGACCCTGTTCAACTGTTTCGTCATGGGCACGGTGCCGGACGACATGGGCGGGATCTTCGAGGGGCTGAAAGAGGCCGC
CCTGACCATGCAGCAGGGCGGCGGCATCGGCTACGATTTCTCGACGATCCGGCCCAAGGGCGCGGCGGTCAAGGGCGTGG
CGGCGGATGCCTCGGGGCCGCTGTCCTTCATGGATGTGTGGGACGCCATGTGCCGGACGATCATGTCCGCGGGCTCGCGG
CGCGGGGCGATGATGGCCACCATGCGCTGCGACCACCCGGATATCGAGGCGTTCATCGCCGCCAAATCCGACCCGGCGCG
GCTGCGGATGTTCAATGTCAGCGTGCTGGTCACCGACGCGTTCATGGAGGCGGTGAAGGCCGACGGCTCCTGGGACCTGG
TGTTCGACGGCAAGGTCTATCACACGGTCGAGGCCCGCGACCTGTGGAACAAGATCATGAAGGCGACCTTCGAGTATGCC
GAGCCCGGGGTGATCTTCATCGACCGGATCAATGCGGCCAACAACCTGAGCTATTGCGAGACCATCGCGGCGACGAACCC
CTGCGGCGAGCAGCCGCTGCCGCCCTATGGCGCCTGCCTTCTGGGGTCAATCAACCTTTCGCGGCTGATCTCGGATCCGT
TCGGGGAAGGCGCGGCACTGGACGAGGCGGCGCTGGAGGAGTTGGTCGCCACCGCAGTGCGAATGATGGACAACGTGGTC
GATGCCTCCCGCTTCCCGCTGGAGGCGCAGGCCGCCGAGGCCCGCGCCAAGCGCCGGATCGGGCTGGGGGTCACGGGGTT
GGCCGACGCGCTTCTGATGGTGGGGCTGCGCTATGGCTCCGAGGCAGCGGCGCGTCAGACCGAGCGCTGGTTGCACCGGA
TCGCCCGCGCCGCGTACCTGGCGTCGGTGCAACTGGCGACCGAAAAGGGCGCCTTTCCGCTCTTCGAGGCCGACGCCTAT
CTGCAGTCAGGCACGATGCAGACCATGGACGCCGACGTGCGCGCCGCGATTGCCGAGCACGGGATCCGCAACGCCCTGCT
GACCTCGATCGCGCCCACCGGCACGATCAGCCTCTATGCCGGCAACGTGTCCTCGGGGATCGAGCCGGTCTTTGCCTACA
GCTACACCCGCAAGGTGCTGCAAAAAGACGGCTCGCGCACCGAGGAAGAGGTGGTGGATTACGCCGTCCAGCTCTGGCGC
GAGAAGTTCGGCGATGCGGACCTGCCAGACCACTTCGTCAACGCCCAGACCCTGGCCCCGCTCGACCACGTCCGGATGCA
GGCGGCGGCGCAGAAATGGGTCGATTCGAGCATTTCCAAGACGATCAACTGCCCCGAGGATATCAGCTTCGCCGAGTTCA
AGGACGTCTACATGGCCGCCTGGGACCAGGGCTGCAAGGGCTGCACGACCTACCGCCCGAACGCCGTGACGGGCTCGGTG
CTGAGCGTGTCGGACAGCGCCACCAAGGACAGCGAGGCGGAAAAGGGCGAGGTCAAGCCGGTCTCCGAGGCGCGCCTCGA
CGGCGACGTGGTCTATATCTCCGAGCCGCTCGACCGGCCCAAGGCGCTGGAGGGGCAGACCTACAAGCTCAAATGGCCGC
TGACGGACCACGCGATCTACATCACCATCAACGACGTGATCATCAACGGCCATCGCCGCCCGTTCGAGGTGTTCATCAAC
TCCAAGAACATGGAGCATTTCGCCTGGACCGTGGCGCTCACGCGGATGATCTCGGCGGTGTTCCGGCGCGGGGGCGACGT
GTCCTTCGTGGTCGAAGAGCTCAAGGCCGTGTTCGACCCACGCGGCGGCGCCTGGATGGAAGGCAAGTATGTCCCCTCCA
TCCTCGCGGCCATCGGCGGGGTGATCGAGCGGCACATGATCGCCACGGGGTTTCTCGAAGGCGAGGGGATGGGCCTGAAG
ACCGACCCCCAGGCCGAGGTGATGGCCGTCGGCGAGGCGCCGCGCGGCCCGGCCTGCGCGAACTGCGGCAGCCATGCCCT
GCGCATGATCGAGGGATGCAACACCTGCGCCGATTGCGGCTTCTCCAAATGCGGCTGA

Upstream 100 bases:

>100_bases
CCTGCATATCGTAGTTTGATCGGCGGCATCTGCAACCTGTTGTGTATTTTGTGGTCTCTGGGCTATTGTAGAAGGCCGTT
CATCAGAAAGAATCGCTGCC

Downstream 100 bases:

>100_bases
CCGATCCGCGGCGACCAAGCGCCTTGCAAGGCGCTTGACAAGGCGATTGCAATCGCCTTGCGCCCGGCCCGCCCCGGGGG
CGACATTTTTCGCCGCAGCT

Product: putative Vitamin B12-dependent ribonucleotide reductase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>765_residues
MTRFSAPISESIWDMKYRFKEADGTPIDVTVEDSWRRIARALASVESDPAAWEPKFYAALEDFKFLPAGRITAGAGTERS
VTLFNCFVMGTVPDDMGGIFEGLKEAALTMQQGGGIGYDFSTIRPKGAAVKGVAADASGPLSFMDVWDAMCRTIMSAGSR
RGAMMATMRCDHPDIEAFIAAKSDPARLRMFNVSVLVTDAFMEAVKADGSWDLVFDGKVYHTVEARDLWNKIMKATFEYA
EPGVIFIDRINAANNLSYCETIAATNPCGEQPLPPYGACLLGSINLSRLISDPFGEGAALDEAALEELVATAVRMMDNVV
DASRFPLEAQAAEARAKRRIGLGVTGLADALLMVGLRYGSEAAARQTERWLHRIARAAYLASVQLATEKGAFPLFEADAY
LQSGTMQTMDADVRAAIAEHGIRNALLTSIAPTGTISLYAGNVSSGIEPVFAYSYTRKVLQKDGSRTEEEVVDYAVQLWR
EKFGDADLPDHFVNAQTLAPLDHVRMQAAAQKWVDSSISKTINCPEDISFAEFKDVYMAAWDQGCKGCTTYRPNAVTGSV
LSVSDSATKDSEAEKGEVKPVSEARLDGDVVYISEPLDRPKALEGQTYKLKWPLTDHAIYITINDVIINGHRRPFEVFIN
SKNMEHFAWTVALTRMISAVFRRGGDVSFVVEELKAVFDPRGGAWMEGKYVPSILAAIGGVIERHMIATGFLEGEGMGLK
TDPQAEVMAVGEAPRGPACANCGSHALRMIEGCNTCADCGFSKCG

Sequences:
NA

Specific function: NA

COG id: COG0209

COG function: function code F; Ribonucleotide reductase, alpha subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA