Definition Dinoroseobacter shibae DFL 12 chromosome, complete genome.
Accession NC_009952
Length 3,789,584

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 159044717

GI number:

Start: 2301398

End: 2302615

Strand: Reverse

Name: Not Available

Synonym: Dshi_2174

Alternate gene names: NA

Gene position: NA

Preceding gene: 159044718

Following gene: 159044716

Centisome position: NA

GC content: NA

Gene sequence:

>1218_bases
ATGAGCAACAGCGATCCCTCTGCCTTGCTCGCAGCAAAGACGGCCCCTGACGCCGTGGCGGACGGGGTGTCTCCGCTCGC
CGAAGTCACCGCAGAACTGAGTGCCTTCGTGCGCGAAGTCACGGCCCAGAAGGCCGAAATGAAATCCCGATTGAAACAAC
AAGAAGAGCGTCTCCTCATGCTTGACCGCAAATCTACTTCGTACGCGCGCCCCGCGCTGTCTGGTGCTGTTGCCGAAGCA
GCGCCCCATCAGAAGGCGTTCGACGCCTATCTGCGTTCCGGCGATGACGACGCGCTGCGTGGTCTGGAACTGGACGGCAA
GGCCATGTCCACGGCGGTGTCCGGCGAGGGCGGCTATCTCGTCGATCCGCAGACCTCCGAGACCGTGAAGAACGTCCTGA
AGTCCCAGGCCTCCCTGCGGGCGGTCGCACAGGTCGTGACGGTGGAAGCCACCAGCTATGATGTGCTGGTCGATCACACC
GAGGTCGGCACCGGCTGGGCGAGCGAGACCGGCAACCTGACCGAGACCGACACCCCGCAGATCGACCGGATCTCGATCCC
GCTGCACGAGCTTGCTGCCCTGCCGAAGGTCAGCCAGCGACTGCTGGATGATGCGGCGTTCGACATCGAGGCATGGCTGG
CTGAGCGCATCGCCGACAAGTTCGCCCGCTCGGAAGCGGCGGCCTTCGTCAACGGAGACGGCGCCGACAAGCCCAAGGGG
TTCCTTACCCATGACAGCGTCGACAACGATGTGTGGACCTGGGGCAATCTCGGCTACGTGGTCACCGGCTCGGATGGTGA
TTTCAACAGCGTGAGCCCCGCAGATGCGATCGTGGACCTGGTTTACGCGCTGGGCGCGCGCTACCGCGCCAATGCCAGCT
TCATCATGAACTCCAAGACCGCTGGTGTCGTGCGCAAGATCAAGGATGCCGATGGCCGGTTCCTGTGGTCGGACGGCCTT
GCCGCGGGGGAGCCGGCGCGTCTGCTGGGCTACCCGGTGCTGATCTCCGAGGACATGCCGGATATCGGCAGCGATGCCAC
GGCCATCGCCTTTGGCGATTTCGGCGCCGGCTACACCATCGCGGAGCGTCCGGACCTGCGCATCCTGCGCGATCCGTTCT
CGGCCAAGCCTCACGTTCTGTTCTACGCCACCAAGCGCGTGGGCGGGGATGTGAGCGATTTCGCGGCGATCAAACTGCTG
AAATTCGCGGTGAGCTAA

Upstream 100 bases:

>100_bases
TTGAGGATGACTGGCGTTCGTTGGCGGAGGCGCTGCGTGCGGCCCGCCTGGCGCTGGGCGATCAGGTCCCGGCGGAAACG
ACTTCGAAAAGGAGTGAAGA

Downstream 100 bases:

>100_bases
GGGTCTCTGATCCAACCGTGAATCTGTCCCGTCTTCGGGCGGGACAGTGGGCGCGTGTGGGGAAACGGCGTTGTCTAGCT
TCTTCCCTCCGTCCGAGTAG

Product: putative phage major capsid protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>405_residues
MSNSDPSALLAAKTAPDAVADGVSPLAEVTAELSAFVREVTAQKAEMKSRLKQQEERLLMLDRKSTSYARPALSGAVAEA
APHQKAFDAYLRSGDDDALRGLELDGKAMSTAVSGEGGYLVDPQTSETVKNVLKSQASLRAVAQVVTVEATSYDVLVDHT
EVGTGWASETGNLTETDTPQIDRISIPLHELAALPKVSQRLLDDAAFDIEAWLAERIADKFARSEAAAFVNGDGADKPKG
FLTHDSVDNDVWTWGNLGYVVTGSDGDFNSVSPADAIVDLVYALGARYRANASFIMNSKTAGVVRKIKDADGRFLWSDGL
AAGEPARLLGYPVLISEDMPDIGSDATAIAFGDFGAGYTIAERPDLRILRDPFSAKPHVLFYATKRVGGDVSDFAAIKLL
KFAVS

Sequences:
NA

Specific function: NA

COG id: COG4653

COG function: function code R; Predicted phage phi-C31 gp36 major capsid-like protein

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA