Definition Dinoroseobacter shibae DFL 12 chromosome, complete genome.
Accession NC_009952
Length 3,789,584

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Identifier: 159044509

GI number:

Start: 2057989

End: 2062884

Strand: Reverse

Name: Not Available

Synonym: Dshi_1962

Alternate gene names: NA

Gene position: NA

Preceding gene: 159044510

Following gene: 159044508

Centisome position: NA

GC content: NA

Gene sequence:

>4896_bases
ATGACAGCAGACGGTGCCCACACGCGCCACGCTGACAACGAACCGATTGCAATCGTAGGCATCGCCTCGATCTATCCCGA
GGCGCCGGACACGGCCACCTATTGGCGCAACATCACCGACAAGGTGGATGCGGTGGCCGATGCGCCGGCCGATTGGTGCG
CGGATCTGTTCTTTGACCCCGAGAGCGCGGATAACGACCGGATCTACACCAAGCGCGGTGGGTTCCTGCGCGATCTCGCG
GTGTTCGACCCGCTGCGCCACGGGGTCATGCCGACCTCCATCGACGGGGGGGAGCCGGACCAGTTCCTCGCGTTGCAGGT
GGCCGCCGACGCGGTGGAGGATGCCGGTTTCGCCGCGCGCCCCGTCCCCGGCGAACGGGTGGCGGTGATCCTGGGCCGCG
GCACCTATATCAACCGCGGCTTCACCAGCGTGGTGCAGCACGGGATCATGGTGGATCGCTTCCTGTCGATCCTGAAAAAG
CTCCATCCCGACACCGACGCGGAAGAGCTGGCCGAGGTCAAGGCGCAGCTCAAGGCCTCCCTGCCGCCCTTCAATGCGGA
AATGGCCCCGGCCCTGGTGCCGAACCTGGTGACGGGGCGGATCTCCAACCGGCTGGACTTCAAGGGCGCCAATTACATCG
TGGACGCGGCCTGCGCCTCGTCGCTCATCGCCATGGATCGCGGGGTTGCGGACCTGCGGGCGGGGCGGTGCGACATGGCG
GTGGTGGGCGGTGTGCATGCCTCCACCCCCGCACCGATCTACCAGATCTTCTGCCAGCTCGAAGCGCTGTCGCGGAAGGG
GTCGATCAAACCGTTCTCGGCCAATGCCGATGGCACGCTTCTGGGCGAGGGCGTCGGGCTGATGTGCATCAAGCGGCTTT
CCGATGCGGAGGCCGCGGGCGACCGGATCTACGCGCTGGTGCGCGGGGTCGGCGTGGCCAGCGACGGCAAGGGGCTGGGC
ATTCTCGCCCCCCGGATAGAGGGGGAGACACTCGCGCTCCAGCGCGCCTATGAGGATGCCGGGGTCGATCCGGCCACCGT
GGGTCTGATCGAGGCCCATGGCACGGCGACCGCCCTGGGCGACGCGACGGAGGTCGAGGCGCTCGTGGGCCTGATGGGGA
CGCGCGACAGCGACGCGCCGTCCTGCGCGCTGGGCTCGGTGAAGTCGATGATCGGGCATTGCCTGCCCGCCTCGGGCTCG
GCCGGAATCATCAAGACCGCGCTGGCGCTCTATCACAAGACCCTGCCGCCCACCTTGCTGGACGAGGCGAACCCTGAGTT
GGGGATCGAAGGCTCGCCGCTCTACCTGAACACCGAAACCCGACCCTGGATCCACGGGCTGGACACGCCCCGGCGGGCGG
GGGTGAACGCCTTCGGCTTCGGCGGGATCAATGCCCATACGGTGCTGGAAGAATATCGCGGCGGGGCGGAGCCTGCACCG
AACCTCACCCGGTCGAGCGAGCTTCTGGTGGCGGGCGCGCCGGATGCGTCGGGACTGAGCGCACGGCTGGAGGCGCTGAA
AACCGCGCTATCTGGCGACATGCCCCCGGCAGAGGTCGCGCGGGTCGAGAATGCCGCCCCGTGCCCCGGCCCCTGGCGCG
CGGCCATCGTGGCCCGGGACGCGGGCGATGCCATGGCCAAGATCGACAAGATCCTCGGCCGGATCGCCAGCGGCAAGGAC
CGGCTCAGGGATCGCAAGGGGGCGTATCTGAACGCGGCACCGCTGGCCGCCACGGGCAAGGTCGCCTTCATGTTCCCCGG
GGAGGGGAGCCAGCATCTGGGCATGCTGCGCGAGATCATGCTGCATTACCCCCGGATGCGGCAGTGGTTCGACCTGGTGG
ACGGGGCCTTCGCGGGCCATGGCCGCAACCTGCTGCCGAGCCAGGTGATCTTCCCGCCCCCCGGCACCGCCGAAGAGGGC
GGCGCGCTGTGGCGGATGGATATCGGGCCAGAGGCGATTTTCGCCGCAAATCAATCGGTTGCGGCGCTGTATGAAAGCAT
CGGCTTGCGCCCGGACATGCTGGTCGGCCATTCCACGGGGGAATACTCGGCGCTCTTTGCCGCCGGGGTGACGCGGCGCG
AAGATCCGGCCGTTCTCCAGGCGGAGATGCGCGCGCTCAACGCGGAATACGAGGCGATGGCGGCCGAGGGGCTGATCGCC
GAGGGCGCGCTGGTGGCGCTCGGCGCGGTGGATGGCGCGGCGCTGGAGGACAAGCTGGCCGGGCGCGACGATGTTTATCT
GGCCATGGACAACTGCCCCAACCAGAAGGTCGTGGCGGCGTTTTCCGACGCGGGCCGCGACTATGCCCTGAGCCTCGCGC
CCGCGCTGGGCGGGTTCGACGAGCTCTTGCCGTTCTCGCGCGCCTATCACAGCCCGGCCTTCGCACCGTTCAGCGCGCGG
CTCGAAGGGTTCCTCGCGGGGATGCAGGTCGCGGCCCCCGAACGCCCGGTCTATTCCTGCCTGAGCACCGCGCCCTTTCC
AGACTCGCCCGACGCGATCCGCAAGCTGACCGCCGACCAATGGTCCGGGCGGGTGCGTTTCGTCGAGACGGTGGAGCGGA
TGTATGCGGACGGGGCGCGGGTCTTCGTCGAATGCGGGCCGCGCAACAACCTGTCGGCCTTCGTGAACGACATCCTGCGC
GGGCGCGATCATGTGGCGGTGGCGGTGGACACGCCGTCCTTGCAGGGGCTCGACCAGCTGCACCACATGGCCGCCCAGCT
GGTGGTGGAGGGGGTGACGCTCGACCTCGGCGCGCTGGCGGCCCCGGTGCGGGCGGTGGCGAAGCCGGCCGGTCCGAGCC
GTCCGCAGGTGCTCAAGATGGGGGTGCAGCCCATGGATATCGCGTCGGTTCCCAAGCGGGCGCAGAGCGCGCCGTCCAAG
GCACCGCCCGCGCCGAAACCCGCCCCCGCGGCACCGCCCCCCGCCGCGTCGCAAACCCGTCCCACCGCCAACTCGCCCGC
CGCCCCGACACCGCCGAAGATGCCGGTGACGGTCGCCGCGGCACCCCGGCCGCAGCCCGCGCCCGCCGCGCCCCCGGCAG
AGGCCGAAGCGGTGGTCGACGCCTATTTCGACACGCTGGAGGGCTTCCTCGCCTCCGAGACCGAGATCATGGCCGCCTAT
CTCGGCACGGTGCCGGGACAGGCGGACGCGGCCCCCACGCCCATGCCCACTCCACAGACCCAAGCGCCCCGGCGGTTCCC
GATGCTCGGGGCGGTGACCCCGGCCCCCGACGGTCGCAGCCTGACCGCCCGGATCGAGATCGACCCGGCCCGCGCGCCCT
ACCTGCGCGATCACAGCTTCGGCCACGGCATTTCCCAGCGCGACCCGGAGCTGACCGGCCTGCCGGTGGTGCCGCTGACC
TTCTCGATGGAGGCGCTGGCCGAGGCCGCCGCGGCCCTGCGCCCGGACCTGGTGGTGACGGGGATGCGGGAGGTGCGCGC
CTCGCGCTGGTTCGCCCTGGATCGCCCGCCCCTGGTGGTGGAGGCTGCGGCGGAACTGCGCGAAGAGGGGCCCGTGACCG
TGGTGCGCGTGCGGATCCGCGCCGCCGATGGCCCGGCGCTGCGCCCGACCCTGATCGAGGCGGATGTGACCCTGGCCCAA
GCGCGCCCGGAGGCGCCCCTGGCCCAGCCCCAGAGCTATGGCGCCCTGCGCGACGCGCCCTGGTCGCTTGCGGATGTCTA
CGGCAAGATCATGTTCCACGGTCCCAAGCTGCAGGCGGTGGAGGCCATGGATGTGGTCGGCGCAGGCGGGGTGGAAGGCA
CCCTGATCGGGCTGCCCCATGACGCGCTCTATGCCGGGGTCGCCGACCCGGGCTTCGAGACCGACGCGATCACCCTTGAC
GCGGTGGGCCAGCTGGTCGGCGTCTGGTCGGCGGAAATGCTGCCCGAGGCGTTCCACATCTTCCCCTTCCGGGTCGAGGC
GCTGGAGATCTTCCGCGACCGCCTCGCCCCCGGCGAGCGCGCGCGCTGCCGCGCGACCATCGATCTGGTGGGCGCGGACG
AGATGCGCGCCGATATCGACGTGGTCTCGGCCGACGGGCGGCTGCAATGCCGGATCGCGGGCTGGTGGGACAAGCGGTTC
AACCTGCCCGAGCGGTTCTTCCGGGCCCGGCTCGACCCGCCGCGCAATCCGCTCTCGGCGCCCATCGTGCTGCCGGGGGG
CGCGCCGTTGCCCGAGGGCTGCGCGCTGCAGCTCTGTGACGAGATCGGTGACGATCTGCTGGACGGCTCCGGTGGGATCT
GGGCCAAGGTGCTGGCGGGGCTTGTCCTGTCCCGGGCCGAGCGGGCGGAATTCGCCGCCATGGACGGGGCCACGGACAAG
CGGCGCTGGGAATGGCTGCGCGGGCGCGCGGCGGCCAAGGATGCGGCCCGCGCGGTGCTGGGCCGCGCGCTCGCGCCCGC
GGACATTCCCCTGGTCGTGCCGGGGGAGGATGCAGGCCCGGTGATCGACCCGACCCTGCCGCCCGCCTGGGGGCCTGCGC
CGCTTATCTCGATCGCCCACAAGGGTGCGCGCGCCCTGGGCCTGGCGGCCGATCCGCGCCGCTATGCCGGGGTGGGCGTG
GATCTCGAAGAGATCGCGCCGCGCACGCCCGCGTTCCTGCAGACCGCCTTCACCCCCGCCGAGCGCGCCTCGATCATGGC
CCTGCCCGAAGGACAGCCGCGCGATACGGCAGCGACCCGCTATTGGTGCGCAAAGGAAGCAGTCGGCAAAAGCTTCGGGC
TCGGCCTCGCCCAGGCCCTTGATCGTTTCGAGGTTCAGGGTGATGGAACGGACGCCCCGCCCGTGATTGTTCGGGATCTG
TCAACACACACCGATATTGCGGTGACCGCGATGGCCGAGCTTGCGCCGGGCCTGATCGCCGCCGTCGTGCTCAGACCGCA
GGACGCAGGAAATTGA

Upstream 100 bases:

>100_bases
CGAGCGCCCCGGAGGTGGTTTGGGGACGCGGCCCGTGGGAGACGGATGCGGAGACCTACGCCCGCACCTACGGCGCAGGC
GGCACCAGAGAGGCGGCGGA

Downstream 100 bases:

>100_bases
AAGGCCAGAGGATAAAACCATGACACCCGTGAGCTATGATGACGCCTACAAGGTGATGCAGGAGATTTTCGAGGATCTTG
CCGACGACCTGGGCGAGGAC

Product: putative modular PKS system

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1631_residues
MTADGAHTRHADNEPIAIVGIASIYPEAPDTATYWRNITDKVDAVADAPADWCADLFFDPESADNDRIYTKRGGFLRDLA
VFDPLRHGVMPTSIDGGEPDQFLALQVAADAVEDAGFAARPVPGERVAVILGRGTYINRGFTSVVQHGIMVDRFLSILKK
LHPDTDAEELAEVKAQLKASLPPFNAEMAPALVPNLVTGRISNRLDFKGANYIVDAACASSLIAMDRGVADLRAGRCDMA
VVGGVHASTPAPIYQIFCQLEALSRKGSIKPFSANADGTLLGEGVGLMCIKRLSDAEAAGDRIYALVRGVGVASDGKGLG
ILAPRIEGETLALQRAYEDAGVDPATVGLIEAHGTATALGDATEVEALVGLMGTRDSDAPSCALGSVKSMIGHCLPASGS
AGIIKTALALYHKTLPPTLLDEANPELGIEGSPLYLNTETRPWIHGLDTPRRAGVNAFGFGGINAHTVLEEYRGGAEPAP
NLTRSSELLVAGAPDASGLSARLEALKTALSGDMPPAEVARVENAAPCPGPWRAAIVARDAGDAMAKIDKILGRIASGKD
RLRDRKGAYLNAAPLAATGKVAFMFPGEGSQHLGMLREIMLHYPRMRQWFDLVDGAFAGHGRNLLPSQVIFPPPGTAEEG
GALWRMDIGPEAIFAANQSVAALYESIGLRPDMLVGHSTGEYSALFAAGVTRREDPAVLQAEMRALNAEYEAMAAEGLIA
EGALVALGAVDGAALEDKLAGRDDVYLAMDNCPNQKVVAAFSDAGRDYALSLAPALGGFDELLPFSRAYHSPAFAPFSAR
LEGFLAGMQVAAPERPVYSCLSTAPFPDSPDAIRKLTADQWSGRVRFVETVERMYADGARVFVECGPRNNLSAFVNDILR
GRDHVAVAVDTPSLQGLDQLHHMAAQLVVEGVTLDLGALAAPVRAVAKPAGPSRPQVLKMGVQPMDIASVPKRAQSAPSK
APPAPKPAPAAPPPAASQTRPTANSPAAPTPPKMPVTVAAAPRPQPAPAAPPAEAEAVVDAYFDTLEGFLASETEIMAAY
LGTVPGQADAAPTPMPTPQTQAPRRFPMLGAVTPAPDGRSLTARIEIDPARAPYLRDHSFGHGISQRDPELTGLPVVPLT
FSMEALAEAAAALRPDLVVTGMREVRASRWFALDRPPLVVEAAAELREEGPVTVVRVRIRAADGPALRPTLIEADVTLAQ
ARPEAPLAQPQSYGALRDAPWSLADVYGKIMFHGPKLQAVEAMDVVGAGGVEGTLIGLPHDALYAGVADPGFETDAITLD
AVGQLVGVWSAEMLPEAFHIFPFRVEALEIFRDRLAPGERARCRATIDLVGADEMRADIDVVSADGRLQCRIAGWWDKRF
NLPERFFRARLDPPRNPLSAPIVLPGGAPLPEGCALQLCDEIGDDLLDGSGGIWAKVLAGLVLSRAERAEFAAMDGATDK
RRWEWLRGRAAAKDAARAVLGRALAPADIPLVVPGEDAGPVIDPTLPPAWGPAPLISIAHKGARALGLAADPRRYAGVGV
DLEEIAPRTPAFLQTAFTPAERASIMALPEGQPRDTAATRYWCAKEAVGKSFGLGLAQALDRFEVQGDGTDAPPVIVRDL
STHTDIAVTAMAELAPGLIAAVVLRPQDAGN

Sequences:
NA

Specific function: NA

COG id: COG3321

COG function: function code Q; Polyketide synthase modules and related proteins

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA