| Definition | Dinoroseobacter shibae DFL 12 chromosome, complete genome. |
|---|---|
| Accession | NC_009952 |
| Length | 3,789,584 |
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The map label for this gene is nrdJ
Identifier: 159044334
GI number:
Start: 1854290
End: 1857964
Strand: Reverse
Name: nrdJ
Synonym: Dshi_1785
Alternate gene names: NA
Gene position: NA
Preceding gene: 159044336
Following gene: 159044332
Centisome position: NA
GC content: NA
Gene sequence:
>3675_bases ATGAAAATCGAACGCCATTTCACCAAAGATGGAACTGACGCTTACGCCGGGATCGAGTTCTCGATCACCGCGTCCGAAAT TCGCAACCCCGATGGTACCGTGGTGTTCCGGCTCGACGAGGTCGAAGTGCCCAGCTCCTGGAGCCAGGTCGCCTCGGACG TGATCGCGCAGAAATACTTCCGCAAGGCCGGCGTTCCCGCCGCCCTGAAGCCCGTGCGCGAAAAGGGCGTGCCGGAATTC CTGTGGCGCTCGGTGGCAGACGAGGCCGCGCTCGCCAAGCTGCCCGCAGAGAAACGCTATGGCGGCGAAACCTCCGCCCG CCAGGTGTTCCGCCGTCTGGCAGGCGCCTGGGCCTATTGGGGCTGGAAGGGGGGCTATTTCTCCACCGAGGCCGATGCCC GCACCTATTTCGACGAGATGCAGCTGATGCTGGCGCGCCAGATGGCCGCGCCGAACAGCCCGCAATGGTTCAACACCGGC CTGCACTGGGCCTACGGCATCGACGGTCCCGCGCAGGGCCACTACTACGTGGATCACAAGTCCGGCAAACTGACCAAATC CACATCGTCCTACGAGCACCCGCAGCCCCATGCCTGCTTCATCCAGTCCGTCGCCGACGACCTGGTGAATGATGGCGGCA TCATGGACCTGTGGGTCCGCGAGGCGCGGCTTTTCAAATACGGCTCCGGCACCGGCACGAATTTCTCCTCCCTTCGTGCC GAAGGAGAGGCTCTGTCAGGCGGGGGTAAGTCCTCCGGCCTGATGGGGTTCCTCAAGATCGGAGACCGGGCCGCAGGGGC CATCAAGTCCGGTGGCACCACACGCCGGGCAGCGAAGATGGTGATCTGCGACGCCGATCACCCCGATATCGAGGAATTCG TGAACTGGAAGGTGAAGGAGGAGCAGAAGGTCGCCTCCCTCGTCGCCGGCTCGAAAATGCACGAGGCCAAGCTGAACGAG ATTTTCGCCGCGATCGGCGAATGGGACGGGCTGGGCGAGGACGCGGTGGACCCCACCAAGAACGCTGCGCTGAAATCCGC GATCCGGGCCGCCAAGAAGGTGCAGATCCCCGAGACCTACATCAAGCGGGTGCTGGATTACGCCAAGCAGGGCTATGCCT CCATCGAGTTTCCGACCTATGATACCGACTGGGATTCCGAGGCGTATAACTCGGTCTCCGGGCAGAACTCCAACAACTCC GTGCGCGTGACCGACGCCTTCCTGAAGGCCGTCAAAGACGACGCGGATTGGGAGCTGATCCGCCGCACCGACGGCAAGGT CGCCAAGACCATCAAGGCGCGCGAGCTGTGGGAAACCATCGGCCACGCGGCCTGGGCCTGCGCCGATCCCGGCATCCAGT TCCACGACACCGTCAACGACTGGCACACCTGCCCCGAGGATGGCGCGATCCGCGGCTCCAACCCGTGCTCGGAATACATG TTCCTTGACGATACCGCCTGCAACCTGGCGTCGATGAACCTGCTGACCTTCTACCGCGACGGCAAGTTCGACAGCGAAGG CTACATGCACGCGGCGCGGCTCTGGACCCTGACCCTGGAAATCTCGGTGCTCATGGCGCAGTTCCCGTCCAAGGAAATCG CGCAGCGCTCCTACGACTTCCGCACCCTCGGTCTCGGCTATGCCAATATCGGCGGGCTGCTGATGAACATGGGCTACGGC TATGACAGCGACGAAGGAAGGGCGCTCTGCGGGGCGCTGACCGCGATCATGACCGGGGTGAGCTATGCCACCTCCGCCGA GATCGCTGCAGAGGTCGGGCCGTTCCCGGGTTATGCCAAGAACGCCGATCACATGCTCCGCGTGATCCGCAACCACCGCA ACGCGGCCTATGGCAAGACCGACGGCTACGAGGCGCTCGCGACGAAACCCGTCGCGCTGGACCATGCCAACTGCCCGGAC CAGACGCTGGTGAAACTCGCCATGTCCTCCTGGGATGAGGCGCTGAAGCTGGGCGAGCAGCACGGGTATCGCAATGCGCA AGCCACGGTGATCGCACCCACGGGCACCATCGGTCTGGTAATGGATTGCGACACCACCGGCATCGAGCCGGACTTCGCCC TGGTGAAGTTCAAGAAGCTCGCGGGCGGCGGCTACTTCAAGATCATCAACCGCTCGGTCCCCGCGGCGCTGGACACGCTG GGCTACAGCTCGGCCCAGATCGAAGAGATCATCGCCTATGCGGTTGGCCACGGCACGCTCGGCAATGCGCCCGGCGTGAA CCACACCGCCCTGATCGGCCACGGCTTCGGGCCTGAGCAGATCGAGAAGATCGAGGCGGCGCTGCCTTCGGCCTTCGACA TCCGGTTCGTGTTCAACCAGTGGACCCTGGGCGAGGCGTTCTGCACCGAGGTGCTGGGCATTCCCGCGGCGAAACTGAAC GATCCGACCTTCGACATGCTGCGGCACCTGGGTTTCGCGAAGAAAGACATCGATCTGGCCAACGATCATGTCTGCGGGAC CATGACGCTGGAGGGCGCGCCCTTCCTGAAAGCCGAACACTACTCGGTCTTCGACTGCGCCAACCCCTGCGGCAAGCGCG GCAAGCGGTTCCTGTCGGTGGACAGCCACATTCACATGATGGCCGCGGCGCAGAGCTTCATCTCGGGCGCGATCTCGAAG ACGATCAACATGCCCAACGATGCCACGATCGAGGATTGCCAGAAGGCCTATGAGCTGAGCTGGTCGCTGGGCACCAAGGC CAACGCGCTCTACCGCGACGGCTCCAAACTCAGCCAGCCGCTCGCTGCGGCCCTTGTGGAGGATGACGAGGAGGCCGCGG AGGTTCTGGAAACCGGCTCCACCATGGAAAAGGCCCAGGTCATCGCCGAGAAGATCGTCGAGAAGGTGGTCATCAAGGAG GTCATCAAGGCCCACCGCGAAAAGCTGCCCGAGCGGCGCAAGGGTTATACCCAGAAGGCCATCGTGGGCGGACACAAGGT TTATCTGCGCACGGGCGAGTATGCCGACGGCAACCTCGGCGAGATCTTCATCGACATGCACAAGGAAGGCGCGGGCTTCC GGGCGATGATGAACAACTTCGCCATCGCGGTCTCGGTCGGCCTGCAATACGGCGTGCCGCTGGAGGAGTTCGTGGATGCC TTCACCTTCACCAAGTTCGAGCCCGCGGGCATGGTGCAGGGCAATGACAGCATCAAGAACGCCACCTCGATCCTGGATTA CATCTTCCGCGAGCTGGCGGTGAGCTATCTCGACCGCACGGATCTGGCCCATGTGGCGCCCCAGGGCGCGACCTTCGACG ATATCGGCCGGGGCGAGGAAGAGGGGGTCTCCAACGTCAAGGAGATGTCCGACAGTGCGGCCAGCAAGTCGCTGGAGGTG CTCAAGCAGATCAGCTCGACCGGGTATCTGCGCAAGCGGATGCCGCAGGAGTTGGTGGTGCTGCAGGGCGGGGGCAAGCC GGTGACGGCGGAGATCCCGGTCGTCGGCACGATCGGTGGCGGCGAGGTGGCGACGATGACCGCGCTTCGCAGCGAAACGA CCGTGGCCACGACGACGTCGATCGACCCGCGCGCCAAGGCCAAGATGCAGGGCTACGAGGGCGAGGCCTGCGGCGAGTGC GGCAACTACACGCTGGTGCGCAACGGCACCTGCATGAAGTGCAACACCTGCGGGGGTACGTCGGGATGCAGCTAG
Upstream 100 bases:
>100_bases GCCGGACCCGGCTGGCTTGGTCTCCTCCGCACGAGATCACATCGGCACGGGCGGACCAACCGCATGGCCGGGAAACGAAA ATGGCCAACATGGGGCAGAC
Downstream 100 bases:
>100_bases AGATCCAAGCACCGGATGGAGCGACTGCTTCGATGCAACTCGCGGAAGGGAGGGTTACTGTTCCGCTCGACTTCATCGCT TCACACGCTCGGCACGGAGG
Product: ribonucleotide-diphosphate reductase subunit alpha
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1224_residues MKIERHFTKDGTDAYAGIEFSITASEIRNPDGTVVFRLDEVEVPSSWSQVASDVIAQKYFRKAGVPAALKPVREKGVPEF LWRSVADEAALAKLPAEKRYGGETSARQVFRRLAGAWAYWGWKGGYFSTEADARTYFDEMQLMLARQMAAPNSPQWFNTG LHWAYGIDGPAQGHYYVDHKSGKLTKSTSSYEHPQPHACFIQSVADDLVNDGGIMDLWVREARLFKYGSGTGTNFSSLRA EGEALSGGGKSSGLMGFLKIGDRAAGAIKSGGTTRRAAKMVICDADHPDIEEFVNWKVKEEQKVASLVAGSKMHEAKLNE IFAAIGEWDGLGEDAVDPTKNAALKSAIRAAKKVQIPETYIKRVLDYAKQGYASIEFPTYDTDWDSEAYNSVSGQNSNNS VRVTDAFLKAVKDDADWELIRRTDGKVAKTIKARELWETIGHAAWACADPGIQFHDTVNDWHTCPEDGAIRGSNPCSEYM FLDDTACNLASMNLLTFYRDGKFDSEGYMHAARLWTLTLEISVLMAQFPSKEIAQRSYDFRTLGLGYANIGGLLMNMGYG YDSDEGRALCGALTAIMTGVSYATSAEIAAEVGPFPGYAKNADHMLRVIRNHRNAAYGKTDGYEALATKPVALDHANCPD QTLVKLAMSSWDEALKLGEQHGYRNAQATVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRSVPAALDTL GYSSAQIEEIIAYAVGHGTLGNAPGVNHTALIGHGFGPEQIEKIEAALPSAFDIRFVFNQWTLGEAFCTEVLGIPAAKLN DPTFDMLRHLGFAKKDIDLANDHVCGTMTLEGAPFLKAEHYSVFDCANPCGKRGKRFLSVDSHIHMMAAAQSFISGAISK TINMPNDATIEDCQKAYELSWSLGTKANALYRDGSKLSQPLAAALVEDDEEAAEVLETGSTMEKAQVIAEKIVEKVVIKE VIKAHREKLPERRKGYTQKAIVGGHKVYLRTGEYADGNLGEIFIDMHKEGAGFRAMMNNFAIAVSVGLQYGVPLEEFVDA FTFTKFEPAGMVQGNDSIKNATSILDYIFRELAVSYLDRTDLAHVAPQGATFDDIGRGEEEGVSNVKEMSDSAASKSLEV LKQISSTGYLRKRMPQELVVLQGGGKPVTAEIPVVGTIGGGEVATMTALRSETTVATTTSIDPRAKAKMQGYEGEACGEC GNYTLVRNGTCMKCNTCGGTSGCS
Sequences:
NA
Specific function: NA
COG id: COG0209
COG function: function code F; Ribonucleotide reductase, alpha subunit
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA