Definition Dinoroseobacter shibae DFL 12 chromosome, complete genome.
Accession NC_009952
Length 3,789,584

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The map label for this gene is nrdJ

Identifier: 159044334

GI number:

Start: 1854290

End: 1857964

Strand: Reverse

Name: nrdJ

Synonym: Dshi_1785

Alternate gene names: NA

Gene position: NA

Preceding gene: 159044336

Following gene: 159044332

Centisome position: NA

GC content: NA

Gene sequence:

>3675_bases
ATGAAAATCGAACGCCATTTCACCAAAGATGGAACTGACGCTTACGCCGGGATCGAGTTCTCGATCACCGCGTCCGAAAT
TCGCAACCCCGATGGTACCGTGGTGTTCCGGCTCGACGAGGTCGAAGTGCCCAGCTCCTGGAGCCAGGTCGCCTCGGACG
TGATCGCGCAGAAATACTTCCGCAAGGCCGGCGTTCCCGCCGCCCTGAAGCCCGTGCGCGAAAAGGGCGTGCCGGAATTC
CTGTGGCGCTCGGTGGCAGACGAGGCCGCGCTCGCCAAGCTGCCCGCAGAGAAACGCTATGGCGGCGAAACCTCCGCCCG
CCAGGTGTTCCGCCGTCTGGCAGGCGCCTGGGCCTATTGGGGCTGGAAGGGGGGCTATTTCTCCACCGAGGCCGATGCCC
GCACCTATTTCGACGAGATGCAGCTGATGCTGGCGCGCCAGATGGCCGCGCCGAACAGCCCGCAATGGTTCAACACCGGC
CTGCACTGGGCCTACGGCATCGACGGTCCCGCGCAGGGCCACTACTACGTGGATCACAAGTCCGGCAAACTGACCAAATC
CACATCGTCCTACGAGCACCCGCAGCCCCATGCCTGCTTCATCCAGTCCGTCGCCGACGACCTGGTGAATGATGGCGGCA
TCATGGACCTGTGGGTCCGCGAGGCGCGGCTTTTCAAATACGGCTCCGGCACCGGCACGAATTTCTCCTCCCTTCGTGCC
GAAGGAGAGGCTCTGTCAGGCGGGGGTAAGTCCTCCGGCCTGATGGGGTTCCTCAAGATCGGAGACCGGGCCGCAGGGGC
CATCAAGTCCGGTGGCACCACACGCCGGGCAGCGAAGATGGTGATCTGCGACGCCGATCACCCCGATATCGAGGAATTCG
TGAACTGGAAGGTGAAGGAGGAGCAGAAGGTCGCCTCCCTCGTCGCCGGCTCGAAAATGCACGAGGCCAAGCTGAACGAG
ATTTTCGCCGCGATCGGCGAATGGGACGGGCTGGGCGAGGACGCGGTGGACCCCACCAAGAACGCTGCGCTGAAATCCGC
GATCCGGGCCGCCAAGAAGGTGCAGATCCCCGAGACCTACATCAAGCGGGTGCTGGATTACGCCAAGCAGGGCTATGCCT
CCATCGAGTTTCCGACCTATGATACCGACTGGGATTCCGAGGCGTATAACTCGGTCTCCGGGCAGAACTCCAACAACTCC
GTGCGCGTGACCGACGCCTTCCTGAAGGCCGTCAAAGACGACGCGGATTGGGAGCTGATCCGCCGCACCGACGGCAAGGT
CGCCAAGACCATCAAGGCGCGCGAGCTGTGGGAAACCATCGGCCACGCGGCCTGGGCCTGCGCCGATCCCGGCATCCAGT
TCCACGACACCGTCAACGACTGGCACACCTGCCCCGAGGATGGCGCGATCCGCGGCTCCAACCCGTGCTCGGAATACATG
TTCCTTGACGATACCGCCTGCAACCTGGCGTCGATGAACCTGCTGACCTTCTACCGCGACGGCAAGTTCGACAGCGAAGG
CTACATGCACGCGGCGCGGCTCTGGACCCTGACCCTGGAAATCTCGGTGCTCATGGCGCAGTTCCCGTCCAAGGAAATCG
CGCAGCGCTCCTACGACTTCCGCACCCTCGGTCTCGGCTATGCCAATATCGGCGGGCTGCTGATGAACATGGGCTACGGC
TATGACAGCGACGAAGGAAGGGCGCTCTGCGGGGCGCTGACCGCGATCATGACCGGGGTGAGCTATGCCACCTCCGCCGA
GATCGCTGCAGAGGTCGGGCCGTTCCCGGGTTATGCCAAGAACGCCGATCACATGCTCCGCGTGATCCGCAACCACCGCA
ACGCGGCCTATGGCAAGACCGACGGCTACGAGGCGCTCGCGACGAAACCCGTCGCGCTGGACCATGCCAACTGCCCGGAC
CAGACGCTGGTGAAACTCGCCATGTCCTCCTGGGATGAGGCGCTGAAGCTGGGCGAGCAGCACGGGTATCGCAATGCGCA
AGCCACGGTGATCGCACCCACGGGCACCATCGGTCTGGTAATGGATTGCGACACCACCGGCATCGAGCCGGACTTCGCCC
TGGTGAAGTTCAAGAAGCTCGCGGGCGGCGGCTACTTCAAGATCATCAACCGCTCGGTCCCCGCGGCGCTGGACACGCTG
GGCTACAGCTCGGCCCAGATCGAAGAGATCATCGCCTATGCGGTTGGCCACGGCACGCTCGGCAATGCGCCCGGCGTGAA
CCACACCGCCCTGATCGGCCACGGCTTCGGGCCTGAGCAGATCGAGAAGATCGAGGCGGCGCTGCCTTCGGCCTTCGACA
TCCGGTTCGTGTTCAACCAGTGGACCCTGGGCGAGGCGTTCTGCACCGAGGTGCTGGGCATTCCCGCGGCGAAACTGAAC
GATCCGACCTTCGACATGCTGCGGCACCTGGGTTTCGCGAAGAAAGACATCGATCTGGCCAACGATCATGTCTGCGGGAC
CATGACGCTGGAGGGCGCGCCCTTCCTGAAAGCCGAACACTACTCGGTCTTCGACTGCGCCAACCCCTGCGGCAAGCGCG
GCAAGCGGTTCCTGTCGGTGGACAGCCACATTCACATGATGGCCGCGGCGCAGAGCTTCATCTCGGGCGCGATCTCGAAG
ACGATCAACATGCCCAACGATGCCACGATCGAGGATTGCCAGAAGGCCTATGAGCTGAGCTGGTCGCTGGGCACCAAGGC
CAACGCGCTCTACCGCGACGGCTCCAAACTCAGCCAGCCGCTCGCTGCGGCCCTTGTGGAGGATGACGAGGAGGCCGCGG
AGGTTCTGGAAACCGGCTCCACCATGGAAAAGGCCCAGGTCATCGCCGAGAAGATCGTCGAGAAGGTGGTCATCAAGGAG
GTCATCAAGGCCCACCGCGAAAAGCTGCCCGAGCGGCGCAAGGGTTATACCCAGAAGGCCATCGTGGGCGGACACAAGGT
TTATCTGCGCACGGGCGAGTATGCCGACGGCAACCTCGGCGAGATCTTCATCGACATGCACAAGGAAGGCGCGGGCTTCC
GGGCGATGATGAACAACTTCGCCATCGCGGTCTCGGTCGGCCTGCAATACGGCGTGCCGCTGGAGGAGTTCGTGGATGCC
TTCACCTTCACCAAGTTCGAGCCCGCGGGCATGGTGCAGGGCAATGACAGCATCAAGAACGCCACCTCGATCCTGGATTA
CATCTTCCGCGAGCTGGCGGTGAGCTATCTCGACCGCACGGATCTGGCCCATGTGGCGCCCCAGGGCGCGACCTTCGACG
ATATCGGCCGGGGCGAGGAAGAGGGGGTCTCCAACGTCAAGGAGATGTCCGACAGTGCGGCCAGCAAGTCGCTGGAGGTG
CTCAAGCAGATCAGCTCGACCGGGTATCTGCGCAAGCGGATGCCGCAGGAGTTGGTGGTGCTGCAGGGCGGGGGCAAGCC
GGTGACGGCGGAGATCCCGGTCGTCGGCACGATCGGTGGCGGCGAGGTGGCGACGATGACCGCGCTTCGCAGCGAAACGA
CCGTGGCCACGACGACGTCGATCGACCCGCGCGCCAAGGCCAAGATGCAGGGCTACGAGGGCGAGGCCTGCGGCGAGTGC
GGCAACTACACGCTGGTGCGCAACGGCACCTGCATGAAGTGCAACACCTGCGGGGGTACGTCGGGATGCAGCTAG

Upstream 100 bases:

>100_bases
GCCGGACCCGGCTGGCTTGGTCTCCTCCGCACGAGATCACATCGGCACGGGCGGACCAACCGCATGGCCGGGAAACGAAA
ATGGCCAACATGGGGCAGAC

Downstream 100 bases:

>100_bases
AGATCCAAGCACCGGATGGAGCGACTGCTTCGATGCAACTCGCGGAAGGGAGGGTTACTGTTCCGCTCGACTTCATCGCT
TCACACGCTCGGCACGGAGG

Product: ribonucleotide-diphosphate reductase subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1224_residues
MKIERHFTKDGTDAYAGIEFSITASEIRNPDGTVVFRLDEVEVPSSWSQVASDVIAQKYFRKAGVPAALKPVREKGVPEF
LWRSVADEAALAKLPAEKRYGGETSARQVFRRLAGAWAYWGWKGGYFSTEADARTYFDEMQLMLARQMAAPNSPQWFNTG
LHWAYGIDGPAQGHYYVDHKSGKLTKSTSSYEHPQPHACFIQSVADDLVNDGGIMDLWVREARLFKYGSGTGTNFSSLRA
EGEALSGGGKSSGLMGFLKIGDRAAGAIKSGGTTRRAAKMVICDADHPDIEEFVNWKVKEEQKVASLVAGSKMHEAKLNE
IFAAIGEWDGLGEDAVDPTKNAALKSAIRAAKKVQIPETYIKRVLDYAKQGYASIEFPTYDTDWDSEAYNSVSGQNSNNS
VRVTDAFLKAVKDDADWELIRRTDGKVAKTIKARELWETIGHAAWACADPGIQFHDTVNDWHTCPEDGAIRGSNPCSEYM
FLDDTACNLASMNLLTFYRDGKFDSEGYMHAARLWTLTLEISVLMAQFPSKEIAQRSYDFRTLGLGYANIGGLLMNMGYG
YDSDEGRALCGALTAIMTGVSYATSAEIAAEVGPFPGYAKNADHMLRVIRNHRNAAYGKTDGYEALATKPVALDHANCPD
QTLVKLAMSSWDEALKLGEQHGYRNAQATVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRSVPAALDTL
GYSSAQIEEIIAYAVGHGTLGNAPGVNHTALIGHGFGPEQIEKIEAALPSAFDIRFVFNQWTLGEAFCTEVLGIPAAKLN
DPTFDMLRHLGFAKKDIDLANDHVCGTMTLEGAPFLKAEHYSVFDCANPCGKRGKRFLSVDSHIHMMAAAQSFISGAISK
TINMPNDATIEDCQKAYELSWSLGTKANALYRDGSKLSQPLAAALVEDDEEAAEVLETGSTMEKAQVIAEKIVEKVVIKE
VIKAHREKLPERRKGYTQKAIVGGHKVYLRTGEYADGNLGEIFIDMHKEGAGFRAMMNNFAIAVSVGLQYGVPLEEFVDA
FTFTKFEPAGMVQGNDSIKNATSILDYIFRELAVSYLDRTDLAHVAPQGATFDDIGRGEEEGVSNVKEMSDSAASKSLEV
LKQISSTGYLRKRMPQELVVLQGGGKPVTAEIPVVGTIGGGEVATMTALRSETTVATTTSIDPRAKAKMQGYEGEACGEC
GNYTLVRNGTCMKCNTCGGTSGCS

Sequences:
NA

Specific function: NA

COG id: COG0209

COG function: function code F; Ribonucleotide reductase, alpha subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA