| Definition | Dinoroseobacter shibae DFL 12 chromosome, complete genome. |
|---|---|
| Accession | NC_009952 |
| Length | 3,789,584 |
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Identifier: 159044314
GI number:
Start: 1830691
End: 1832526
Strand: Reverse
Name: Not Available
Synonym: Dshi_1765
Alternate gene names: NA
Gene position: NA
Preceding gene: 159044315
Following gene: 159044311
Centisome position: NA
GC content: NA
Gene sequence:
>1836_bases ATGCGTGGTGCCCGGCTTTCCGATCCTCCCCCTGAAGACCTCGAGAACCGTCGCCGCGGTCTGTTGGTGATCCGCAAGGT GGCGCCGTATCTGTGGCCCGATGACAAGCCTTGGGTGAAGCGGCGTGTGGTGCTAGCGATGGCGGCACTGTTCCTGGCCA AGCTGATCGCGGTGGGCACGCCGTTCTTGTACAAAACCGCCGTCGACTCCCTCGCGGGGGAGGTGTCGGACGGTGTGCTT CTGGCGATCGGGGCGGTGGGGCTGACCATCGCCTATGGCATGGCGCGGCTGATGACCGTCGGCTTCCAGCAGCTGCGCGA CGTGATCTTTGCCAAGGTCGCGCAGCGGGCCCTGCGGACCTTGGCGCTGGAGACCTTCACCCATATCCACCGGCTTTCGA TGCGCTACCACATCACGCGCAAGACCGGGGGGCTGAGCCGGATCATCGAGCGCGGGGTGAAGGGGGTCGAATTCCTGCTG CGGTTCCTGCTGTTCTCCATCGGGCCGCTGATCCTGGAACTGGCGCTGATCTCAATCATTCTGACGCTCTATTTCGACGC CTGGTACCTGGCGGCGGTGGCGGGGACCATTGCGCTCTATGTCGGGTTCACCTTTAAGGTGACGGAATGGCGGGTGCGCA TCCGGCGAGAGATGAACCGTCAGGACACCGATGCCAACCAGAAGGCCATCGACAGCCTGCTGAATTTCGAGACGGTGAAG TATTTCGGCGCCGAGACGCGGGAGGCGGAGCGCTACGACGCGGCAATGGAGGGCTATGAGGCAGCAGCGCTCAAGACCTC CTACACGCTGGGGTTCCTGAATTTCGGCCAATCGGTGCTGATCACCGGGGGGCTGGTCGTCGTCATGGTCATGGCCGCGA TGGGAGTGCAGCGCGGGGATCTGACCGTGGGTGATTTCGTCATGGTCAATGCGTACATGTTGCAGATCACGCAACCGCTG AACTTTCTCGGCACCGTCTACCGCGAGATCCGTCAGGCACTGATCGACATGGGCGAGATGTTTGAGCTGCTGGAGCAGCC AGCCGAGGTGCAGGACAAGCCCGGCGCGCACGACCTGCGGGTCACCGGGGGGGAGATCGTGCTCGACGATGTGGTCTTCG GCTATGACCCGGCGCGGCCGATCCTGAAGGGTGTGAGCCTGCGTGTCGGAGCGGGACAGACGCTGGCGCTGGTGGGACCG TCGGGGTCGGGCAAGTCGACCATCGGGCGGCTCCTGTTCCGGTTCTACGATGTAAGCGAGGGCGCGCTGCGGATCGACGG GCAGGATGTGCGCGACGTCACCCAGGACAGCCTGCATGCGCAGATCGGCGTGGTGCCGCAGGACACGGTGCTGTTCAACG ACACGATCCTCTACAACATCGCCTATGGCCGCCCCGAGGCCAGCCGGTCCGAGATCGAGGCCGCGGCGAAGGCGGCGGAG ATCCACGAATTCATCTACAGCCTGCCCGAGGGCTACGAGACCAAGGTGGGCGAGCGGGGGCTCAAGCTTTCGGGCGGGGA AAAGCAGCGCGTGGGCATCGCGCGGACCCTGCTGAAGAACCCGCCGATCCTGCTGCTGGACGAGGCGACCTCGGCGCTCG ACAGCGAGACGGAGCGGGACATCCAGGACAGTCTGGCGGCCATGGGGCAGGGGCGCACGGTGATCACCATTGCGCACCGT CTGTCCACGGTGGTCGATGCGGACCGGATCGTGGTGCTGGAGAACGGCGTGATCGTCGAAGAGGGCACCCATGACGAGCT GCTGGCCCGGGGCGGGCGCTATGCCTCCATGTGGACCCGGCAGCAAAGCGAAGATGCCGAAGAGGACGCGGCCTGA
Upstream 100 bases:
>100_bases TGATCTATCCGGGCCAGGTCTTTGCCGTGCCGCGCGAGACCCCCTGACGGGCGTTTACGCCGCACTGGCCATTCGCGGGC ACGACTTCTAGGGTGCGGTC
Downstream 100 bases:
>100_bases TCAGGCCGGCGCCAGGAAGGCCGGTCTGCGATAGTGCCCGAGGTCAGCCATCGCGGCCTCCAGGTCGGTCTGAACGGTGA TGCGCGGGGCATTGAGGTTC
Product: putative multidrug export ATP-binding/permease
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>611_residues MRGARLSDPPPEDLENRRRGLLVIRKVAPYLWPDDKPWVKRRVVLAMAALFLAKLIAVGTPFLYKTAVDSLAGEVSDGVL LAIGAVGLTIAYGMARLMTVGFQQLRDVIFAKVAQRALRTLALETFTHIHRLSMRYHITRKTGGLSRIIERGVKGVEFLL RFLLFSIGPLILELALISIILTLYFDAWYLAAVAGTIALYVGFTFKVTEWRVRIRREMNRQDTDANQKAIDSLLNFETVK YFGAETREAERYDAAMEGYEAAALKTSYTLGFLNFGQSVLITGGLVVVMVMAAMGVQRGDLTVGDFVMVNAYMLQITQPL NFLGTVYREIRQALIDMGEMFELLEQPAEVQDKPGAHDLRVTGGEIVLDDVVFGYDPARPILKGVSLRVGAGQTLALVGP SGSGKSTIGRLLFRFYDVSEGALRIDGQDVRDVTQDSLHAQIGVVPQDTVLFNDTILYNIAYGRPEASRSEIEAAAKAAE IHEFIYSLPEGYETKVGERGLKLSGGEKQRVGIARTLLKNPPILLLDEATSALDSETERDIQDSLAAMGQGRTVITIAHR LSTVVDADRIVVLENGVIVEEGTHDELLARGGRYASMWTRQQSEDAEEDAA
Sequences:
NA
Specific function: NA
COG id: COG5265
COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA