Definition Dinoroseobacter shibae DFL 12 chromosome, complete genome.
Accession NC_009952
Length 3,789,584

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Identifier: 159043541

GI number:

Start: 1017620

End: 1020436

Strand: Reverse

Name: Not Available

Synonym: Dshi_0992

Alternate gene names: NA

Gene position: NA

Preceding gene: 159043544

Following gene: 159043540

Centisome position: NA

GC content: NA

Gene sequence:

>2817_bases
ATGCACCGTAAGGCCGGATTGATCCCCGCCCCTCGGCATGTGCCGGCGTGGGATGACCTGACCGGACCGGAACAGATGGC
CATGTTGACCGAGGTGGGTGCGGCACTTGGCCGAGGCACAGCCGGTTTCATCGCCTCATCCGATCACGATCATTTCCACC
TGCGGGAAGCCAGTGGCGCTCGCCTGACAACCGGCGGTCGCGATCCGCTCCTGCCGTTGCTCGCCGAACGGCTGGACACG
GCGCAATCAGTCGACCTTGCGATTGCTTTCGCAATGGACAGCGGCGTGGCCTTGCTTGAGCCCTGGTTCCGGGAGCTGCT
AGCGCGTGGTGGACGGCTCAGAATCGTGGTGGGCGACTATCTCGACACGACCGACCCGACGGCGTTGGCGCGCCTGCTGG
ACCTGGAAGGCGCCGAGCTCTTCGTGTTCGAAACGGGAGGCCTCAGCTTTCACCCGAAGGCCTGGCTGTTCCGTGCCGCC
GATGCGCGCGGGGCGGCGATTGTCGGCAGCTCGAACCTGTCTCAATCGGCGCTGACCGATGGCGTGGAATGGAACCTGCA
TTCCGAGGATGCAGCAGACAGCGTCGGAGCGGCCTTCAAGGACCTGCTGGCGCGACCTGAGGTTAAACCTTTGACGGCCG
CATGGGTCGATGCCTACGCGAAACGCCGCAGGGCGCGGCCGATGCCCGAGTTCACCGCCCGCGTCGTCGCCGAAGAAGGC
CCGCCGCCAGAGCCGCACACGATCCAGCAGGAGGCGCTGGCGGCGCTTGCACAAAGCCGATCAAAGGGCCACCGCGCCGG
GCTTGTCGTGCTGGCCACCGGGCTGGGCAAGACCTGGCTGGCCGCCTTTGACACGATCCGTGCGATGGCGGGCCGCATCC
TTTTCGTCGCCCATCGCGACGAAATTCTGACCCAAGCGATGGCGGCCTTTCGCAAGGTCCGCCCAGACGCCAAGCTCGGC
CGCTACACGGGTGCCGAGAAAGAAGCGGACGCGGAAATCCTCTTCGCCTCGGTCCAGACGCTGGGCCGGATCGGTCACCT
GCGCCAATTCGACCGGGATCATTTCGACTACATCGTGGTCGATGAATTCCACCATGCCGCCGCCCGCACCTATCAGAAGC
TGATCGAGCATTTCACGCCCGGCTTCCTGTTGGGCCTCACCGCAACGCCAGACCGGACGGATGGCGCCGACTTGCTTGGC
CTTTGCAGCGAAAACCTCGTCTACGAATGCGACCTGTTTCGCGGGATCGACGCTGGGCACCTGTCGCCCTTCCACTACTT
CGGTGTGCCGGATGACGTGGATTACGCACAGATCCCCTGGCGCTCCGGCCAGTTCGATCCGACCGCACTAGACGCAGCTC
TAGCCACCGAGGCGCGAGCGCTTAACGCGCTGGACCAATACCGCAAACGTGCAAGCGGCCCCGCGATCGGCTTTTGCTGT
TCCGTGCGCCACGCCGACTACATGGCCGAGTACTTTCGCACCGCCGGGTTGAACGCAATCGCGGTCCATTCGGGCCAAAG
CTCCGCGCCGCGGGCAAGTTCCCTGGCAGCGCTCGGTCGCGGCGAGATCGACATCCTCTTCGCGGTCGACATGTTCAACG
AAGGCGTGGACGTGCCCGAGATCGGCACCGTCCTGATGCTACGCCCGACCGAAAGCGCGATTATCTGGCTGCAGCAACTC
GGCCGCGGCCTGCGCCGCGTCGAAGGCAAGGTGCTGCAGGTGATCGACTATATCGGCAACCACCGCAGCTTCCTGACTAA
AGTCGCGACCCTTCTGCGGGCCGGCGCAGGGGATCGCTCGATCTCGACCAAACTGGACGCGCTCCAGGCCGGTGAATTCC
AGATGCCCAAGGGCTGCGAGATCACCTATGAGCTGCAGGTCATCGACATCTTGCGCAATCTCCTCCGCCCGAAGGAAGGC
GCGGCGGAGCTCGAAGCCTTCTTTGTCGACTTCCGGGACCGGACCGGCATCCGCCCCACGGCTGTCGAAGTCTTCCGCAA
CGGCTTCGATCCCCGCACATCGGGCCATGGCGGCTGGTTCGACTTCGTCCGGGACATGGGCGACGCCTTGCCCGAACGTC
CTTTCGCAACTCACGGTCGTCTCTTGGGTGAATTGGAACGGCCCAGGGGTTTGTCCCGATCCGCCTTGACCGGCTTGCGC
GACGTTGTAGCCGGGCGGCAACCGAGCGATGGCGCGTCAGAGCTGGCCTTCAACCCGCACCTGGCCCAAAGCAGCGACGG
CTTTCGGCTGGCGCGACCTGACGCTTCCGGAGAGCTGGAACCGCTTGTGCGCGAGTTGGTCGAATGGCGCTTGGCGGAAA
CGCCAATCGTCCGCGAGGCCGCCGAGGCGTCCGCGACCTTTGTCGGCAAGCCACAGGCTCTGGAGCTTTGGCAGCGCTAC
TACGTGCCGGACATCGCCGAGTTCTTTGGCGAAGAGTACAAGCAAAACGTCTGGCGCACCGGTATGAAGGCGCTGCCCGA
CCGGAAGATAATGATCCTTCTGGCAAATGTGTCGACCCAGGACCTGACCTACGAGAACGCGTTTCTCAGCCCGTCACGGC
TGAAATGGTTCAGCCAGAACCAGACGCGCCAGGACAGCAAGCATGGCCGGGTCATCAGCGGTGAGGAAGGCCACGAGGTC
CACATGTTCATCCGCCGCGGGAACAAGGTGAACGGCAAGGTCAACCCATTCATCTACTGCGGGCAACCCAGGTTCGCCGG
ATGGCAGGGTGAGAAGCCAATTGAAGTACAATGGGAATTGGCTTCACCAGCACCGCGCGAGCTTTGGGCGGAGCTCGGAA
TTCCAAATCAAGACTGA

Upstream 100 bases:

>100_bases
AGCACCTGGACATGCCAGCGGCGATCCTTACCAATGGTCTCAGTAGAGAAGGTCAATCTGGACGAGTGTGACTGACCCGC
GCCTCACCTGCCCGATCTGC

Downstream 100 bases:

>100_bases
TAGCTTAAAAGAATTCAGTTTGACGTTGCCCCTGGGGGCATAGGAAGACAACAGCACATGGGAACCAGGGAGCGGCAAGG
ACTGATTTCACGCTTTTTCT

Product: type III restriction protein res subunit

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>938_residues
MHRKAGLIPAPRHVPAWDDLTGPEQMAMLTEVGAALGRGTAGFIASSDHDHFHLREASGARLTTGGRDPLLPLLAERLDT
AQSVDLAIAFAMDSGVALLEPWFRELLARGGRLRIVVGDYLDTTDPTALARLLDLEGAELFVFETGGLSFHPKAWLFRAA
DARGAAIVGSSNLSQSALTDGVEWNLHSEDAADSVGAAFKDLLARPEVKPLTAAWVDAYAKRRRARPMPEFTARVVAEEG
PPPEPHTIQQEALAALAQSRSKGHRAGLVVLATGLGKTWLAAFDTIRAMAGRILFVAHRDEILTQAMAAFRKVRPDAKLG
RYTGAEKEADAEILFASVQTLGRIGHLRQFDRDHFDYIVVDEFHHAAARTYQKLIEHFTPGFLLGLTATPDRTDGADLLG
LCSENLVYECDLFRGIDAGHLSPFHYFGVPDDVDYAQIPWRSGQFDPTALDAALATEARALNALDQYRKRASGPAIGFCC
SVRHADYMAEYFRTAGLNAIAVHSGQSSAPRASSLAALGRGEIDILFAVDMFNEGVDVPEIGTVLMLRPTESAIIWLQQL
GRGLRRVEGKVLQVIDYIGNHRSFLTKVATLLRAGAGDRSISTKLDALQAGEFQMPKGCEITYELQVIDILRNLLRPKEG
AAELEAFFVDFRDRTGIRPTAVEVFRNGFDPRTSGHGGWFDFVRDMGDALPERPFATHGRLLGELERPRGLSRSALTGLR
DVVAGRQPSDGASELAFNPHLAQSSDGFRLARPDASGELEPLVRELVEWRLAETPIVREAAEASATFVGKPQALELWQRY
YVPDIAEFFGEEYKQNVWRTGMKALPDRKIMILLANVSTQDLTYENAFLSPSRLKWFSQNQTRQDSKHGRVISGEEGHEV
HMFIRRGNKVNGKVNPFIYCGQPRFAGWQGEKPIEVQWELASPAPRELWAELGIPNQD

Sequences:
NA

Specific function: NA

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA