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The map label for this gene is padR [H]

Identifier: 158425626

GI number: 158425626

Start: 4568939

End: 4569625

Strand: Reverse

Name: padR [H]

Synonym: AZC_4002

Alternate gene names: 158425626

Gene position: 4569625-4568939 (Counterclockwise)

Preceding gene: 158425628

Following gene: 158425623

Centisome position: 85.1

GC content: 66.96

Gene sequence:

>687_bases
GTGCTGTCGTTGTATCGTAAGATACATCATAAGGAGCAAAGACACATGTTTGGATGCAGACACCATGGGCGCGAGGAGCG
CTTTGCGGCCGGTGGCCGGGGTGAGTTTGGCGGCGGCTTCGGTGGCGGCTGGGGCCGTGGCCGGCGCGGCGGCGGTGGGT
TCGGCGGCGGCGGCGGCGGGGATTTCTTCCGCATCGGCCGGATGCTGGCGCAGGGCGATCTCAAGCTTCTGGCGCTGAGC
CTCATCGCCGAGCAGCCGCGCCACGGCTACGAGATCATCAAGCTGATCGAGGAGAAGACCGGCGGCTGGTATTCGCCGAG
CCCGGGCGTGGTCTACCCGACCCTGACCTTCCTTGAGGAAGCGGGTTATGTGACGGCCGAGCCGGACGGCGCCAAGAAGC
GCTTCACCATCACGGAAGAAGGCCGCGCCTATCTCGAAGAGAACAAGGACGTGGCGGACGCGCTGGTGGGCCGCCTGTCG
GAGATCGGCCTCAAGGTCGGCAAGATGCGCCGCTGGATGGGCAAGGGCGAAGAGGGCGGCGAGCCGTCCGGACTGCCCCG
CCTCGTGGACGCGGCCATCGAGAACCTGAAGGACGTGGCGAAGGCCAAGCTGGCCGAGAACCCGCGCACGGAAACGCGCA
TCGTGGAAATCCTCGCCGGCGTCGCCAACGACCTGCGCGAGGTCTGA

Upstream 100 bases:

>100_bases
CCACATCCGACATGGCCATGGCTGTTCTCCTGACGCGGCCACCTTAGCCCGCGAAAATTAACGGTGCCCCTCTTGCGTCC
AGATATATCGAAAGATATAT

Downstream 100 bases:

>100_bases
GCGGCCTCAAGCGCCGCAGCGACGCCGGACGGGTCGGACGCGACCCGCCCGGCGCCTGTCGCACAAAAGGGTGAGGCTCA
GGCCCCTGCCACAAAAGGGG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MLSLYRKIHHKEQRHMFGCRHHGREERFAAGGRGEFGGGFGGGWGRGRRGGGGFGGGGGGDFFRIGRMLAQGDLKLLALS
LIAEQPRHGYEIIKLIEEKTGGWYSPSPGVVYPTLTFLEEAGYVTAEPDGAKKRFTITEEGRAYLEENKDVADALVGRLS
EIGLKVGKMRRWMGKGEEGGEPSGLPRLVDAAIENLKDVAKAKLAENPRTETRIVEILAGVANDLREV

Sequences:

>Translated_228_residues
MLSLYRKIHHKEQRHMFGCRHHGREERFAAGGRGEFGGGFGGGWGRGRRGGGGFGGGGGGDFFRIGRMLAQGDLKLLALS
LIAEQPRHGYEIIKLIEEKTGGWYSPSPGVVYPTLTFLEEAGYVTAEPDGAKKRFTITEEGRAYLEENKDVADALVGRLS
EIGLKVGKMRRWMGKGEEGGEPSGLPRLVDAAIENLKDVAKAKLAENPRTETRIVEILAGVANDLREV
>Mature_228_residues
MLSLYRKIHHKEQRHMFGCRHHGREERFAAGGRGEFGGGFGGGWGRGRRGGGGFGGGGGGDFFRIGRMLAQGDLKLLALS
LIAEQPRHGYEIIKLIEEKTGGWYSPSPGVVYPTLTFLEEAGYVTAEPDGAKKRFTITEEGRAYLEENKDVADALVGRLS
EIGLKVGKMRRWMGKGEEGGEPSGLPRLVDAAIENLKDVAKAKLAENPRTETRIVEILAGVANDLREV

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789452, Length=208, Percent_Identity=31.7307692307692, Blast_Score=91, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 24836; Mature: 24836

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSLYRKIHHKEQRHMFGCRHHGREERFAAGGRGEFGGGFGGGWGRGRRGGGGFGGGGGG
CHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
DFFRIGRMLAQGDLKLLALSLIAEQPRHGYEIIKLIEEKTGGWYSPSPGVVYPTLTFLEE
HHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHH
AGYVTAEPDGAKKRFTITEEGRAYLEENKDVADALVGRLSEIGLKVGKMRRWMGKGEEGG
CCCEEECCCCCCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EPSGLPRLVDAAIENLKDVAKAKLAENPRTETRIVEILAGVANDLREV
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLSLYRKIHHKEQRHMFGCRHHGREERFAAGGRGEFGGGFGGGWGRGRRGGGGFGGGGGG
CHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
DFFRIGRMLAQGDLKLLALSLIAEQPRHGYEIIKLIEEKTGGWYSPSPGVVYPTLTFLEE
HHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHH
AGYVTAEPDGAKKRFTITEEGRAYLEENKDVADALVGRLSEIGLKVGKMRRWMGKGEEGG
CCCEEECCCCCCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EPSGLPRLVDAAIENLKDVAKAKLAENPRTETRIVEILAGVANDLREV
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]